Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP043523 | 2,059,842 | 0 | G | T | 61.1% | 674.4 / inf | 946 | S373S (TCC→TCA) | FTN78_chr2133 | D‑alanyl‑D‑alanine carboxypeptidase |
Reads supporting (aligned to +/- strand): ref base G (168/199); new base T (281/296); total (451/495) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.86e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.67e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 951 total aligned reads displayed.
AAAACCTTTGGAGCGCTACTACGGGGGACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAA > CP043523/2059693‑2059991 | ccTTTGGAGCGCTACTACGGGGGACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAgg > 2:3758517/1‑150 (MQ=255) ccTTTGGAGCGCTACTACGGGGGACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAgg > 1:498910/1‑150 (MQ=255) cTTTGGAGCGCTACTACGGGGGACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGc < 2:2352632/150‑1 (MQ=255) cTTTGGAGCGCTACTACGGGGGACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGc < 1:1267703/150‑1 (MQ=255) ttGGAGCGCTACTACGGGTGACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTg < 2:207177/150‑1 (MQ=255) ttGGAGCGCTACTACGGGGGACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTg > 1:2053844/1‑150 (MQ=255) tGGAGCGCTACTACGGGGGACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGt > 1:1872088/1‑150 (MQ=255) nggAGCGCTACTACGTGGTACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGCTAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGCGACAAGTTTTTAGTGTTTAGTCACAGTTGCTTCAAAGGAGGCTGt > 2:296702/2‑150 (MQ=255) ggAGCGCTACTACGGGGGACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGtt > 2:3432210/1‑150 (MQ=255) ggAGCGCTACTACGGGGGACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGtt < 1:1650489/150‑1 (MQ=255) gcgcTACTACGGGGGACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGttttt < 2:1547423/150‑1 (MQ=255) cgcTACTACGGGGGACAGTTTTCTTAGCAGCCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGtttttt < 1:3537209/150‑1 (MQ=255) cgcTACTACGGGGGACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGtttttt > 1:4401585/1‑150 (MQ=255) actacGGGGGACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCtt < 2:772816/150‑1 (MQ=255) tacGGGGGACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTAc < 1:2140260/150‑1 (MQ=255) tacGGGGGACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTAc > 2:2243404/1‑150 (MQ=255) cGGGGGACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACtt < 2:2587039/150‑2 (MQ=255) gggggACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGa < 1:1000692/150‑1 (MQ=255) ngggACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATGTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGaa > 1:134014/2‑150 (MQ=255) ggggACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGaa < 1:321835/150‑1 (MQ=255) gggACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAAt > 1:587747/1‑150 (MQ=255) ttCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTc < 1:3637583/150‑1 (MQ=255) tCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCa < 2:2452127/150‑1 (MQ=255) cTTAGCAACCAATGGAATTTTTTCTGCGGTACAGTTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAg < 2:1148756/150‑1 (MQ=255) cTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAGAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAg < 1:2351651/150‑1 (MQ=255) cTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAg < 1:2491366/150‑1 (MQ=255) cTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAg > 1:3962810/1‑150 (MQ=255) ttAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGt < 1:1089276/150‑1 (MQ=255) aGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGGGACGAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGa > 2:4192754/1‑150 (MQ=255) aaCCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGAttt > 2:612819/1‑150 (MQ=255) cAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGt > 2:281561/1‑150 (MQ=255) aaTGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTa < 2:4476541/150‑1 (MQ=255) aTGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTAt > 1:3888726/1‑150 (MQ=255) aTGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTAt > 1:2208670/1‑150 (MQ=255) aTGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTCTTCCTTACTGAATTTGACTGTCAGTGATTTTGTan < 2:4286311/150‑2 (MQ=255) aaTTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGc < 1:429540/150‑1 (MQ=255) tttGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCAc < 1:2269079/150‑1 (MQ=255) gTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACCGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTAc > 2:1618600/1‑150 (MQ=255) ttCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTAcc > 1:3160832/1‑150 (MQ=255) ttCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTAcc < 2:1428869/150‑1 (MQ=255) cTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCAt < 1:3083385/150‑1 (MQ=255) cTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCAt < 1:464265/150‑1 (MQ=255) tGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATc > 1:2539360/1‑150 (MQ=255) tGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATc < 2:2540386/150‑1 (MQ=255) tACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTATTTTCTTTTTCTTCAACTGAGGCTGTTTTTTTTTTACTTAATTTTACTGTCAGTGATTTTGTTTTTTCTCTACCATCTGTAg > 2:832002/1‑150 (MQ=255) tACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAg < 2:893991/150‑1 (MQ=255) tACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAg > 1:4179968/1‑150 (MQ=255) aaTTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTTTTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCATTGATTTTGTATCTGCACTACCATCTGTAGcat > 2:3328795/1‑148 (MQ=255) aaTTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGt > 1:3458267/1‑150 (MQ=255) aTTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTa < 1:1213856/150‑1 (MQ=255) tttGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCGACTGAGGCTGATTTTTTCTTACTGAATTAGACTGTCAGTAATTTTGTATCTGCACTACCATCTGTAGCATaa > 2:4110784/1‑150 (MQ=255) ggAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGa > 2:2300354/1‑150 (MQ=255) gAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGaa > 1:2872786/1‑150 (MQ=255) gAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGaa > 2:4547178/1‑150 (MQ=255) aGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGaaca > 2:26644/1‑150 (MQ=255) aGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGaaca > 1:76077/1‑150 (MQ=255) aTAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGaacaac < 1:17429/150‑1 (MQ=255) tAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACg > 1:2821020/1‑150 (MQ=255) gCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACggg < 1:2936743/150‑1 (MQ=255) ccTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGa < 1:4018107/150‑1 (MQ=255) cTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAg > 2:3994804/1‑150 (MQ=255) aaCTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGa > 1:1459152/1‑150 (MQ=255) aCTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGat > 1:3352084/1‑150 (MQ=255) tATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGatat < 2:3534666/150‑1 (MQ=255) tATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAAAGGAGGCTGTTTTTTCCTTACTGCATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGatat < 2:1915222/150‑1 (MQ=255) aTCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATAtt > 2:3110305/1‑150 (MQ=255) tCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATAttt < 2:403140/150‑1 (MQ=255) ccTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATAtttt < 1:3782357/150‑1 (MQ=255) ccTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATAtttt > 1:2665473/1‑150 (MQ=255) ccTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATAtttt > 1:697439/1‑150 (MQ=255) aCTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGa < 2:1082251/150‑1 (MQ=255) aCTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGa > 1:299878/1‑150 (MQ=255) cTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAg > 1:553072/1‑150 (MQ=255) tGTAGTAGAAAGTGTGACAAGTTTTTGGTTTGTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGCCTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAgn < 2:4349965/150‑2 (MQ=255) gtagtaGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCa < 2:3929955/150‑1 (MQ=255) tagtagAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCaa > 1:657930/1‑150 (MQ=255) tagAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTTTTTTTTTTTTTTACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGa > 2:2754870/1‑150 (MQ=255) agAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAg < 2:2885608/150‑1 (MQ=255) aaaGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGtt < 1:3422582/150‑1 (MQ=255) agTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAAc > 2:1372816/1‑150 (MQ=255) gTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACa < 2:3039841/150‑1 (MQ=255) aGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGAgttt > 1:4088545/1‑150 (MQ=255) gTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGAttttt > 1:328327/1‑150 (MQ=255) tttttGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATttttc > 2:2157964/1‑150 (MQ=255) tttttGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATttttc > 1:2568384/1‑150 (MQ=255) ttGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATttttcttt < 2:491692/150‑1 (MQ=255) tGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATttttctttt > 1:1965932/1‑150 (MQ=255) ttttAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCat < 1:1578308/150‑1 (MQ=255) aGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCatcagt < 2:127325/150‑3 (MQ=255) aGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCatcaat > 1:909534/1‑150 (MQ=255) gTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCatcaatc > 2:1003435/1‑150 (MQ=255) cacaGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATcac > 2:1327938/1‑150 (MQ=255) acaGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTcaca < 2:1670096/150‑1 (MQ=255) cggTTGCTTTAACTGGGGCTGTTTTTGTCTTACTGGATTTGACTGTTCGTGATTTTGTATCTGCACTACCATCTTTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGACCAGATTTTTCTTTTCCATTAGTCACAg < 2:677981/148‑1 (MQ=255) aGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAgc < 1:4524433/150‑2 (MQ=255) aGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTACTTTACCATCAGTCACAgc < 2:1967462/150‑2 (MQ=255) gCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAAtt > 2:537124/1‑150 (MQ=255) cTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAAttt < 1:3836811/150‑1 (MQ=255) cAACGGAGGCTGTTTTTTTTTTTTTTTATTTGACTGTCAGGGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCtt > 2:3219459/1‑150 (MQ=255) cGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCGTGTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTaa < 2:1872088/150‑1 (MQ=255) | AAAACCTTTGGAGCGCTACTACGGGGGACAGTTTTCTTAGCAACCAATGGAATTTGTTCTGCGGTACAATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAA > CP043523/2059693‑2059991 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |