| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP043523 | 1,885,662 | A→T | T448T (ACA→ACT) | FTN78_chr1930 → | Putative UV‑damage repair protein UvrX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP043523 | 1,885,662 | 0 | A | T | 99.8% | 1652.0 / NA | 548 | T448T (ACA→ACT) | FTN78_chr1930 | Putative UV‑damage repair protein UvrX |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (298/248); minor base C (0/1); total (298/250) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 551 total aligned reads displayed.
GGGAGCGATTAGACAAATAGGGATAAGCGGGAATCAACTTTCTGATAGTTCTGTTAAACAACTGTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACATTCGATTTTCTATCTATACAAAAAGCAAGTAGTTTATCCGAGGGATCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGAAAAAGATGTCAGTTGACCGTTCATATAGTCCCTACGAG > CP043523/1885515‑1885807 | ggAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTc > 1:1348846/1‑150 (MQ=255) aGCGATAAGACAAATAGGGATAAGCGCAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGa < 2:4174595/150‑1 (MQ=255) gCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGAt < 1:190284/150‑1 (MQ=255) gATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGAttt > 1:4216683/1‑150 (MQ=255) gATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGAttc > 1:1087628/1‑149 (MQ=255) aGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTtctt < 2:2512476/150‑2 (MQ=255) gACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTtcttt < 2:2664641/150‑3 (MQ=255) aCAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTtctttc > 1:46038/1‑147 (MQ=255) aGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAGAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACa > 2:3218420/1‑150 (MQ=255) aGGGATAAGCGGAAATCAACTTTCCGATACTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACa < 2:4537447/150‑1 (MQ=255) aTAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACaaaag > 1:3138913/1‑149 (MQ=255) aTAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACaaaag > 2:511440/1‑149 (MQ=255) tAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACaaaagg > 1:1874251/1‑148 (MQ=255) cggaaaTCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAag < 1:3251548/146‑1 (MQ=255) cGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAag > 1:1994234/1‑150 (MQ=255) cGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAag > 2:2564700/1‑150 (MQ=255) gaaaTCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAagta > 2:1328698/3‑150 (MQ=255) gaaaTCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAagta < 1:100714/148‑1 (MQ=255) gaaaTCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAagta > 2:4281029/3‑150 (MQ=255) gaaaTCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAagta < 2:1030650/148‑1 (MQ=255) aTCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGtt > 1:2604310/1‑150 (MQ=255) cAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTa < 1:4352827/150‑1 (MQ=255) cTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATcc < 2:2247285/150‑1 (MQ=255) cTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATcc < 1:3509988/150‑1 (MQ=255) cTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAgg < 1:673469/150‑1 (MQ=255) tGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAgga > 2:43972/1‑149 (MQ=255) aTAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAggatt < 2:215144/150‑4 (MQ=255) tAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAggattc > 1:1646602/1‑146 (MQ=255) tAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAggattc > 2:3072748/1‑146 (MQ=255) aGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAggattca > 2:2206478/1‑145 (MQ=255) aGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAggattca < 1:2147996/150‑6 (MQ=255) gTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAggattcac > 1:2687180/1‑144 (MQ=255) ttCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAggattcacg > 1:1469586/1‑143 (MQ=255) tCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACgt < 1:2821359/150‑1 (MQ=255) cTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACgtg > 2:3477598/1‑150 (MQ=255) tGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACgtgt < 1:767593/150‑1 (MQ=255) tGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACgtgt > 2:1624609/1‑150 (MQ=255) tGTTAAACAACTCTCTTTATTTGAAAGCGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACgtgt < 1:4060138/150‑1 (MQ=255) caacTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTAt < 2:3608787/150‑1 (MQ=255) acTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGAGTAGAGAGACTGTCGATTTTCTTTCAATACAAAAGGCAAGAAGTTTATCCGAGGATTCACGTGTCATTTATCg > 2:4126073/1‑150 (MQ=255) ctctCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCgg < 2:3814427/147‑1 (MQ=255) ctctCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCgg > 1:3600395/4‑150 (MQ=255) tctCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCgg > 2:2717312/3‑150 (MQ=255) tATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAAc < 2:4061535/150‑1 (MQ=255) aTTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACt > 2:912623/1‑150 (MQ=255) aTTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACt < 1:606990/150‑1 (MQ=255) tGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCAt < 2:2029250/150‑1 (MQ=255) gAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCAtt < 2:1926381/150‑1 (MQ=255) gtTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGt < 2:692537/150‑1 (MQ=255) cAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCAt < 1:156640/150‑1 (MQ=255) aaaaTCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATgcag < 1:2578577/150‑1 (MQ=255) aaaTCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGAAGAGATAAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGAGTCATATATCGGAACAAACTCATTGGAGGTCATgcagc > 2:2982638/1‑150 (MQ=255) aaTCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATgcagca > 2:1849910/1‑150 (MQ=255) aTCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCaa > 2:1088467/1‑150 (MQ=255) tCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAg < 1:1761591/150‑1 (MQ=25) aaaCTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTc < 2:3117590/150‑1 (MQ=25) aaCTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCa > 2:3433139/1‑150 (MQ=25) cTAAGAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAg < 2:2907878/150‑1 (MQ=18) taataaAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGACATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGa > 1:2757618/1‑150 (MQ=18) ataaAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGCTTCACGTGTCATTTATCGGAACAAACTCATTGGAGGACATGCAGCAAGTCAAGACa > 1:180161/1‑150 (MQ=255) aaaaaGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAag > 1:205683/1‑150 (MQ=25) aaaaaGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAag < 1:24660/150‑1 (MQ=25) aaaaGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAagg < 1:3938686/150‑1 (MQ=25) aaaGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAagga > 2:2796863/1‑150 (MQ=21) aGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAaggagg > 1:542417/1‑150 (MQ=25) gCAAGAATCGCTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAaggaggt < 2:592299/150‑2 (MQ=18) aaGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGTCAAGGAGGtaa > 1:9469/1‑150 (MQ=21) aGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGtaaa > 1:334737/1‑150 (MQ=25) aCTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCGAGACAAGGAGGTAAAAGATGt > 1:1694865/1‑150 (MQ=21) aCTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGt > 1:877348/1‑150 (MQ=21) aCTCC‑AAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGt > 1:3487750/1‑150 (MQ=21) tCC‑AAAAAGCTATTCATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCa < 1:3858039/150‑1 (MQ=21) aaaaaGCTATTGCTGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAACCTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGCAAAAGATGTCAGtt > 2:4448295/1‑150 (MQ=18) aaaaaGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGtt > 1:3640018/1‑150 (MQ=21) aaaaGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTg > 1:3029994/1‑150 (MQ=21) aaaaGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTg > 1:288411/1‑150 (MQ=21) agcaaaagatgaGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGAcc > 2:1552188/8‑150 (MQ=18) aGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGAcc > 1:2305787/1‑150 (MQ=21) aGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGAcc < 2:3158412/150‑1 (MQ=21) gCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCg < 2:1702663/150‑1 (MQ=21) gCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCg > 1:4011638/1‑150 (MQ=21) cTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGt > 1:3786129/1‑150 (MQ=21) cTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGt > 2:2464245/1‑150 (MQ=18) aTTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTc < 1:1273747/150‑1 (MQ=21) ttGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCa < 2:3272509/150‑1 (MQ=21) gatgaGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCata > 1:2360544/1‑150 (MQ=21) ctgaGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGGGGAATCACGTGTCATTTATCGGAACAGACTCATTGGAGGTCATGCAGCAAGTGAAGACAGGGAGCTAGAGGATGTCAGTTCACCATTCatac > 2:3356541/2‑149 (MQ=255) tgaGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCataca < 2:1406187/150‑3 (MQ=21) agaTTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCatacagc > 1:2220351/1‑146 (MQ=18) agaTTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAgc < 2:2400796/150‑2 (MQ=18) gaTTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCatacagcc > 2:1196615/1‑145 (MQ=18) gaTTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCatacagcc > 2:808186/1‑145 (MQ=18) aTTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCatacagccc > 1:749938/1‑144 (MQ=18) tAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCt < 1:2485562/150‑1 (MQ=17) tAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCt < 2:632748/150‑1 (MQ=18) agagAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTa < 2:293772/150‑1 (MQ=18) agaAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTatg < 2:387151/150‑3 (MQ=18) agaAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTatg > 1:4457872/1‑148 (MQ=18) aaaCTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTCAAAGATGTCAGTTGACCGTTCATACAGCCCCTatgaa > 2:3978347/1‑146 (MQ=17) aaaCTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGaa < 2:1525688/150‑2 (MQ=18) | GGGAGCGATTAGACAAATAGGGATAAGCGGGAATCAACTTTCTGATAGTTCTGTTAAACAACTGTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCC‑AAAAAGCTATTGATGAGATTAGAGAAACATTCGATTTTCTATCTATACAAAAAGCAAGTAGTTTATCCGAGGGATCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGAAAAAGATGTCAGTTGACCGTTCATATAGTCCCTACGAG > CP043523/1885515‑1885807 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |