BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP043523	1,848,844	T→C	intergenic (+352/+392)	FTN78_chr1898 → / ← FTN78_chr1899	Cold shock protein of CSP family/Type I restriction‑modification system, restriction subunit R

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP043523	1,848,844	0	T	C	100.0%	1396.0 / NA	393	intergenic (+352/+392)	FTN78_chr1898/FTN78_chr1899	Cold shock protein of CSP family/Type I restriction‑modification system, restriction subunit R
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (203/190); total (203/190)

Only 100 of 393 total aligned reads displayed.

AGTTAATTATCAAGTCATGGCTAAATAATCAACTAGCAATTCGGG‑‑TATTAATATATCTATAAATTGTTGTTCTAGAAACTCCCCAAGAATCCGCAATCGATTTAATTTGTGTTCCACTTTCTATCAATGTTTTAAGAAGCTTAACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAATAAATGCAAATGATTTTAATAATCTTAATAAGAAAAGAAGAGTG  >  CP043523/1848714‑1848990

tatcgggtATCAAGTCATGGCTAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTc                                                                                                                                   <  1:2587929/143‑1 (MQ=25)

  tcgggtATCAAGTCATGGCTAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCtt                                                                                                                                 <  1:3314148/145‑1 (MQ=25)

   cgggtATCAAGTCATGGCTAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCttt                                                                                                                                >  2:2964571/5‑150 (MQ=37)

   cgggtATCAAGTCATGGCTAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCttt                                                                                                                                >  2:4025453/5‑150 (MQ=37)

      gtATCAAGTCATGGCTAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTAtt                                                                                                                             <  2:3330778/149‑1 (MQ=37)

      gtATCAAGTCATGGCTAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTAtt                                                                                                                             >  2:2762552/2‑150 (MQ=37)

      gtATCAAGTCATGGCTAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTAtt                                                                                                                             >  2:2789031/2‑150 (MQ=37)

      gtATCAAGTCATGGCTAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCAGCAATCGTTTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTCCGTCTTTAtt                                                                                                                             >  2:3299631/2‑150 (MQ=37)

         tCAAGTCATGGCTAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATtcct                                                                                                                          <  2:834676/150‑1 (MQ=37)

          cAAGTCATGGCTAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATtcctc                                                                                                                         <  1:489297/150‑1 (MQ=38)

          cAAGTCATGGCTAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATtcctc                                                                                                                         <  2:1189320/150‑1 (MQ=38)

             gTCATGGCTAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCAt                                                                                                                      >  2:1377170/1‑150 (MQ=38)

             gTCATGGCTAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCAt                                                                                                                      <  1:3204545/150‑1 (MQ=38)

              tCATGGCTAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCAtt                                                                                                                     >  1:605502/1‑150 (MQ=255)

              tCATGGCTAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCAtt                                                                                                                     <  2:2995166/150‑1 (MQ=255)

              tCATGGCTAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCAtt                                                                                                                     <  2:721710/150‑1 (MQ=255)

              tCATGGCTAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCAtt                                                                                                                     >  1:2796866/1‑150 (MQ=255)

                  ggCTAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATa                                                                                                                 >  1:4428254/1‑150 (MQ=255)

                     tAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTa                                                                                                              <  1:1661985/150‑1 (MQ=255)

                     tAAATAATCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTa                                                                                                              <  2:2471260/150‑1 (MQ=255)

                       aataatCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTAtt                                                                                                            <  2:3245881/150‑1 (MQ=255)

                       aataatCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTAtt                                                                                                            <  1:2762827/150‑1 (MQ=255)

                          aatCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTa                                                                                                         >  2:473864/1‑150 (MQ=255)

                          aatCAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTa                                                                                                         >  1:2653279/1‑150 (MQ=255)

                             cAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCa                                                                                                      >  2:2647677/1‑150 (MQ=255)

                             cAACTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCa                                                                                                      >  2:3504882/1‑150 (MQ=255)

                                cTAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATaa                                                                                                   <  1:1986680/150‑1 (MQ=255)

                                 tAGCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAAc                                                                                                  >  2:2233223/1‑150 (MQ=255)

                                   gCAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTATCATAACtt                                                                                                >  1:2914553/1‑150 (MQ=255)

                                    cAATTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTg                                                                                               <  1:184378/150‑1 (MQ=255)

                                     aaTTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGa                                                                                              >  2:1557822/1‑150 (MQ=255)

                                     aaTTCGGGTTTATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGa                                                                                              >  2:3452451/1‑150 (MQ=255)

                                         cgggtttATTAATATATCTATAAATTGTTGTTCTAGAAAGTCCTCAAGAATCCGCAATCGATTTAATTCGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATAGTATGGTACCATAACTTGAAAGc                                                                                          >  2:4232153/7‑150 (MQ=255)

                                           ggtttATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCAc                                                                                        >  2:1080662/5‑150 (MQ=255)

                                           ggtttATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCAc                                                                                        >  1:2684937/5‑150 (MQ=255)

                                            gtttATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACt                                                                                       >  2:1785731/4‑150 (MQ=255)

                                            gtttATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACt                                                                                       <  2:3145960/147‑1 (MQ=255)

                                              ttATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACttn                                                                                     <  2:4157302/149‑2 (MQ=255)

                                               tATTAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTtat                                                                                    <  1:970711/150‑1 (MQ=255)

                                                 ttAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTtatat                                                                                  <  1:1368684/150‑1 (MQ=255)

                                                 ttAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTtatat                                                                                  >  1:2500011/1‑150 (MQ=255)

                                                  tAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTtatata                                                                                 <  2:3708725/150‑1 (MQ=255)

                                                  tAATATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTtatata                                                                                 <  1:3300129/150‑1 (MQ=255)

                                                   aaTATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATaa                                                                                <  1:356044/150‑1 (MQ=255)

                                                   aaTATATCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATaa                                                                                >  2:587948/1‑150 (MQ=255)

                                                    atatatCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATaaa                                                                               <  1:638133/150‑1 (MQ=255)

                                                     tatatCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCGTAACTTGAAAGCACTTATATAAAt                                                                              >  1:3936432/1‑150 (MQ=255)

                                                     tatatCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAAt                                                                              <  2:2824271/150‑1 (MQ=255)

                                                     tatatCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACAAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAAt                                                                              >  2:1848063/1‑150 (MQ=255)

                                                      atatCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATg                                                                             >  2:552936/1‑150 (MQ=255)

                                                      atatCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATg                                                                             <  1:1897043/150‑1 (MQ=255)

                                                        ntCTATAAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGaa                                                                           >  2:948167/2‑150 (MQ=255)

                                                            ataAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATa                                                                       >  1:895560/1‑150 (MQ=255)

                                                             taAATTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAg                                                                      >  1:2145066/1‑150 (MQ=255)

                                                               aaTTGTTGTTCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGaa                                                                    >  2:4000498/1‑150 (MQ=255)

                                                                atacttgttCTAGAAACTCCACAAGAATCCGCAATCGATAGAATTGGTGTTCAACTTTCTACCAATGTCTTAAGAATCTTTACGTATTTATTCCTCCATTGATACTATTGTACCATAACTTGAAATCACTTATATAAATGAAAATAGAAt                                                                   >  2:2579559/5‑150 (MQ=255)

                                                                    ttgttCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAAt                                                               <  1:3960493/150‑1 (MQ=255)

                                                                      gttCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTa                                                             >  2:2984109/1‑150 (MQ=255)

                                                                       ttCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTAc                                                            <  2:2028461/150‑1 (MQ=255)

                                                                        tCTAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACg                                                           >  2:1099223/1‑150 (MQ=255)

                                                                          tAGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACggg                                                         >  1:3383056/1‑150 (MQ=255)

                                                                           aGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGt                                                        <  1:344765/150‑1 (MQ=255)

                                                                           aGAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGt                                                        >  1:284219/1‑150 (MQ=255)

                                                                           aGAAACTCCTCAAGAATCCGCAATCGATCTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGt                                                        >  1:1128206/1‑150 (MQ=255)

                                                                            gAAACTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGtt                                                       >  1:1422928/1‑150 (MQ=255)

                                                                             aaaCTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTa                                                      >  1:1186328/1‑150 (MQ=255)

                                                                               aCTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAAt                                                    <  2:2149877/150‑1 (MQ=255)

                                                                               aCTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAAt                                                    <  2:189042/150‑1 (MQ=255)

                                                                               aCTCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAAt                                                    <  2:3616193/150‑1 (MQ=255)

                                                                                ctcctcAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATg                                                   >  2:4426185/1‑150 (MQ=255)

                                                                                ctcctcAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATg                                                   <  1:2981453/150‑1 (MQ=255)

                                                                                 tCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGa                                                  >  2:1242821/1‑150 (MQ=255)

                                                                                 tCCTCAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGa                                                  >  1:369407/1‑150 (MQ=255)

                                                                                    tcAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACa                                               >  1:1082/2‑150 (MQ=255)

                                                                                    tcAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACa                                               >  1:4169956/2‑150 (MQ=255)

                                                                                    tcAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACa                                               >  1:447144/2‑150 (MQ=255)

                                                                                    tcAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACa                                               <  2:3988223/149‑1 (MQ=255)

                                                                                     cAAGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACaa                                              <  1:4529784/150‑1 (MQ=255)

                                                                                      aaGAATCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACaag                                             <  1:228793/150‑2 (MQ=255)

                                                                                          aTCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAAt                                         >  2:1057788/1‑150 (MQ=255)

                                                                                          aTCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAAt                                         >  1:1759183/1‑150 (MQ=255)

                                                                                           tCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAATg                                        <  2:1319167/150‑1 (MQ=255)

                                                                                           tCCGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAATg                                        <  1:1021148/150‑1 (MQ=255)

                                                                                             cGCAATCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAATgta                                      <  2:1418702/150‑3 (MQ=255)

                                                                                                aaTCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAATGTAAAt                                   >  2:4306678/1‑150 (MQ=255)

                                                                                                aaTCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAATGTAAAt                                   <  1:3135572/150‑1 (MQ=255)

                                                                                                 aTCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAATGTAAATg                                  <  1:2428004/150‑1 (MQ=255)

                                                                                                 aTCGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAATGTAAATg                                  >  2:2665081/1‑150 (MQ=255)

                                                                                                   cGATTTAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAATGTAAATGAt                                >  2:3823445/1‑150 (MQ=255)

                                                                                                      tttAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAATGTAAATGAtctt                             >  1:695972/1‑147 (MQ=255)

                                                                                                      tttAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAATGTAAATGAtctt                             >  1:270291/1‑147 (MQ=255)

                                                                                                        tAATTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTCAATGAACAAGAAATGTAAATGAtcttga                           >  2:4352917/1‑148 (MQ=255)

                                                                                                         aaTTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAATGTAAATGAtcttgag                          <  1:4350728/150‑7 (MQ=255)

                                                                                                         aaTTGGTGTTCCACTTTCTACCAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAATGTAAATGAtcttgag                          <  1:3497850/150‑7 (MQ=255)

                                                                                                                              cAATGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAATGTAAATGATCTTGAGAGTTTTTATAACAAAagaaga     >  2:30297/1‑150 (MQ=255)

                                                                                                                               aaTGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAATGTAAATGATCTTGAGAGTTTTTATAACAAAAGAagag    >  2:1975171/1‑150 (MQ=255)

                                                                                                                                aTGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAATGTAAATGATCTTGAGAGTTTTTATAACAAAAGAAGAgt   <  2:437040/150‑1 (MQ=255)

                                                                                                                                aTGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAATGTAAATGATCTTGAGAGTTTTTATAACAAAAGAAGAgt   >  2:3207519/1‑150 (MQ=255)

                                                                                                                                aTGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAATGTAAATGATCTTGAGAGTTTTTATAACAAAAGAAGAgt   <  2:2368208/150‑1 (MQ=255)

                                                                                                                                 tGTCTTAAGAAGCTTTACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAAGAAATGTAAATGATCTTGAGAGTTTTTATAACAAAAGAAGAgtg  >  2:789353/1‑150 (MQ=255)

AGTTAATTATCAAGTCATGGCTAAATAATCAACTAGCAATTCGGG‑‑TATTAATATATCTATAAATTGTTGTTCTAGAAACTCCCCAAGAATCCGCAATCGATTTAATTTGTGTTCCACTTTCTATCAATGTTTTAAGAAGCTTAACGTCTTTATTCCTCCATTGATACTATTGTACCATAACTTGAAAGCACTTATATAAATGAACATAGAATAAATTACGGGTTAATGAACAATAAATGCAAATGATTTTAATAATCTTAATAAGAAAAGAAGAGTG  >  CP043523/1848714‑1848990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`