| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP043523 | 1,884,013 | A→G | intergenic (+59/‑306) | FTN78_chr1929 → / → FTN78_chr1930 | Transposase TnpA/Putative UV‑damage repair protein UvrX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP043523 | 1,884,013 | 0 | A | G | 83.8% | 1674.0 / 226.3 | 687 | intergenic (+59/‑306) | FTN78_chr1929/FTN78_chr1930 | Transposase TnpA/Putative UV‑damage repair protein UvrX |
| Reads supporting (aligned to +/- strand): ref base A (47/64); new base G (240/335); total (288/399) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 700 total aligned reads displayed.
AGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTAGTCCACCTAGGATTAAATTAAAAAAAGGAACACCGATATTTTCAACTTTTTTAAAACCAAATCTGATAACTTTATTGAAATGAACCAAGCCAAAGCCTGTCCTGTAAAAGACATTTGATTCATTCTCTGATAGGCTCGCCTTAAGTA > CP043523/1883864‑1884160 | agaagTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTa > 1:4385125/1‑150 (MQ=255)agaagTTCAACTCTCTTGCTTTGAATACATAGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAATTCAGAAAGAAGAAAATTATTTTAAGAAAATATAGTTCATTTTGTGTATAAATATTTGAAATTa > 2:3382142/1‑150 (MQ=255) gaagTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTAg > 2:2129527/1‑150 (MQ=255) gaagTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCGAAATATTTCACATTAg > 2:299643/1‑150 (MQ=255) aagTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTAGt < 2:2019868/150‑1 (MQ=255) aagTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTAGt < 2:4307708/150‑1 (MQ=255) aagTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTAGt > 2:2460007/1‑150 (MQ=255) gTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTAGTcc > 1:2175034/1‑150 (MQ=255) gTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAATTATTTTAAGAAAAGATAGATCATTTTGTGTCTAAATATTTGACATTAGGcc > 1:3308390/1‑150 (MQ=255) gTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTACGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTcc < 2:3045432/150‑1 (MQ=255) tCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAt > 1:3381044‑M2/1‑149 (MQ=255) tCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTAGTCCaa > 1:4114625/1‑149 (MQ=255) cAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTAGTCCaaa < 2:2177144/150‑3 (MQ=255) cAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTACGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCaga > 2:1969962/1‑148 (MQ=255) aaCTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTAGTCCaaat < 1:263908/150‑4 (MQ=255) aaCTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTACGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCagaa > 2:4424777/1‑147 (MQ=255) nctctctTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTAGTCCaaata > 1:720358/2‑146 (MQ=255) aCTCTCTTGCTTTGCATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTAGTCCaaata > 1:4283139/1‑146 (MQ=255) aCTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTACGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCagaaa > 1:640206/1‑146 (MQ=255) ctctctTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTAGTCCaaatat > 1:3759757/1‑145 (MQ=255) ctctctTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTACGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCagaaac < 2:1923929/150‑6 (MQ=255) tctctTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTAGTCCaaatatt > 2:578944/1‑144 (MQ=255) tctctTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTAGTCCaaatatt < 2:1553109/150‑7 (MQ=255) tctctTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAACGGTTTAACTCCAAATCAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTAGTCCaaatatt < 2:2827176/150‑7 (MQ=255) ctctTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTAGTCCaaatattg > 2:860321/1‑143 (MQ=255) ctctTGCTTTGAATACATCGAACAATTTTATAACAATTATAATACTCATTCCGCCAAGAAGGGTTTAACTCCAAATCAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTAGTCCaaatattg > 2:3884674/1‑143 (MQ=255) tctTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttcta > 1:1850599‑M2/1‑142 (MQ=255) ttGCTTTGAATACATCGAACAATTTTATAACTATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaag < 2:3953367‑M2/150‑11 (MQ=255) tGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTATAAAGATGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagt < 2:4169289‑M2/150‑12 (MQ=255) cTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagtta > 2:2364945‑M2/1‑137 (MQ=255) tttGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttag > 2:2957264‑M2/1‑136 (MQ=255) aaTACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagcc > 2:541439‑M2/1‑132 (MQ=255) aTCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcat > 2:2572302‑M2/1‑127 (MQ=255) tCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAAAAATGGTTTAACTCCAAATTAGAAAGAAGAAACTTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatc < 2:4026339‑M2/150‑25 (MQ=255) aTTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgtt > 2:2271065‑M2/1‑119 (MQ=255) tttATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttat > 1:1444619‑M2/1‑117 (MQ=255) tttATAACAATTATAAGCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttat > 1:2259760‑M2/1‑117 (MQ=255) aCAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaat < 2:10989‑M2/150‑40 (MQ=255) aaTTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatag < 2:2034959‑M2/150‑42 (MQ=255) aaTTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatag < 1:3801202‑M2/150‑42 (MQ=255) aTTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaataga < 1:3021706‑M2/150‑43 (MQ=255) tataATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagc > 2:961112‑M2/1‑106 (MQ=255) taATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccg < 1:4509812‑M2/150‑47 (MQ=255) aTCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgac > 1:1197832‑M2/1‑102 (MQ=255) tCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgaca > 1:3684914‑M2/1‑101 (MQ=255) tCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgaca < 2:4502285‑M2/150‑50 (MQ=255) cTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacacc < 2:1184169‑M2/150‑52 (MQ=255) cTCATTCCGCCAACAATGGTTTAAATCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacacc > 1:2740119‑M2/1‑99 (MQ=255) tCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccc < 2:488617‑M2/150‑53 (MQ=255) cATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacacccc < 1:3501320‑M2/150‑54 (MQ=255) ttCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccct > 2:3244469‑M2/1‑95 (MQ=255) ttCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccct > 2:1879154‑M2/1‑95 (MQ=255) tCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctg < 2:4273627‑M2/150‑57 (MQ=255) gCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgccc < 1:2142424‑M2/150‑60 (MQ=255) caacaaTGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccct > 1:4424196‑M2/1‑89 (MQ=255) aacaaTGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgccccta < 2:1621358‑M2/150‑63 (MQ=255) aaTGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctacca < 1:2099676‑M2/150‑66 (MQ=255) aaTGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctacca < 1:3975941‑M2/150‑66 (MQ=255) tttAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaa < 2:3605021‑M2/150‑71 (MQ=255) aCTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagtt < 1:2893269‑M2/150‑75 (MQ=255) cTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttg < 1:2435085‑M2/150‑76 (MQ=255) cTCCAAATTAGAAAGAACAAAATTATTTTACGAAAATATAGATCCTTTTGTGTCTAAAGATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggactacacccgacaccccctcctcctaccaataaaagttg < 2:1830810‑M2/150‑76 (MQ=255) cAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagc < 1:3911715‑M2/150‑79 (MQ=255) cAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagc < 1:115948‑M2/150‑79 (MQ=255) aaaTTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagca > 2:1735692‑M2/1‑71 (MQ=255) aaTTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcat < 1:3241328‑M2/150‑81 (MQ=255) aTTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatc > 2:1050513‑M2/1‑69 (MQ=255) gaaagaaGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataa > 2:2786604‑M2/1‑65 (MQ=255) aaagaaGAAAATTATTTTAAGAAAATATAGCTAATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtggtataggaatagagccgacaccccctgcacctaccaataaaagttgagcatcataag < 2:4360839‑M2/150‑87 (MQ=255) aagaagAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataagg < 1:310722‑M2/150‑88 (MQ=255) aaaTTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctacgttagagccgtcatctcgtgttataggaatagagacgataccccctgcccctaccaataaaagttgagcatcataaggcgtttta > 2:1673192‑M2/1‑56 (MQ=255) attattTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaat < 1:1964405‑M2/150‑97 (MQ=255) attattTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaat < 1:1512310‑M2/150‑97 (MQ=255) tattTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcc < 1:3568538‑M2/150‑99 (MQ=255) ttAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctg > 2:310997‑M2/1‑48 (MQ=255) aaTATAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttct < 2:2700588‑M2/150‑110 (MQ=255) atatAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttctt < 1:90902‑M2/150‑111 (MQ=255) atatAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttctt > 1:3466618‑M2/1‑40 (MQ=255) atatAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttctt < 1:866395‑M2/150‑111 (MQ=255) atatAGCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttctt < 1:1654595‑M2/150‑111 (MQ=255) gCTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatc > 2:691675‑M2/1‑35 (MQ=255) cTCATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatca > 2:37555‑M2/1‑34 (MQ=255) cATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatcact < 1:1032884‑M2/150‑119 (MQ=255) cATTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatcact < 1:2051741‑M2/150‑119 (MQ=255) aTTTTGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatcacta < 1:511687‑M2/150‑120 (MQ=255) ttttGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatcactaa < 1:2539786‑M2/150‑121 (MQ=255) tttGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatcactaag < 1:1825318‑M2/150‑122 (MQ=255) tttGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatcactaag > 2:2876573‑M2/1‑29 (MQ=255) ttGTGTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatcactaagc < 2:1445591‑M2/150‑123 (MQ=255) tgtgTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatcactaagcc > 2:3498935‑M2/1‑27 (MQ=255) tgtgTCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatcactaagcc < 2:2062343‑M2/150‑124 (MQ=255) tCTAAATATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatcactaagccaaat < 1:1365408‑M2/150‑128 (MQ=255) aaaTATTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatcactaagccaaattca > 2:1341048‑M2/1‑20 (MQ=255) atatTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatcactaagccaaattcaac < 1:2352929‑M2/150‑133 (MQ=255) atatTTGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatcactaagccaaattcaac > 1:3141166‑M2/1‑18 (MQ=255) tGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatcactaagccaaattcaacatcag > 2:4065210‑M2/1‑13 (MQ=255) tGACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatcactaagccaaattcaacatcag < 1:4065210‑M2/150‑138 (MQ=255) gACATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatcactaagccaaattcaacatcaga > 1:10989‑M2/1‑12 (MQ=255) cATTGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatcactaagccaaattcaacatcagacc < 2:3330637‑M2/150‑141 (MQ=255) ttGGTCCAtacttctaagttagagccgtcatctcgtgttataggaatagagccgacaccccctgcccctaccaataaaagttgagcatcataaggcgttttaatcctctgaacttcttgaatcactaagccaaattcaacatcagacaaa < 1:1317274‑M2/150‑143 (MQ=255) | AGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTTTAAGAAAATATAGCTCATTTTGTGTCTAAATATTTGACATTAGTCCACCTAGGATTAAATTAAAAAAAGGAACACCGATATTTTCAACTTTTTTAAAACCAAATCTGATAACTTTATTGAAATGAACCAAGCCAAAGCCTGTCCTGTAAAAGACATTTGATTCATTCTCTGATAGGCTCGCCTTAAGTA > CP043523/1883864‑1884160 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |