| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP043523 | 1,885,398 | A→T | G360G (GGA→GGT) | FTN78_chr1930 → | Putative UV‑damage repair protein UvrX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP043523 | 1,885,398 | 0 | A | T | 99.7% | 1901.4 / NA | 607 | G360G (GGA→GGT) | FTN78_chr1930 | Putative UV‑damage repair protein UvrX |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (306/299); minor base C (0/2); total (306/301) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.45e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 608 total aligned reads displayed.
TACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATCGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGAGCTGCTTCTACTTCTGAATACTCATCTATTAAGGTTTCTCGCAATATCGAAGCAACGCAAAACACAAAGGAATTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATTAGACAAATAGGGATAAGCGG > CP043523/1885251‑1885544 | tactaGCTTCAGCAATTCTCAAATTCTGCTACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTgc < 2:4517746/150‑1 (MQ=255) actaGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTgct < 2:1013595/150‑1 (MQ=255) gCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCtt < 2:165404/150‑1 (MQ=255) cTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTc > 1:1785781/1‑150 (MQ=255) cTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTc < 2:325513/150‑1 (MQ=255) tcatcaATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTCTCACTTTATGCAGGTGCTGCTTCTa < 2:1279810/150‑1 (MQ=255) aGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACt < 2:2665640/150‑1 (MQ=255) gCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACtt > 1:4595264/1‑150 (MQ=255) gCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATAGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACtt < 2:4303489/150‑1 (MQ=255) cAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTc > 2:4105468/1‑150 (MQ=255) cAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTc > 1:3622921/1‑150 (MQ=255) aaTTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCt > 2:300543/1‑150 (MQ=255) aTTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTg > 1:3328652/1‑150 (MQ=255) tctcAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGaa > 2:3916103/1‑150 (MQ=255) aaaTTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACt > 1:4382271/1‑150 (MQ=255) aaaTTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACt < 1:2937614/150‑1 (MQ=255) aaaTTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACt < 2:415552/150‑1 (MQ=255) aTTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTct < 1:770402/150‑2 (MQ=255) tGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACtcttctg < 1:2433064/150‑2 (MQ=255) gCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACtcttctgt < 2:4049768/150‑3 (MQ=255) ccACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGtt < 2:1389639/150‑1 (MQ=37) tGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGt < 1:2623900/150‑1 (MQ=37) tGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGt < 1:1145475/150‑1 (MQ=37) gACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGtt < 1:1252876/150‑1 (MQ=37) aCTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGttt > 2:1314257/1‑150 (MQ=37) tATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTtct < 1:2519029/150‑1 (MQ=37) tATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTtct < 2:3649138/150‑1 (MQ=255) aTCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTtctc > 1:2162732/1‑150 (MQ=37) tAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCaa < 2:342845/150‑1 (MQ=37) aaGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAat > 2:918850/1‑150 (MQ=255) aaGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAat < 2:245837/150‑1 (MQ=37) gCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTGCTACTTCTGTATACTCTTCTGTTAAGGTTTCTCGCAatat < 2:3082998/150‑1 (MQ=21) cAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAatatt < 1:4161762/150‑2 (MQ=255) naaGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAatattg > 2:823385/2‑148 (MQ=25) aaaGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAatattg > 1:2976542/1‑148 (MQ=25) aaaGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAatattg < 1:1355156/150‑3 (MQ=25) aaGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGa > 2:1814761/1‑150 (MQ=25) agagAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGaa < 1:3505153/150‑1 (MQ=25) agagAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGaa > 1:4416161/1‑150 (MQ=25) gagaAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAg < 2:1887638/150‑1 (MQ=25) gaAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGcc < 1:3204864/150‑2 (MQ=25) aaTTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCAc > 2:2368824/1‑150 (MQ=25) gAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGGTTGTGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTGCTGAATACTCTGCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCaa > 2:2301357/1‑150 (MQ=21) cTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAac < 2:3867932/150‑1 (MQ=25) ttGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAaca < 1:313199/150‑1 (MQ=37) tgATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACaa > 1:1006133/1‑150 (MQ=37) ttAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAgg > 1:2691392/1‑150 (MQ=37) tAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGa > 1:315787/1‑150 (MQ=25) aaGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGagt > 1:2779278/1‑148 (MQ=37) gAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTg > 2:3335148/1‑150 (MQ=25) gAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTg < 1:3707493/150‑1 (MQ=37) aTGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCaa > 2:4028836/1‑150 (MQ=37) ggCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGa > 1:3369420/1‑150 (MQ=37) gCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGTATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGAc < 2:3737775/150‑1 (MQ=25) tGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTGCTACTTCTGAATACTCTTCTGTTAAGGTTTCACGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCt < 1:541778/150‑1 (MQ=21) gagaACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTc < 2:763723/150‑1 (MQ=25) gagaACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTc < 1:2285588/150‑1 (MQ=25) agaACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCg < 2:890343/150‑1 (MQ=37) naCTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCa > 2:2891667/2‑150 (MQ=37) aaCTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCa > 2:4571021/1‑150 (MQ=25) aaCTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCa > 1:3045861/1‑150 (MQ=37) ttAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAAtc < 2:2145990/150‑1 (MQ=37) tAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAAtct < 1:1554670/150‑1 (MQ=37) gATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCttt < 2:2779278/150‑1 (MQ=37) gagaAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGa < 2:1120196/150‑1 (MQ=25) gaAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGaaa > 2:2950191/1‑150 (MQ=25) aaaGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGaaaa > 1:288877/1‑150 (MQ=25) aaGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAg > 1:1120686/1‑150 (MQ=25) aGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGt > 1:4529149/1‑150 (MQ=25) aGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGt < 1:656472/150‑1 (MQ=25) gggCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTa < 2:510368/150‑1 (MQ=25) gCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTAcc > 2:3547616/1‑150 (MQ=25) cGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCa > 2:2063188/1‑150 (MQ=25) cGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCa > 1:1866640/1‑150 (MQ=25) cGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCa < 1:3470464/150‑1 (MQ=25) cGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCa < 1:4299325/150‑1 (MQ=25) aaaaCTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAgg > 1:1465535/1‑150 (MQ=25) aaaaCTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAgg > 2:4434330/1‑150 (MQ=25) aaCTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAgggg > 2:680923/1‑150 (MQ=25) aaCTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAgggg > 2:1348693/1‑150 (MQ=25) cTAGCAAGCAATCTTTCAGTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGa < 1:3811287/150‑1 (MQ=255) cTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGa > 1:849526/1‑150 (MQ=25) agcaagcaATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGc < 2:42475/150‑1 (MQ=25) agcaagcaATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGc < 2:1510011/150‑1 (MQ=25) agcaagcaATCTTTCACTTTATGCAGGCGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGc < 1:4056931/150‑1 (MQ=25) aagcaaTCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGAt > 2:2814081/1‑150 (MQ=25) agcaaTCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGAta < 1:792806/150‑2 (MQ=255) agcaaTCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGAta > 2:1181002/1‑149 (MQ=25) caaTCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAg > 2:2211718/1‑150 (MQ=255) aaTCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGa < 1:900504/150‑1 (MQ=255) aTCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGAc > 1:3227205/1‑150 (MQ=255) aTCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGAc > 2:562402/1‑150 (MQ=255) tCTTACACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAGAGTACCAAGGGGGAGCGAtaacaca < 2:3816701/150‑7 (MQ=255) ttCACTTTATGCAGGTGCTGCTTCTAGTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAAt < 1:3906597/150‑1 (MQ=255) aCTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAgg < 1:1721770/150‑1 (MQ=255) tttATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGa > 1:196956/1‑150 (MQ=255) tGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAg < 1:2072880/150‑1 (MQ=255) tGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAg > 2:1725808/1‑150 (MQ=255) cAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAGAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCg > 1:3948391/1‑150 (MQ=255) cAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCg > 2:1592972/1‑150 (MQ=255) | TACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATCGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGAGCTGCTTCTACTTCTGAATACTCATCTATTAAGGTTTCTCGCAATATCGAAGCAACGCAAAACACAAAGGAATTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATTAGACAAATAGGGATAAGCGG > CP043523/1885251‑1885544 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |