Predicted mutation
evidence seq id position mutation annotation gene description
RA CP043523 1,891,241 C→A intergenic (‑11/‑139) FTN78_chr1940 ← / → FTN78_chr1941 Mobile element protein/Permease of the drug/metabolite transporter (DMT) superfamily

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0435231,891,2410CA99.1% 1036.1 / ‑0.5 456intergenic (‑11/‑139)FTN78_chr1940/FTN78_chr1941Mobile element protein/Permease of the drug/metabolite transporter (DMT) superfamily
Reads supporting (aligned to +/- strand):  ref base C (3/1);  new base A (213/238);  total (216/240)
Fisher's exact test for biased strand distribution p-value = 3.50e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 460 total aligned reads displayed.

ATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGCGCTTTCTAATGCTTAGTGGGTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAATATAATGATG  >  CP043523/1891094‑1891335
                                                                                                                                                   |                                                                                              
aTAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTgagc                                                                                              >  2:1031966/1‑150 (MQ=17)
 tAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCt                                                                                             >  1:339788/1‑150 (MQ=12)
  aaCTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCtt                                                                                            >  1:3019348/1‑150 (MQ=12)
   aCTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCttt                                                                                           <  2:696443/150‑1 (MQ=17)
   aCTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCttt                                                                                           >  1:2519526/1‑150 (MQ=12)
    cTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTc                                                                                          <  1:2012248/150‑1 (MQ=12)
     tAAGCAATCTGATGTTGCTAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATCGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCt                                                                                         <  2:4228537/150‑1 (MQ=255)
          aaTCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGc                                                                                    <  1:193726/150‑1 (MQ=12)
            tCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCtt                                                                                  >  1:72840/1‑150 (MQ=17)
             cTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTa                                                                                 >  2:1067994/1‑150 (MQ=12)
               gATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGAGAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGt                                                                               >  2:3880743/1‑150 (MQ=12)
                 tGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTgc                                                                             <  2:2763465/150‑2 (MQ=12)
                   ttGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTgctt                                                                           <  1:4144817/150‑4 (MQ=255)
                    tGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTgcttt                                                                          <  1:2560518/150‑5 (MQ=255)
                      cGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTgctttaa                                                                        <  2:679109/150‑7 (MQ=255)
                       gagaTGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCTGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGCGCTTTCTAATGCTTAGTgcttgaag                                                                       <  2:3809402/150‑8 (MQ=255)
                       gagaTGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTgctttaag                                                                       <  1:2707745/150‑8 (MQ=11)
                             gACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAgg                                                                 >  2:787567/1‑150 (MQ=255)
                                    tttCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCAc                                                          >  1:4247774/1‑150 (MQ=11)
                                    tttCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCAc                                                          <  1:432386/150‑1 (MQ=11)
                                      tCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGa                                                        <  1:445355/150‑1 (MQ=255)
                                       cGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGAc                                                       <  1:3940536/150‑1 (MQ=11)
                                         gTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACtt                                                     >  1:245891/1‑150 (MQ=11)
                                           tttGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACttat                                                   <  2:3120447/150‑1 (MQ=11)
                                           tttGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACttat                                                   <  2:2038328/150‑1 (MQ=11)
                                            ttGAACCTCAAGGGAAACACTCGTTTGATAAGGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGATATTATACGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACttatt                                                  <  2:4338490/150‑1 (MQ=11)
                                               aaCCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACttatttat                                               <  2:2300130/150‑1 (MQ=255)
                                               aaCCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACttatttat                                               >  1:924979/1‑150 (MQ=11)
                                               aaCCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACttatttat                                               <  2:3449881/150‑1 (MQ=11)
                                                aCCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTtatttatt                                              <  2:1863065/150‑1 (MQ=11)
                                                aCCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTtatttatt                                              >  2:1274493/1‑150 (MQ=11)
                                                 ccTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTatttattt                                             >  1:2096625/1‑150 (MQ=255)
                                                 ccTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTatttatttn                                            <  2:628437/150‑2 (MQ=11)
                                                  cTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTAtttt                                            <  2:2797153/150‑1 (MQ=255)
                                                       gggAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAAt                                       >  1:2817530/1‑150 (MQ=11)
                                                        ggAAACACTCGTTTGATAAAGCGTCTCAATGGTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATg                                      <  1:49307/150‑1 (MQ=11)
                                                        ataaaCACTCGTTTGATAGAGCGTCTGAATGTTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAATTCGTTAGCTTTCTAATGCTTAGTGCTTTAAGATTAGTATAGCACGACTTATTTATTTTCCAATg                                      <  2:320607/148‑1 (MQ=1)
                                                                               tctcAATGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTaa               >  1:3184129/1‑150 (MQ=2)
                                                                               tctcAATGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTaa               >  2:853580/1‑150 (MQ=2)
                                                                               tctcAATGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTaa               <  2:2413268/150‑1 (MQ=2)
                                                                               tctcAATGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGCCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTaa               >  2:3634854/1‑150 (MQ=255)
                                                                                ctcAATGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTaaa              >  1:2379261/1‑150 (MQ=12)
                                                                                ctcAATGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTaaa              >  2:2164382/1‑150 (MQ=9)
                                                                                ctcAATGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTaaa              >  1:1477289/1‑150 (MQ=9)
                                                                                ctcAATGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTaaa              >  1:1404175/1‑150 (MQ=9)
                                                                                 tcAATGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTaaaa             <  2:1545454/150‑1 (MQ=255)
                                                                                 tcAATGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTaaaa             >  2:3521662/1‑150 (MQ=255)
                                                                                 tcAATGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTaaaa             <  1:2661283/150‑1 (MQ=255)
                                                                                  cAATGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTaaaaa            <  1:2956282/150‑1 (MQ=12)
                                                                                  cAATGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTaaaaa            <  2:410113/150‑1 (MQ=255)
                                                                                  cAATGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTaaaaa            <  2:1335868/150‑1 (MQ=12)
                                                                                   aaTGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAat           >  2:3190801/1‑150 (MQ=255)
                                                                                   aaTGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAat           <  2:4057869/150‑1 (MQ=255)
                                                                                   aaTGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAat           >  2:4442363/1‑150 (MQ=255)
                                                                                   aaTGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAat           >  2:4599753/1‑150 (MQ=255)
                                                                                   aaTGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAat           >  1:865068/1‑150 (MQ=255)
                                                                                   aaTGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAat           <  2:925497/150‑1 (MQ=255)
                                                                                   aaTGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAat           <  1:1691901/150‑1 (MQ=255)
                                                                                   aaTGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAat           <  1:2937683/150‑1 (MQ=255)
                                                                                   aaTGGTTGTCAGTAAATAAACAAAAACTTTTAGAAGTTTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTTATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTATCTAGCAATTCGGGTaaaaan           <  2:2632810/150‑2 (MQ=11)
                                                                                    aTGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAata          >  2:1636568/1‑150 (MQ=255)
                                                                                    aTGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAata          >  1:1794135/1‑150 (MQ=255)
                                                                                    aTGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAata          >  2:574309/1‑150 (MQ=255)
                                                                                    aTGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAata          >  1:1056407/1‑150 (MQ=255)
                                                                                     tGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatat         <  2:2456381/150‑1 (MQ=255)
                                                                                      ggTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatc        <  1:1290009/150‑2 (MQ=255)
                                                                                      ggTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatc        <  2:3008834/150‑2 (MQ=255)
                                                                                      ggTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTagaaagttt        <  2:1741780/150‑5 (MQ=1)
                                                                                      ggTTATCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTagaaagttt        >  2:594220/1‑146 (MQ=11)
                                                                                       gTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTCGTGCTTGAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatca       >  2:4310673/1‑148 (MQ=11)
                                                                                       gTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatca       >  2:1435240/1‑148 (MQ=255)
                                                                                       gTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatca       >  1:1185729/1‑148 (MQ=255)
                                                                                       gTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatca       <  1:3268901/150‑3 (MQ=255)
                                                                                        ttGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaa      <  1:2297664/150‑4 (MQ=11)
                                                                                        ttGTCAGTAAATAAACAAAAACTATTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaa      <  1:4433590/150‑4 (MQ=11)
                                                                                        ntGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaa      >  2:3369391/2‑147 (MQ=11)
                                                                                         tGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaag     >  1:4034860/1‑146 (MQ=255)
                                                                                         tGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaag     <  2:3235297/150‑5 (MQ=11)
                                                                                         tGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaag     <  1:1528077/150‑5 (MQ=11)
                                                                                         tGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaag     >  1:2772053/1‑146 (MQ=255)
                                                                                         tGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaag     >  2:2064283/1‑146 (MQ=11)
                                                                                         tGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAAATCGGGTAAAAatatcaag     >  2:2921432/1‑146 (MQ=11)
                                                                                          gTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAACatatcaagt    >  1:4493893/1‑145 (MQ=11)
                                                                                          gTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaagt    >  2:4180624/1‑145 (MQ=11)
                                                                                          gTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaagt    >  2:1524658/1‑145 (MQ=255)
                                                                                          gTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaagt    >  1:1709986/1‑145 (MQ=11)
                                                                                          gTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaagt    >  1:3509763/1‑145 (MQ=11)
                                                                                          gTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaagt    >  1:3711281/1‑145 (MQ=11)
                                                                                          gTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaagt    >  2:2851066/1‑145 (MQ=11)
                                                                                          gTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATCCGGGTAAAAatatcaagt    >  1:4190391/1‑145 (MQ=11)
                                                                                          gTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATGAACTCGCAATTCGGGTAAAAatatcaagt    >  2:4535465/1‑145 (MQ=11)
                                                                                           tCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaagta   <  2:1199069/150‑7 (MQ=11)
                                                                                           tCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaagta   >  2:2117788/1‑144 (MQ=11)
                                                                                           tCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaagta   >  1:634151/1‑144 (MQ=11)
                                                                                           tCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaagta   >  1:1836704/1‑144 (MQ=11)
                                                                                           tCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaagta   <  1:1101938/150‑7 (MQ=11)
                                                                                            cAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaagtac  <  2:1937965/150‑8 (MQ=11)
                                                                                            cAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaagtac  <  1:3835403/150‑8 (MQ=11)
                                                                                            cAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaagtac  >  1:2621691/1‑143 (MQ=11)
                                                                                            cAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGAGCTTTCTAATGCTTAGTGCTTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAatatcaagtac  >  1:1879873/1‑143 (MQ=11)
                                                                                                                                                   |                                                                                              
ATAACTAAGCAATCTGATGTTGCGAGATGGACGTTCTTTCGGTTTTGAACCTCAAGGGAAACACTCGTTTGATAAAGCGTCTCAATGGTTGTCAGTAAATAAACAAAAACTTTTGGAAGTGTGCTATTATAAGTCATATAAGTCGTGCGCTTTCTAATGCTTAGTGGGTTAAGATTAGGATAGCACGACTTATTTATTTTCCAATGAAATTAACTAGCAATTCGGGTAAAAATATAATGATG  >  CP043523/1891094‑1891335

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: