New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP043523	1 =	0 (0.000)	7415 (14.160)	88/298	16.4	100%	intergenic (–/+2)	–/FTN78_chr0001	–/Mobile element protein
	?	CP043523	= 2416272	0 (0.000)					intergenic (+231/–)	FTN78_chr2511/–	tRNA‑Leu/–
Rejected: Coverage evenness skew score above cutoff.

ACAGAGTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATC‑‑‑‑‑‑‑  >  CP043523/2416123‑2416272                                                                                                                                                      |        aCAGAGTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATc         >  1:1613083/1‑150 (MQ=255) aCAGAGTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATc         <  1:4058852/150‑1 (MQ=255) aCAGAGTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATc         <  2:2527966/150‑1 (MQ=255) aCAGAGTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATc         <  2:1879251/150‑1 (MQ=255) aCAGAGTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATc         <  2:1879381/150‑1 (MQ=255)  cAGAGTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATcc        <  2:4521298/150‑2 (MQ=255)  cAGAGTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATcc        >  2:2562162/1‑149 (MQ=255)  cAGAGTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATcc        <  2:2108308/150‑2 (MQ=255)   agagTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATcca       >  2:3921350/1‑148 (MQ=255)   agagTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATcca       <  2:1522042/150‑3 (MQ=255)    gagTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATccaa      >  1:1104169/1‑147 (MQ=255)     agTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATccaat     >  2:596639/1‑146 (MQ=255)     agTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATccaat     >  2:595575/1‑146 (MQ=255)     agTTTTGATATCAAATCAAGTGACCTGAATACACTTGATTTTATTATAAATTGTTATTTTCGCAAATTGCTAGTACAAGTTAGCCAGCCAAGGTCATCTCATATGATGTCTTATAGTTAAACATTTTTCTTGGATAATGGTTCATccaat     >  2:3542324/1‑146 (MQ=17)      gTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATccaata    <  1:1611506/150‑6 (MQ=255)      gTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATccaata    >  1:72772/1‑145 (MQ=255)      gTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATccaata    >  1:2657904/1‑145 (MQ=255)      gTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATccaata    >  1:2654482/1‑145 (MQ=255)      gTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATccaata    <  1:1801600/150‑6 (MQ=255)      gTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATccaata    <  1:1784212/150‑6 (MQ=255)      gTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTAATccaata    >  2:2289007/1‑145 (MQ=255)       ttttGATATCAAATCAAGTGTGTTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGACCAAGTTAGCCAGCCAAGCACATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGCATAATGGTTCATccaatac   >  2:810811/1‑144 (MQ=18)        tttGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGGACATTTTTCTTGGATAATGGTTCATccaatact  <  1:1845982/150‑8 (MQ=255)        tttGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATccaatact  >  2:1563816/1‑143 (MQ=255)        tttGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATccaatact  <  2:3893930/150‑8 (MQ=255)                                                                                                                                                      |        ACAGAGTTTTGATATCAAATCAAGTGTATTCAGGTCACTTGATTTTTTTATAAATTGTTATTTTCGCAAATTGCAAGTCCAAGTTAGCCAGCCAAGCTCATCTCATATGAACTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATC‑‑‑‑‑‑‑  >  CP043523/2416123‑2416272

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.