| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP043523 | 1,883,666 | G→T | intergenic (+69/‑85) | FTN78_chr1928 → / → FTN78_chr1929 | Transposase TnpA/Transposase TnpA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP043523 | 1,883,666 | 0 | G | T | 91.8% | 1828.0 / 111.9 | 606 | intergenic (+69/‑85) | FTN78_chr1928/FTN78_chr1929 | Transposase TnpA/Transposase TnpA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base T (253/303); minor base A (29/21); total (282/324) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01 | |||||||||||
Only 100 of 606 total aligned reads displayed.
TTATATCTCTATAGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGAAAAGTAAGTGATAGGATTGATGCCAAACTCGCCTGTGATACCTTAGAAATAGCTATAACTAAGAGGAAGCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCCTATGATAATGCCGTCACTGATGTCT > CP043523/1883519‑1883808 | atatCTCTATAGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTa < 1:2800587/150‑1 (MQ=255) atCTCTATAGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCGAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAg < 1:1412747/150‑1 (MQ=255) tctcTATAGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAgg < 1:497314/150‑1 (MQ=255) tctcTATAGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAgg > 1:1599230/1‑150 (MQ=255) ctctATAGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACGCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGa < 1:3459976/150‑1 (MQ=255) tataGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAAcc > 2:1155617/1‑150 (MQ=255) aGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAAt < 2:2141632/150‑1 (MQ=255) gAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTa < 2:547853/150‑1 (MQ=255) aGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTAt > 1:3818201/1‑150 (MQ=255) tAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCtt > 1:2866303/1‑150 (MQ=255) tAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCtt > 2:3052192/1‑150 (MQ=255) tAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCtt > 2:2618062/1‑150 (MQ=255) aaGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCttt > 1:3213614/1‑150 (MQ=255) aGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTc < 2:4153478/150‑1 (MQ=255) gCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCa < 2:815287/150‑1 (MQ=255) gACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCAtt > 1:675915/1‑150 (MQ=255) cATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCg < 1:711900/150‑1 (MQ=255) aTGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCgg < 2:1499948/150‑1 (MQ=255) aTGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCgg < 1:4571396/150‑1 (MQ=255) tGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGa > 2:4091078/1‑150 (MQ=255) gTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGCTGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTATGGAACCAATTATCTTTCATTCTGAt < 2:3805205/150‑1 (MQ=255) gTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGAt < 1:2024251/150‑1 (MQ=255) ttATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCa < 2:1882973/150‑1 (MQ=255) gtATCTCTGTCCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGCGATCGAATTGATGCCAAACTCGCCTGCAACGCGGTAGAGATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCa > 2:3221565/2‑150 (MQ=255) aTCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAg > 2:1778588/1‑150 (MQ=255) aTCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAg > 1:1005242/1‑150 (MQ=255) tctcTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAgg < 1:1749471/150‑1 (MQ=255) ctctGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGa < 2:621672/150‑1 (MQ=255) cTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAt < 2:1578330/150‑1 (MQ=255) tATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTGTAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAtt > 1:998969/1‑150 (MQ=255) tATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAtt < 2:1698789/150‑1 (MQ=255) aTTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAttt < 1:3103626/150‑1 (MQ=255) aTTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAttt < 2:3262693/150‑1 (MQ=255) ttCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTa < 1:3561996/150‑1 (MQ=255) cTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTaaa > 2:3123265/1‑150 (MQ=255) ttGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAAt < 2:1842968/150‑1 (MQ=255) aCCTCTACTCAAGGAAATGTATTGCGTGGAAAGTCAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAg < 1:4028297/150‑1 (MQ=255) ccTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGc > 1:4154801/1‑150 (MQ=255) ccTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGc > 2:360046/1‑150 (MQ=255) ccTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGc < 1:1242601/150‑1 (MQ=255) ctACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTc > 2:3932170/1‑150 (MQ=255) aCTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑t > 2:1450022/1‑150 (MQ=255) cAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTa < 2:2027132/150‑1 (MQ=255) aaGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAg < 1:3338078/150‑1 (MQ=255) ggAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGaa > 1:588630/1‑150 (MQ=255) gAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGaaa < 2:3718927/150‑1 (MQ=255) gAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGaaa > 1:4267276/1‑150 (MQ=255) gAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGaaa > 1:2659562/1‑150 (MQ=255) aaaTGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAg < 1:767811/150‑1 (MQ=255) aaTGTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGt < 2:297473/150‑1 (MQ=255) gTATTGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGttat < 1:1366015/150‑1 (MQ=255) ttGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAg > 2:403065/1‑150 (MQ=255) tGCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGa < 2:445790/150‑1 (MQ=255) gCGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGAt > 2:2881313/1‑150 (MQ=255) cGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATg < 1:552767/150‑1 (MQ=255) cGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATg > 1:4205976/1‑150 (MQ=255) cGTGGAAAGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATg < 1:1652652/150‑1 (MQ=255) tggaaaGTCAGTGATCGAATTCATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAg < 1:3857409/147‑1 (MQ=255) ggaaaGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGc < 2:1567966/148‑1 (MQ=255) ggaaaGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGc > 1:2365091/3‑150 (MQ=255) ggaaaGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGc < 2:1628291/148‑1 (MQ=255) ggaaaGTAAGTCATCGAAGTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTCTAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTACATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGc < 2:4377007/148‑1 (MQ=255) gaaaGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCa > 2:2738705/2‑150 (MQ=255) aaaGTAAGTGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCAt < 2:851842/150‑1 (MQ=255) aagtGATCGAATTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAAtt < 2:699997/150‑1 (MQ=255) ntcgaaTTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAAttgcttg > 1:303157/6‑150 (MQ=255) atcgaaTTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAAttgcttn < 2:3509885/145‑2 (MQ=255) atcgaaTTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAAttgcttg > 2:4287234/6‑150 (MQ=255) gaaTTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTgcttgctt > 2:1413179/3‑150 (MQ=255) gaaTTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTgcttgctt > 2:2774981/3‑150 (MQ=255) aaTTGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGcttc > 1:2054000/2‑150 (MQ=255) ttGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGcttctt > 2:3852164/1‑150 (MQ=255) tGATGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTA < 1:4341693‑M1/150‑1 (MQ=255) aTGCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACT > 1:1805639‑M1/1‑150 (MQ=255) gCCAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCC > 2:1329316‑M1/1‑150 (MQ=255) ccAAACTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCA > 2:2555419‑M1/1‑150 (MQ=255) aaCTCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttc > 1:4481666‑M1/1‑147 (MQ=255) cGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaaga > 2:925230‑M1/1‑143 (MQ=255) tgcgacaccttagAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagtt < 1:2930129‑M1/144‑12 (MQ=255) cgacaccttAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttca > 2:10554‑M1/5‑137 (MQ=255) agaaccgAAATAGCTATACATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAATCAACT‑AGCAATTC‑‑‑GGGTTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATcc < 1:1142977/144‑1 (MQ=255) ccTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaactct > 1:2217974‑M1/1‑132 (MQ=255) ttAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaactctct < 1:3718466‑M1/150‑21 (MQ=255) accgAAATAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAATCAACT‑AGCAATTCGGGT‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATcctta > 1:1498918/4‑147 (MQ=255) accgAAATAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAATCAACT‑AGCAATTCGGGT‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTa < 2:3577348/147‑1 (MQ=255) tAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaactctctt < 1:3779064‑M1/150‑22 (MQ=255) tAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaaccctctt > 1:2546503‑M1/1‑129 (MQ=255) cgAAATAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAATCAACT‑AGCAATTCGGGT‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATg > 2:3387144/2‑150 (MQ=255) gAAATAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAATCAACT‑AGCAATTCGGGT‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGa > 1:2169357/1‑150 (MQ=255) aaaTAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaactctcttgct < 1:3595889‑M1/150‑25 (MQ=255) aaTAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAATCAACT‑AGCAATTCGGGT‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATa > 1:243999/1‑150 (MQ=255) tAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaactctcttgctttg < 2:1247809‑M1/150‑28 (MQ=255) gCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaactctcttgctttgaa < 1:869981‑M1/150‑30 (MQ=255) cTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaactctcttgcttttaat > 2:666488‑M1/1‑120 (MQ=255) cTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAATCAACT‑AGCAATTCGGGT‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGcc > 2:2452319/1‑150 (MQ=255) tataAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaactctcttgctttgaata < 2:454127‑M1/150‑32 (MQ=255) aataaGAGGAATCCTAAGGAACCAATTATCTTTCATTCGTATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTATATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaactctcttgctttgaatacatc < 1:1982354‑M1/148‑36 (MQ=255) aataaGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaactctcttgctttgaatacatc < 2:2287223‑M1/148‑36 (MQ=255) agagGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaactctcttgctttgaatacatcgaac > 1:1923214‑M1/1‑111 (MQ=255) agagGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaactctcttgctttgaatacatcgaac < 1:1879385‑M1/150‑40 (MQ=255) | TTATATCTCTATAGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGAAAAGTAAGTGATAGGATTGATGCCAAACTCGCCTGTGATACCTTAGAAATAGCTATAACTAAGAGGAAGCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCCTATGATAATGCCGTCACTGATGTCT > CP043523/1883519‑1883808 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |