Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP043523 | 1,884,577 | T→A | S87T (TCA→ACA) | FTN78_chr1930 → | Putative UV‑damage repair protein UvrX |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP043523 | 1,884,577 | 0 | T | A | 99.8% | 1928.8 / NA | 578 | S87T (TCA→ACA) | FTN78_chr1930 | Putative UV‑damage repair protein UvrX |
Reads supporting (aligned to +/- strand): ref base T (0/1); new base A (302/275); total (302/276) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.78e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 583 total aligned reads displayed.
AATTTAAATCCTCTGACCACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAATCACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTCATTGAATCTTGGGCGAAACGCACGTGGATTGTTCCTCCACAAATGCAGCTCTATGTG > CP043523/1884430‑1884723 | aTTTAAATCCTCTGACCACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAacac < 1:309491/150‑1 (MQ=255) ttAAATCCTCTGACCACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGa > 1:1738849/1‑150 (MQ=255) tAAATCCTCTGACCACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGaa > 2:3220597/1‑150 (MQ=255) tAAATCCTCTGACCACTTCTCTTTGTGTCATGAGTCGAGCAGATCACTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGaa > 2:1152700/1‑150 (MQ=255) ctGACCACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAAt < 2:1708947/150‑1 (MQ=255) tGACCACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAAtt < 2:1612540/150‑1 (MQ=255) gACCACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTa > 2:54121/1‑150 (MQ=255) gACCACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTa > 1:779447/1‑150 (MQ=255) aCCACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTAt < 2:3095097/150‑1 (MQ=255) ccACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATc > 1:1066918/1‑150 (MQ=255) ccACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATc < 2:920307/150‑1 (MQ=255) ccACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATc > 1:2108160/1‑150 (MQ=255) aCTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCg > 2:3927633/1‑150 (MQ=255) aCTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCg > 2:3474088/1‑150 (MQ=255) ttCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCa < 1:468980/150‑1 (MQ=255) tctcTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCaa < 1:642604/150‑1 (MQ=255) ctctTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAAt < 1:2963959/150‑1 (MQ=255) ctctTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAAt < 1:1512597/150‑1 (MQ=255) ctTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATgg > 1:421878/1‑150 (MQ=255) tttGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGt > 2:1011261/1‑150 (MQ=255) tgtgTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTATAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAATCACGAAAGTTCAATTATCCGCAATGGTan < 1:2691257/150‑2 (MQ=255) gtCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGa > 1:339189/1‑150 (MQ=255) aGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACAt > 1:1446089/1‑150 (MQ=255) aGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACAt < 2:3403477/150‑1 (MQ=255) gTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATa < 2:2752989/150‑1 (MQ=255) tCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATAc < 1:2915653/150‑1 (MQ=255) gCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGAc < 1:4457479/150‑1 (MQ=255) gCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGAc > 2:3777315/1‑150 (MQ=255) aGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACAt < 1:1758371/142‑1 (MQ=255) aTCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTc < 1:700199/150‑1 (MQ=255) tCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCa < 2:3386979/150‑1 (MQ=255) tCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCa < 2:2941687/150‑1 (MQ=255) cATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCAt < 1:822483/150‑1 (MQ=255) cATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCGTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCAt > 1:3983671/1‑150 (MQ=255) tatacaGGGTCAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGCTTTTGGTATGAAAAATGCCAGTCGTGCCACCGATTTACCTTTTCTTATACAAACACGAACGCTCAATTATCCGCACTCGTATCGAACCCACACAGACACTCATggc > 2:2668541/6‑149 (MQ=255) atgggTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCGATGGTATCGAACACATACCGACCTTCATGGCCaac > 2:586593/3‑148 (MQ=255) aaGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGc > 2:1853608/1‑150 (MQ=255) ggTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGaa > 2:1543395/1‑150 (MQ=255) ggTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGaa < 2:2284360/150‑1 (MQ=255) gTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAAc < 1:3524078/150‑1 (MQ=255) gTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAAc > 2:2851878/1‑150 (MQ=255) gTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAAc < 1:4070070/150‑1 (MQ=255) ttAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTGACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGTCAGCGTACt < 2:3826083/150‑1 (MQ=255) tAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTg < 1:2372537/150‑1 (MQ=255) cGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAAc > 2:2620270/1‑150 (MQ=255) cGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAAc > 2:1995255/1‑150 (MQ=255) gCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAAcc > 1:1906400/1‑150 (MQ=255) gCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAAcc > 1:2502289/1‑150 (MQ=255) cTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCa > 2:434431/1‑150 (MQ=255) ttGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCaa < 1:3470665/150‑1 (MQ=255) tGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAAc < 1:2837898/150‑1 (MQ=255) gCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACt > 1:925168/1‑150 (MQ=255) gCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACt < 2:4493222/150‑1 (MQ=255) ccTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACtt > 1:1229012/1‑150 (MQ=255) tctAGTCCAACCTTTAAGAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTg < 2:4182464/150‑1 (MQ=255) tAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCa > 1:3149603/1‑150 (MQ=255) aGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCaa > 2:3547525/1‑150 (MQ=255) aaCCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGt < 2:852999/150‑1 (MQ=255) tAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCttt < 1:1695148/150‑1 (MQ=255) aaaaaGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCtttta < 1:3340994/150‑3 (MQ=255) aaaaGTTTTTTTTTTTTAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTAt > 2:3312587/1‑150 (MQ=25) aaaGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTAtt > 2:764171/1‑150 (MQ=255) tttGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCt > 1:2308379/1‑150 (MQ=255) ggTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTgg > 2:618661/1‑150 (MQ=255) tGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGa > 2:3006965/1‑150 (MQ=255) tGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGa < 2:1280051/150‑1 (MQ=255) tGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGa < 2:1765927/150‑1 (MQ=255) aaaaaTGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGaaa > 1:3752291/1‑150 (MQ=255) aaaaaTGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGaaa > 1:1997842/1‑150 (MQ=255) aaaaaTGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGaaa > 1:1616896/1‑150 (MQ=255) aaaaTGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAAc < 1:4538612/150‑1 (MQ=255) aaaaTGTCAGTCGTGCCAGCGATGTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAAc < 1:1154856/150‑1 (MQ=255) aaaTGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACg > 2:2534943/1‑150 (MQ=255) tGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCAc < 1:4133609/150‑1 (MQ=255) gTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACg < 1:2997197/150‑1 (MQ=255) tCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGt > 1:2562310/1‑150 (MQ=255) cAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTg > 2:240455/1‑150 (MQ=255) aGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTgg > 1:3829737/1‑150 (MQ=255) cGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGAtt < 2:1066918/150‑1 (MQ=255) tGCCAGCGATTTACCTTTTCTTAGAGAAACACGAAAGTTCAATTACCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGt < 2:168578/150‑1 (MQ=255) gCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGCACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGACTGtt > 2:3858279/1‑150 (MQ=38) cGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTtcctcc > 1:2628564/1‑150 (MQ=255) cGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTtcctcc > 1:3228602/1‑150 (MQ=255) gATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCACGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTtcctcct > 2:1491107/1‑149 (MQ=255) aTTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTtcctcctc > 1:3184342/1‑148 (MQ=255) aCCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAAt < 2:2155350/150‑1 (MQ=255) aCCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAAt < 2:2105670/150‑1 (MQ=255) cTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGc > 1:4323914/1‑150 (MQ=38) cTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGc < 1:1352461/150‑1 (MQ=255) cTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGc > 2:2702135/1‑150 (MQ=38) tttCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAg > 1:4393177/1‑150 (MQ=255) tCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGct < 2:3157531/150‑1 (MQ=255) ttATAGAAACACGAAAGTTCAATGACCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGctct < 1:3927633/150‑1 (MQ=255) ataGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTAt < 1:3650671/150‑1 (MQ=38) ataGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTAt < 1:54121/150‑1 (MQ=37) ataGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTAt < 1:222255/150‑1 (MQ=37) taGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTAtg < 1:1011261/150‑1 (MQ=37) taGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTAATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTAtg > 2:4062780/1‑150 (MQ=255) aGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTAtgt > 2:1260067/1‑150 (MQ=255) gAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCCCTAtgtg > 2:1798773/1‑150 (MQ=37) | AATTTAAATCCTCTGACCACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAATCACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTCATTGAATCTTGGGCGAAACGCACGTGGATTGTTCCTCCACAAATGCAGCTCTATGTG > CP043523/1884430‑1884723 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |