| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP043523 | 1,885,215 | T→C | D299D (GAT→GAC) | FTN78_chr1930 → | Putative UV‑damage repair protein UvrX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP043523 | 1,885,215 | 0 | T | C | 99.8% | 1217.5 / NA | 501 | D299D (GAT→GAC) | FTN78_chr1930 | Putative UV‑damage repair protein UvrX |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (217/282); total (218/283) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 501 total aligned reads displayed.
TGGGGAATCGGAAAACGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCTTTTTTGCTGAAGCAAAAATTAGGAATAATTGGACTTCAACATTTTTTCCATGCTAACG‑GAATCGATGAAAGCAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATCGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAA > CP043523/1885069‑1885358 | ggggAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGaaa > 1:1507972/1‑150 (MQ=9) ggAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAgt < 2:2078527/150‑2 (MQ=2) ggAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAgt < 1:2681302/150‑2 (MQ=2) aattggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTaa < 2:296691/146‑1 (MQ=255) attggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTCCTCCTTAAACAAAAACTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAAc > 1:416376/4‑150 (MQ=255) ttggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAACTGGGAACAATTGGTCTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACg < 2:3882863/148‑1 (MQ=255) tggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGt > 2:2189674/2‑150 (MQ=255) gAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTaa < 2:840998/150‑1 (MQ=14) aaagCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAag > 2:3440977/1‑150 (MQ=255) aaagCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAag > 1:2781892/1‑150 (MQ=255) aagcGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAaga < 2:2848042/147‑1 (MQ=255) agcGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAGCAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAagag < 1:3224709/148‑1 (MQ=255) gcGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGAGCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAgaga < 1:3980435/149‑1 (MQ=9) tattgcgagaAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGaa > 2:4545302/7‑150 (MQ=255) gAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGaaa > 2:2292044/1‑150 (MQ=255) aaCTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGaaaa > 2:2451671/1‑150 (MQ=14) aCTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCTACTC‑AACGTGAATTGAGGAAAGTAACGTAAGAGaaaaa > 2:74541/1‑150 (MQ=9) aCTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGaaaaa > 2:581348/1‑150 (MQ=14) aCTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGaaaaa > 1:864691/1‑150 (MQ=14) gagaAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAatat < 1:3932048/150‑1 (MQ=255) agaAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAAtata > 1:326588/1‑150 (MQ=14) gaAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATAc < 2:3258968/150‑1 (MQ=14) gaAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATAc > 2:947758/1‑150 (MQ=255) aaaCGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAATAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACt < 2:4030925/150‑1 (MQ=255) aaaCGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACt > 2:3827023/1‑150 (MQ=255) aCGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTcc > 2:1559481/1‑150 (MQ=14) aCGAATAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTcc < 1:1748463/150‑1 (MQ=14) cGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCa > 1:4517746/1‑150 (MQ=255) gATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCaa < 2:1091980/150‑1 (MQ=255) aTTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCaaa < 2:1126632/150‑1 (MQ=255) ttAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCaaaa < 2:1200937/150‑1 (MQ=14) ttAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCaaaa < 1:692694/150‑1 (MQ=14) aaacaaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATc < 1:480285/150‑1 (MQ=255) aacaaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATct > 1:3465885/1‑150 (MQ=14) caaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATctac < 2:3076482/150‑1 (MQ=14) aaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATctact < 2:2379770/150‑1 (MQ=255) aacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATctacta < 2:678807/150‑1 (MQ=255) acTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAg < 1:1624679/150‑1 (MQ=14) cTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGc < 2:1606473/150‑1 (MQ=14) cTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGc < 2:1748264/150‑1 (MQ=14) cTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGc < 2:3753947/150‑1 (MQ=14) ttGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCt > 2:4184626/1‑150 (MQ=255) gAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCa > 1:3627629/1‑150 (MQ=255) aaTCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAg > 1:2992849/1‑150 (MQ=255) aaTCACTTCTATCAAAGAGCTGGCGAATGCTGCCCCACTTCTCCTTAAACAAAGATTGGGAACAATTGGACCTCAGCATTTTTTCCACGCAATCG‑GAATTTACGAAAGTAACGTAAGACACAAATATACCCCAAAATCAATTAGCTTCAg > 2:3950751/1‑150 (MQ=255) aTCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAAAAAAAATTGGGAACAAGTGGACTTAAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAAATTAAGAGAAAAATATACTCCAAAATATAATAGGTTCAGc > 1:1279688/1‑150 (MQ=255) tCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCa < 2:2564218/150‑1 (MQ=11) cTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAAtt < 1:3031729/150‑1 (MQ=255) cTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATtctc < 2:2927583/150‑1 (MQ=255) cTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATtctc < 2:4237284/150‑1 (MQ=255) tATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCa > 1:1549998/1‑150 (MQ=11) tATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCa < 2:1321119/150‑1 (MQ=11) aTCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCaa < 2:2797165/150‑1 (MQ=11) tCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCaaa < 1:1821099/150‑1 (MQ=11) cAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAAt < 1:2886547/150‑1 (MQ=11) agagCTTGCGAATGCTGACCCACTACTACTTAAACAAAAATAGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGCAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCt < 2:2776811/150‑1 (MQ=11) gagCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGAATTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGAAACATAAGAAAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTg < 2:2608442/150‑1 (MQ=11) agCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGc > 2:1381179/1‑150 (MQ=11) gCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGcc < 1:985340/150‑1 (MQ=11) gCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAAAGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGcc < 2:4425640/150‑1 (MQ=11) cTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCa < 1:2209524/150‑1 (MQ=11) ttGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCAc > 1:1710086/1‑150 (MQ=11) tGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTGCTAGCTTCAGCAATTCTCAAATTCTGCCACg > 1:4132851/1‑150 (MQ=2) cGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTg < 1:547956/150‑1 (MQ=11) aTGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTTACt > 2:853270/1‑150 (MQ=11) aTGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACt > 1:2012185/1‑150 (MQ=11) aTGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACt < 1:2360825/150‑1 (MQ=11) ccttaaacAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTTGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAgaga < 2:4098359/143‑1 (MQ=17) cttaaacAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGaa < 1:4581210/144‑1 (MQ=17) cttaaacAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGaa > 2:3663221/7‑150 (MQ=17) aaaTTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACtt > 1:3085988/1‑150 (MQ=18) aaaTTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACtt > 1:1591276/1‑150 (MQ=18) aaTTGGAAAAAATTGGAATTCAGCATTTTTTCCACGCAAACG‑GAACTGACGAAAGTAAAGTAAGAGAAAAATATACTCCAAAATCTACTCGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGaaattgaaattg < 2:31785/150‑1 (MQ=17) aTTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTtgt > 1:2405498/1‑150 (MQ=17) ggAACAATTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGAtt < 1:2287496/150‑1 (MQ=18) aacaatTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTaa < 1:90302/147‑1 (MQ=17) acaatTGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTaaa > 1:3382943/3‑150 (MQ=17) ttGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGaaa < 2:1883441/150‑1 (MQ=17) ttGGACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGaaa < 2:1508951/150‑1 (MQ=17) gACTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATgg > 1:4370463/1‑150 (MQ=17) cTTCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCt > 1:3867932/1‑150 (MQ=17) tcagcATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTga < 1:3061575/146‑1 (MQ=17) tCAGCATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTga > 2:335232/1‑150 (MQ=17) cagcATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTgag > 1:4261176/4‑150 (MQ=17) cATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAAc > 1:4049768/1‑150 (MQ=18) cATTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAAACTACTAGCGTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTATGATTAAAGAAATGGCTGAGAAc > 2:4490000/1‑150 (MQ=255) aTTTTTTCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACt < 1:1375090/150‑1 (MQ=17) ttttttCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACtt > 1:2078845/1‑150 (MQ=18) tttttCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTa < 1:1316517/150‑1 (MQ=18) ttttCCACGCAAACG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAg < 1:2545663/150‑1 (MQ=18) ccacgcaaaCG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGAt > 2:3600926/8‑150 (MQ=18) cgcaaaCG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAg > 1:9586/5‑150 (MQ=18) cgcaaaCG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAg < 1:1017560/146‑1 (MQ=18) aaaCG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGAtt > 1:763723/2‑150 (MQ=18) aaaCG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGAtt > 1:1442982/2‑150 (MQ=18) aaCG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTg < 2:434705/150‑1 (MQ=18) aaCG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTg > 1:3722186/1‑150 (MQ=18) aCG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTga > 2:1982382/1‑150 (MQ=18) aCG‑GAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTga > 1:1943819/1‑150 (MQ=18) g‑gAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTgaga > 1:1120196/1‑150 (MQ=18) | TGGGGAATCGGAAAACGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCTTTTTTGCTGAAGCAAAAATTAGGAATAATTGGACTTCAACATTTTTTCCATGCTAACG‑GAATCGATGAAAGCAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATCGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAA > CP043523/1885069‑1885358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |