| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP043523 | 1,885,158 | G→T | L280L (CTG→CTT) | FTN78_chr1930 → | Putative UV‑damage repair protein UvrX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP043523 | 1,885,158 | 0 | G | T | 98.2% | 1194.9 / NA | 490 | L280L (CTG→CTT) | FTN78_chr1930 | Putative UV‑damage repair protein UvrX |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base T (226/255); minor base A (0/9); total (226/264) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.45e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 490 total aligned reads displayed.
TATGAAGATGTCCCTAGTAAACTATGGACGATCCCTAAGATGACGGACTTCTGGGGAATCGGAAAACGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCTTTTTTGCTGAAGCAAAAATTAGGAATAATTGGACTTCAACATTTTTTCCATGCTAACGGAATCGATGAAAGCAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTA > CP043523/1885018‑1885289 | gATGTCCCTAATAAACTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGa > 2:2951003/1‑150 (MQ=255) cccTAATAAACTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGaacaat > 2:2349342/1‑150 (MQ=255) cTAATAAACTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTg < 1:336024/150‑1 (MQ=9) taatAAACTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTgg < 1:3517570/147‑1 (MQ=9) aatAACCTATGGACAATTCCTAAGATGACAGATTTCGGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAACAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGa < 2:2262209/148‑1 (MQ=255) atAAACTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGAc < 2:2409736/149‑1 (MQ=255) tAAACTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACt < 1:25185/150‑1 (MQ=14) aaaCTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACtt > 2:305645/1‑150 (MQ=255) aaCTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTc > 2:91636/1‑150 (MQ=255) aaCTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTc > 2:2779019/1‑150 (MQ=255) aaCTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTc > 1:2558690/1‑150 (MQ=255) aCTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCa > 2:1375090/1‑150 (MQ=14) cTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCag < 1:3751334/150‑2 (MQ=14) tATCGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCTAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCagc < 1:1786787/150‑3 (MQ=14) aTGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCa < 2:806762/150‑1 (MQ=255) aTGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCa > 1:2033177/1‑150 (MQ=255) ggACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCAtt < 2:4026948/150‑1 (MQ=14) gacaattccTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCAttt > 1:1091980/8‑150 (MQ=255) caattccTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCATTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCAttttt < 2:2811626/145‑1 (MQ=255) caattccTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCAttttt < 1:1964006/145‑1 (MQ=255) attccTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTc > 2:3152356/4‑150 (MQ=255) attccTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTc > 1:1584645/4‑150 (MQ=255) ttccTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTcc > 1:2793109/3‑150 (MQ=255) tccTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCa > 1:4098359/2‑150 (MQ=14) tccTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCa > 1:612227/2‑150 (MQ=14) tccTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCa < 1:2892907/149‑1 (MQ=255) ccTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCac < 1:1432029/150‑2 (MQ=14) cTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCacg > 2:711340/1‑148 (MQ=255) tAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGc > 2:1681526/1‑150 (MQ=255) aaGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGca < 1:2963186/150‑2 (MQ=255) gATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCacgcaaa > 1:1013595/1‑144 (MQ=255) tGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACg > 2:4295524/1‑150 (MQ=9) cagatttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGaa > 1:1883441/6‑150 (MQ=255) agatttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAAt < 1:2745586/146‑1 (MQ=255) gatttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAAtt < 1:1672023/147‑2 (MQ=14) gatttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAAtt > 1:44725/4‑149 (MQ=14) atttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAAttg < 2:2003424/148‑3 (MQ=14) tttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAAttga > 1:3067944/2‑147 (MQ=255) tCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGacg < 1:2104184/150‑3 (MQ=14) tGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAAttgacgaa > 1:697537/1‑143 (MQ=255) ggggAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGaaa < 1:386709/150‑1 (MQ=255) ggggAATTGGAAAGCGAACTGAGAAACGAGTAAAGAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTACTCCTAAAACAAAAATTGGGAACAATTGTACTTCAGCATTTTTTCCACGCAAACGGAATTGACGaaa < 2:4502637/150‑1 (MQ=255) ggAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAgt < 1:2681302/150‑2 (MQ=2) ggAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAgt < 2:3317159/150‑2 (MQ=2) gAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAgta > 2:878828/1‑148 (MQ=255) attggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAAc < 2:3241430/147‑1 (MQ=2) attggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCATAAAAAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAAc < 2:4091652/147‑1 (MQ=255) attggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTCCTCCTTAAACAAAAACTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAAc > 1:416376/4‑150 (MQ=255) ttggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACg < 2:110616/148‑1 (MQ=14) tggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGt > 1:2267737/2‑150 (MQ=255) tggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGt > 1:397428/2‑150 (MQ=255) ggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTa > 2:1942088/1‑150 (MQ=9) ggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTa < 1:264725/150‑1 (MQ=255) gAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTaa < 2:3787744/150‑1 (MQ=11) gAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTaa < 2:841055/150‑1 (MQ=9) aaagCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAag > 2:3440977/1‑150 (MQ=255) aagcGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAaga > 1:1140980/4‑150 (MQ=255) aagcGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAaga < 1:3630664/147‑1 (MQ=255) agcGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAagag < 1:3226295/148‑1 (MQ=255) aCTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaaaaa > 2:2689904/1‑150 (MQ=14) aCTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaaaaa > 2:581348/1‑150 (MQ=14) cTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAat < 1:4199465/150‑1 (MQ=14) tGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAata > 2:420112/1‑150 (MQ=255) gaAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATAc > 2:947758/1‑150 (MQ=255) gaAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATAc < 1:1519964/150‑1 (MQ=14) aaaCGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACt > 2:3827023/1‑150 (MQ=255) aCGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTcc > 2:2493924/1‑150 (MQ=14) aCGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTcc > 2:1559481/1‑150 (MQ=14) aCGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCATTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTcc < 2:1071497/150‑1 (MQ=255) cGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCa > 1:4517746/1‑150 (MQ=255) gATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCaa < 1:50212/150‑1 (MQ=255) gATTAAACAAACTTGGAATCACTTCTATCAAAGAGATTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCaa > 2:1456229/1‑150 (MQ=255) aaacaaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATc < 1:300329/150‑1 (MQ=255) acTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAg < 2:3904375/150‑1 (MQ=14) cTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGc < 2:1748264/150‑1 (MQ=14) ttGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCt > 2:4183257/1‑150 (MQ=255) ggAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTc < 2:3518427/150‑1 (MQ=11) naTCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAg > 2:2135830/2‑150 (MQ=255) aaTCACTTCTATCAAAGAGCTGGCGAATGCTGCCCCACTTCTCCTTAAACAAAGATTGGGAACAATTGGACCTCAGCATTTTTTCCACGCAATCGGAATTTACGAAAGTAACGTAAGACACAAATATACCCCAAAATCAATTAGCTTCAg > 2:3950751/1‑150 (MQ=255) aTCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGc > 1:1282528/1‑150 (MQ=11) aTCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGc > 2:2893467/1‑150 (MQ=11) tCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCa < 2:2564218/150‑1 (MQ=11) cACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCaa < 1:813180/150‑1 (MQ=11) tCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATtct > 1:924825/1‑150 (MQ=255) tCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATtct > 2:3733751/1‑150 (MQ=255) cTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATtctc > 1:4303489/1‑150 (MQ=255) tATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCa > 1:3296715/1‑150 (MQ=11) tCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCaaa < 1:341686/150‑1 (MQ=11) tCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCaaa < 1:1818304/150‑1 (MQ=11) aaaGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAAtt < 2:4560172/150‑1 (MQ=11) aaaGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAAtt > 1:968387/1‑150 (MQ=11) aaGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTc > 1:1730784/1‑150 (MQ=11) agagCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCt < 1:3042713/150‑1 (MQ=11) agCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGc < 1:1474846/150‑1 (MQ=11) gCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAATAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGcc < 2:4425565/150‑1 (MQ=14) gCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGcc < 1:985340/150‑1 (MQ=11) gCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGcc < 2:775612/150‑1 (MQ=11) gAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTTTTTTTTTTTGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGtca > 2:1252876/1‑148 (MQ=0) aaTGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGAc > 1:325513/1‑150 (MQ=11) aTGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACt < 1:2360825/150‑1 (MQ=11) | TATGAAGATGTCCCTAGTAAACTATGGACGATCCCTAAGATGACGGACTTCTGGGGAATCGGAAAACGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCTTTTTTGCTGAAGCAAAAATTAGGAATAATTGGACTTCAACATTTTTTCCATGCTAACGGAATCGATGAAAGCAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTA > CP043523/1885018‑1885289 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |