BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP043523	1,891,084	A→G	Y49Y (TAT→TAC)	FTN78_chr1940 ←	Mobile element protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP043523	1,891,084	0	A	G	99.2%	544.5 / NA	264	Y49Y (TAT→TAC)	FTN78_chr1940	Mobile element protein
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (144/116); minor base C (1/1); total (146/118)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 264 total aligned reads displayed.

ATACTCGGTAAGAGGGCATTACAACGGCGGACAAAGCGAGAATATTCTAGGAAATTAGGAAATAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGATAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTGTCAGTAAATAAACAAAAAC  >  CP043523/1890959‑1891203

      ggTAAGAGGGCATTACAACGGCGGACAAAGCGAGAATATTCTAGGAAATTAGGAAATAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGCTAACAAGCGATAACTAAACAGTCAGATGtt                                                                                           >  1:490638/1‑150 (MQ=255)

      attAAGAAGGCATTACAACGGCTGACAAAGCGAAAATATTCTATAAAATTAAGAAATAAACTTTGATCCAATTGGTACTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGCTAACAAGCGATAACTAAACAGTCAGATGtt                                                                                           <  1:3739053/148‑1 (MQ=11)

                           cgaaCAAAGCGAGTATATTCAAGGAAATAAGGAAATAAACTTTGAGCCAATTGGTGCTTAGATTTAAGCGTTTCACTAAAATGCAGTACTCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCgg                                                                      >  2:656415/4‑150 (MQ=1)

                              acgaaGCGAGAATATTCTAGGAAATTGGGAAATAAACTTTGAGCCAATTGGTGCTTAGCGTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAACAGTCAGATGTTGCAAGATGGACGTTCTTTCGGttt                                                                   <  1:2867357/147‑1 (MQ=11)

                                            ttCTAGGAAATTAGGAAATAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGa                                                     >  1:320607/1‑150 (MQ=1)

                                             tCTAGGAAATTAGGAAATAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGaa                                                    >  2:246410/1‑150 (MQ=11)

                                             tCTAGGAAATTAGGAAATAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGaa                                                    <  1:2671759/150‑1 (MQ=14)

                                              cTAGGAAATTAGGAAATAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGaaa                                                   >  2:2707745/1‑150 (MQ=17)

                                              cTAGGAAATTAGGAAATAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGaaa                                                   >  1:2963590/1‑150 (MQ=17)

                                              cTAGGAAATTAGGAAATAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGGTTTGAACCTCAAGGGaaa                                                   >  1:3809402/1‑150 (MQ=17)

                                               taggaaattaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAac                                                  >  1:3529330/1‑150 (MQ=17)

                                                aggaaattaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAaca                                                 <  2:3015493/150‑1 (MQ=17)

                                                aggaaattaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAaca                                                 >  1:2434530/1‑150 (MQ=17)

                                                aggaaattaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAaca                                                 <  2:419164/150‑1 (MQ=17)

                                                 ggaaattaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAacac                                                >  1:4338490/1‑150 (MQ=18)

                                                 ggaaattaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAacac                                                <  1:715181/150‑1 (MQ=17)

                                                 ggaaattaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCACCATAGGTAACAAGCGATAACTAAGCAATATGATGTTGCGAGATGGACGTTCTTTCTGTTATGAACCTCAAGGGAAacac                                                >  2:4464754/1‑150 (MQ=11)

                                                  gaaattaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACt                                               <  1:131622/150‑1 (MQ=17)

                                                  gaaattaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACt                                               >  2:3024158/1‑150 (MQ=17)

                                                   aaattaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTc                                              <  1:2154548/150‑1 (MQ=17)

                                                   aaattaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTc                                              >  2:2334478/1‑150 (MQ=17)

                                                   aaattaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTc                                              >  2:1399163/1‑150 (MQ=17)

                                                    aattaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCg                                             >  1:40007/1‑150 (MQ=17)

                                                    aattaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCg                                             >  1:1876555/1‑150 (MQ=17)

                                                    aattaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCg                                             >  2:3379018/1‑150 (MQ=17)

                                                    aattaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCg                                             >  1:4336477/1‑150 (MQ=17)

                                                     attaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGt                                            >  1:1568853/1‑150 (MQ=17)

                                                     attaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGt                                            >  1:1990714/1‑150 (MQ=17)

                                                      ttaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAACATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGtt                                           <  1:3448858/150‑1 (MQ=14)

                                                      ttaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGtt                                           >  2:693092/1‑150 (MQ=17)

                                                      ttaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGtt                                           <  2:3184120/150‑1 (MQ=17)

                                                      ttaggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGtt                                           >  1:3513648/1‑150 (MQ=17)

                                                       taggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGttt                                          <  2:1057842/150‑1 (MQ=18)

                                                        aggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTg                                         <  2:19434/150‑1 (MQ=17)

                                                        aggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTg                                         <  2:126616/150‑1 (MQ=17)

                                                        aggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTg                                         <  2:3455912/150‑1 (MQ=17)

                                                         ggaaatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGa                                        <  1:184885/150‑1 (MQ=17)

                                                           aaatAAACTTTGAACCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTGGAACCTCAAGGGAAACACTCGTTTGATa                                      <  1:1453271/150‑1 (MQ=12)

                                                            aatAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATaa                                     <  2:1857285/150‑1 (MQ=17)

                                                             atAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATaaa                                    <  1:1909298/150‑1 (MQ=17)

                                                             atAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATaaa                                    <  1:2630305/150‑1 (MQ=17)

                                                              tAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAg                                   >  2:3702820/1‑150 (MQ=17)

                                                              tAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAg                                   >  2:1149693/1‑150 (MQ=17)

                                                              tAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAg                                   >  1:2300149/1‑150 (MQ=17)

                                                               aaaCTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGc                                  >  1:1024153/1‑150 (MQ=17)

                                                                aaCTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCg                                 >  1:789919/1‑150 (MQ=17)

                                                                 aCTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGt                                <  2:320482/150‑1 (MQ=17)

                                                                 aCTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGt                                >  2:1910555/1‑150 (MQ=17)

                                                                 aCTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGt                                >  1:602628/1‑150 (MQ=17)

                                                                  cTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGtc                               >  1:780948/1‑150 (MQ=17)

                                                                  cTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGtc                               >  1:1283488/1‑150 (MQ=17)

                                                                    ttGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTTATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGtctc                             <  2:4008595/150‑1 (MQ=17)

                                                                    ttGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGtctc                             <  2:2262402/150‑1 (MQ=17)

                                                                     tGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCa                            >  1:256503/1‑150 (MQ=17)

                                                                     tGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCa                            >  1:2395134/1‑150 (MQ=17)

                                                                     tGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCa                            >  2:2288913/1‑150 (MQ=17)

                                                                     tGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCa                            >  2:1691321/1‑150 (MQ=17)

                                                                     tGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCa                            <  1:2464094/150‑1 (MQ=17)

                                                                      gAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCaa                           >  2:2148848/1‑150 (MQ=17)

                                                                       aGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAAt                          <  1:4535493/150‑1 (MQ=17)

                                                                       aGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGGCTCAAt                          >  1:4123159/1‑150 (MQ=17)

                                                                        gCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATg                         >  2:4370561/1‑150 (MQ=17)

                                                                        gCCAATTGGGGCTTAGCTTTAAGCGTTTCACTAAAATGCAATACGCCCCAGGGGTAACAAGCGACAACTAAGCAATCTGCTGTTGCGGGATGGACGTTGTTTCGGTTTTGAACATTAAGTGAAACAGTCGTTTTATTAGGTGtctacctg                         >  2:313295/1‑145 (MQ=11)

                                                                         ccAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATgg                        >  2:3929889/1‑150 (MQ=17)

                                                                          cAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGATGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGt                       >  2:1692861/1‑150 (MQ=17)

                                                                          cAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGt                       >  2:2869076/1‑150 (MQ=17)

                                                                           aaTTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGtt                      >  1:1217998/1‑150 (MQ=17)

                                                                           aaTTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGGACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGGTGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGtt                      <  1:3901096/150‑1 (MQ=12)

                                                                            aTTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGtta                     >  1:1528173/1‑149 (MQ=17)

                                                                            aTTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGtta                     >  1:3120447/1‑149 (MQ=17)

                                                                              tGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGttatc                   >  2:911789/1‑147 (MQ=14)

                                                                              tGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGttatc                   >  1:1741780/1‑147 (MQ=17)

                                                                              tGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGCTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGttatc                   >  2:4243718/1‑147 (MQ=12)

                                                                               ggTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCa                  <  1:4419884/150‑1 (MQ=17)

                                                                                 tGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGt                <  2:1867778/150‑1 (MQ=17)

                                                                                  gCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGta               <  2:3877289/150‑1 (MQ=12)

                                                                                  gCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGta               <  1:334022/150‑1 (MQ=12)

                                                                                    ttAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGtaaa             <  1:1075199/150‑1 (MQ=12)

                                                                                     tAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGtaaat            <  1:45863/150‑1 (MQ=12)

                                                                                     tAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGtaaat            >  1:554512/1‑150 (MQ=12)

                                                                                     tAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGACGTTGCGCGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGtaaat            <  2:4324543/150‑1 (MQ=255)

                                                                                      aGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGATGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGtaaata           <  1:1692861/150‑1 (MQ=255)

                                                                                      aGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGtaaata           <  2:339264/150‑1 (MQ=12)

                                                                                      aGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGtaaata           >  1:225227/1‑150 (MQ=12)

                                                                                      aGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGtaaata           <  2:3888414/150‑1 (MQ=12)

                                                                                       gCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGtaaataa          <  1:1889959/150‑1 (MQ=12)

                                                                                        cTTTAAGCGTTTCACTAAAATGCAGTACTCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGtaaataaa         <  2:2614777/150‑1 (MQ=12)

                                                                                        cTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGtaaataaa         >  2:1631482/1‑150 (MQ=18)

                                                                                        cTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGtaaataaa         >  2:3610233/1‑150 (MQ=12)

                                                                                        cTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGtaaataaa         <  1:1661060/150‑1 (MQ=12)

                                                                                          ttAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACa       >  1:2281064/1‑150 (MQ=12)

                                                                                          ttAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACa       <  2:1450479/150‑1 (MQ=12)

                                                                                           tAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACaa      <  2:2964313/150‑1 (MQ=12)

                                                                                           tAAGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACaa      >  1:3652187/1‑150 (MQ=12)

                                                                                            aaGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACaaa     >  2:2020920/1‑150 (MQ=17)

                                                                                             aGCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACaaaa    <  2:608963/150‑1 (MQ=12)

                                                                                              gCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACaaaaa   <  2:3156788/150‑1 (MQ=9)

                                                                                              gCGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGAAAATAAACaaaaa   <  2:4112413/150‑1 (MQ=9)

                                                                                               cGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAAc  <  1:2584198/150‑1 (MQ=2)

                                                                                               cGTTTCACTAAAATGCAGTACGCCCCATAGGTAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAAc  >  2:3317125/1‑150 (MQ=2)

ATACTCGGTAAGAGGGCATTACAACGGCGGACAAAGCGAGAATATTCTAGGAAATTAGGAAATAAACTTTGAGCCAATTGGTGCTTAGCTTTAAGCGTTTCACTAAAATGCAGTACGCCCCATAGATAACAAGCGATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTGTCAGTAAATAAACAAAAAC  >  CP043523/1890959‑1891203

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`