| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP043523 | 88,575 | T→A | V957E (GTA→GAA) | FTN78_chr0110 → | Phage capsid and scaffold |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP043523 | 88,575 | 0 | T | A | 99.6% | 1563.0 / NA | 470 | V957E (GTA→GAA) | FTN78_chr0110 | Phage capsid and scaffold |
| Reads supporting (aligned to +/- strand): ref base T (1/0); major base A (248/219); minor base C (2/0); total (251/219) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 478 total aligned reads displayed.
CGCAATATACACATATCGCTTACGCAAATAGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGTAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGTTTATCCTAATTTGAATTTGTTGGATGGTA > CP043523/88428‑88721 | gCAATATACACATATCGCTTACGCAAATAGTGCCGATGGTGAAACTAATTTTTCAACTTCTGATTCTAATCGGACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGaaaa > 2:4020739/1‑150 (MQ=255) gCAATATACACATATCGCTTACGCAAATAGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGaaan < 2:1209834/150‑2 (MQ=255) gCAATATACACATATCGCTTACGCAAATAGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGaaaa < 2:3867938/150‑1 (MQ=255) cAATATACACATATCGCTTACGCAAATAGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAaaaa < 1:4197007/150‑1 (MQ=255) tataCACATATCGCTTACGCAAATAGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGa < 1:1448808/150‑1 (MQ=255) ataCACATATCGCTTACTCAAATAGTGCCGATAGTAAAACTAATTTTTCAACTTCTTATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATTATTCAACTACTCCAAGTGATTACTCATGTACACTCGAAAAAGGAg < 1:259132/150‑1 (MQ=255) ataCACATATCGCTTACGCAAATAGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAg < 1:395330/150‑1 (MQ=255) ataCACATATCGCTTACGCAAATAGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATAAACAAACGAAAAAGGAg < 2:151754/150‑1 (MQ=255) taCACATATCGCTTACGCAAATAGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGc > 1:2520753/1‑150 (MQ=255) taCACATATCGCTTACGCAAATAGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGc > 1:2077214/1‑150 (MQ=255) acacATATCGCTTACGCAAATAGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCg < 2:3489427/150‑1 (MQ=255) acacATATCGCTTACGCAAATAGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCg > 1:4415218/1‑150 (MQ=255) acaTATCGCTTACGCAAATAGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGa < 1:2448490/150‑1 (MQ=255) atCGCTTACGCAAATAGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGa > 1:1668854/1‑150 (MQ=255) cTTACGCAAATAGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGc > 1:2826904/1‑150 (MQ=255) tACGCAAATAGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCaa > 2:2712187/1‑150 (MQ=255) aCGCAAATAGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAg > 1:792541/1‑150 (MQ=255) cGCAAATAGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAgg > 1:2891724/1‑150 (MQ=255) ctAGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTTATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGAAGGAACGCAAGGGacac > 2:3752570/2‑150 (MQ=255) aGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCg < 2:297417/150‑1 (MQ=255) tGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCggg < 2:3522106/150‑1 (MQ=255) tGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCggg > 1:541103/1‑150 (MQ=255) tGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCggg > 1:4340779/1‑150 (MQ=255) cGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCaa > 2:144105/1‑150 (MQ=255) ggTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCg < 2:2106562/150‑1 (MQ=255) gTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCgg > 1:1096528/1‑150 (MQ=255) gTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCgg < 1:130321/150‑1 (MQ=255) tAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCggg > 2:1998130/1‑150 (MQ=255) aaaaCTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCgggg < 2:508498/150‑1 (MQ=255) aaaCTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGa > 1:1648802/1‑150 (MQ=255) aaCTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGAc > 2:864765/1‑150 (MQ=255) cTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAg > 2:2789987/1‑150 (MQ=255) tAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGa > 2:4212973/1‑150 (MQ=255) aaTTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGAc > 2:3095761/1‑150 (MQ=255) aaTTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGAc < 1:1195782/150‑1 (MQ=255) aTTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACg < 2:68564/150‑1 (MQ=255) ttttCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGt < 1:1263643/150‑1 (MQ=255) ttttCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGt < 1:3910643/150‑1 (MQ=255) ttttCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGAGGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGt < 2:1311809/150‑1 (MQ=255) ttCAACTTCTGATTCTAACCGTACCTATATCGGGATGTACGTTCATTTTAACATCAATCATCCAACCACTCCAAGCGATTACTCATGCCCCCCCGCACAAGCCCCGCATGGAACCCACGCGACACCCGGCCAACCGCGCACAGCCGGtca > 2:2871572/1‑148 (MQ=255) tCAACTTCTGATTCTAATCGTGCCTATATCGGGATGTACGTTGATTTTAACATCAATGATTGAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGAGGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAg > 2:4444077/1‑150 (MQ=255) cAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGa > 2:1822727/1‑150 (MQ=255) cTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTc > 2:4580004/1‑150 (MQ=255) ttCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTcc > 1:194509/1‑150 (MQ=255) tCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCa > 1:671565/1‑150 (MQ=255) tGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCata > 2:2598285/1‑150 (MQ=255) gATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCatat > 1:1161996/1‑150 (MQ=255) gATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCatat < 1:2966248/150‑1 (MQ=255) aTTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATAtt < 1:216095/150‑1 (MQ=255) aTTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATAtt < 1:2666696/150‑1 (MQ=255) ttCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATAttt > 1:3721420/1‑150 (MQ=255) cTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTc > 1:1828860/1‑150 (MQ=255) tACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGc < 1:2621637/150‑1 (MQ=255) ccTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCAt < 1:1998130/150‑1 (MQ=255) atatCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGt < 1:4472810/150‑1 (MQ=255) tCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCtt < 1:3131858/150‑1 (MQ=255) cGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTta > 2:2180287/1‑150 (MQ=255) gggATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTtat < 1:716747/150‑1 (MQ=255) ggATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTtata < 1:3458071/150‑1 (MQ=255) aTGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAgc > 1:1713122/1‑150 (MQ=255) tGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAgcg < 2:2299781/150‑1 (MQ=255) gTACGTTGAGTTTAACATCAATGATTCCACTACTCCAAGTGATTACTCATGGACCCTCGAAAAAGGAGCGGAAGGAACGCAAAGGACACCGGGCAAAACGGGGGCAGACGGTAAGACGCCCTATTTTCACACCGCAAGGTCTTATAgcgc > 2:247855/1‑150 (MQ=255) aCGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAg < 1:3671455/150‑1 (MQ=255) gTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGAc > 1:4444714/1‑150 (MQ=255) gTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGAc < 1:3082921/150‑1 (MQ=255) gTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGAc < 2:1402308/150‑1 (MQ=255) tGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACgg > 2:1743836/1‑150 (MQ=255) tAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTacgga > 1:4285358/1‑150 (MQ=255) aaCATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTacggac < 1:2747884/150‑1 (MQ=255) aCATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTacggacg > 2:1108029/1‑150 (MQ=255) cATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTacggacgg > 1:2273644/1‑150 (MQ=255) cATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTacggacgg < 2:320207/150‑1 (MQ=255) aTCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGt < 1:847265/150‑1 (MQ=255) tCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGtt > 2:3274171/1‑150 (MQ=255) aaTGATTCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTc < 1:2345064/150‑1 (MQ=255) tCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACt < 2:3358635/150‑1 (MQ=255) tCAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACt < 1:1063643/150‑1 (MQ=255) cAACTACTCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTg < 1:4133852/150‑1 (MQ=255) aaCTAATCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGt > 2:379720/1‑150 (MQ=255) actcctCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGtt < 1:1012118/150‑1 (MQ=255) actactCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGtt < 2:1922961/150‑1 (MQ=255) ctactCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGttt < 1:3297119/150‑1 (MQ=255) ctactCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGttt > 2:4351878/1‑150 (MQ=255) actCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGTTTAt > 2:3938258/1‑150 (MQ=255) ctCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGTTTATc < 2:1041776/150‑1 (MQ=255) tCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGTTTATcc > 1:134888/1‑150 (MQ=255) tCCAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGTTTATcc < 2:4289288/150‑1 (MQ=255) cAAGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGATACCGGGTAAACCGGGGACAGACGGTAAGATTCTATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGTTTATCCTa < 2:943863/150‑1 (MQ=39) aaGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGTTTATCCTaa > 1:4548051/1‑150 (MQ=255) aaGTGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGTTTATCCTaa > 2:2671025/1‑150 (MQ=255) tGATTACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGTTTATCCTaattt < 2:2337675/150‑1 (MQ=255) ttACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGTTTATCCTaatttgaa > 2:3613993/1‑150 (MQ=255) tACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGTTTATCCTaatttgaat < 1:3791529/150‑1 (MQ=255) tACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGTTTATCCTaatttgaat < 1:335334/150‑1 (MQ=255) tACTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGTTTATCCTaatttgaat < 2:541103/150‑1 (MQ=255) aCTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGTTTATCCTaatttgaatt > 1:888713/1‑150 (MQ=255) cTCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGTTTATCCTaatttgaattt > 1:2382497/1‑150 (MQ=255) tCATGGACACTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGTTTATCCTaatttgaatttn < 2:167495/150‑2 (MQ=255) acTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGTTTATCCTAATTTGAATTTGTTGGATgg > 2:3569846/1‑150 (MQ=255) cTCGAAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGTTTATCCTAATTTGAATTTGTTGGATGGt > 1:990902/1‑150 (MQ=255) | CGCAATATACACATATCGCTTACGCAAATAGTGCCGATGGTAAAACTAATTTTTCAACTTCTGATTCTAATCGTACCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACTACTCCAAGTGATTACTCATGGACACTCGTAAAAGGAGCGGATGGAACGCAAGGGACACCGGGCAAACCGGGGACAGACGGTAAGACTCCATATTTTCACACAGCATGGTCTTATAGCGCAGACGGTACGGACGGTTTCACGACTGTTTATCCTAATTTGAATTTGTTGGATGGTA > CP043523/88428‑88721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |