Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP043523 | 533,440 | C→T | P125P (CCC→CCT) | FTN78_chr0575 → | Permease of the drug/metabolite transporter (DMT) superfamily |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP043523 | 533,440 | 0 | C | T | 99.4% | 1646.1 / ‑5.5 | 499 | P125P (CCC→CCT) | FTN78_chr0575 | Permease of the drug/metabolite transporter (DMT) superfamily |
Reads supporting (aligned to +/- strand): ref base C (0/3); new base T (265/230); total (266/233) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.02e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 499 total aligned reads displayed.
TTTTTTTGATGTCTGGAAATCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCCGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAATATCAAACATTTATCAATCAGTCCCCTAGCTCT > CP043523/533293‑533586 | ttttGATGTCTGGAAATCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGtttt < 2:3481813/150‑1 (MQ=255) ttGATGTCTGGAAATCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTtta < 1:2237573/150‑1 (MQ=255) ttGATGTCTGGAAATCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTtta < 1:2351322/150‑1 (MQ=255) tGATGTCTGGAAATCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTttat > 2:1336983/1‑150 (MQ=255) gATGTCTGGAAATCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTttatt > 1:1853857/1‑150 (MQ=255) aTGTCTGGAAATCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCAGTTTttatta > 1:4398532/1‑150 (MQ=255) gTCTGGAAATCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATg > 1:2292524/1‑150 (MQ=255) gTCTGGAAATCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATg > 1:1226172/1‑150 (MQ=255) tCTGGAAATCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGc < 2:685919/150‑1 (MQ=255) tCTGGAAATCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGc < 2:1877398/150‑1 (MQ=255) tCTGGAAATCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGc < 1:2547956/150‑1 (MQ=255) cTGGAAATCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCt > 2:1417674/1‑150 (MQ=255) cTGGAAATCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCt < 2:2363693/150‑1 (MQ=255) naaaTCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCttta > 2:2635200/2‑150 (MQ=255) gAAATCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCttta > 1:1345819/1‑150 (MQ=255) aaaTCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCtttat > 1:2399076/1‑150 (MQ=255) aaaTCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCtttat > 2:1706232/1‑150 (MQ=255) aTCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCtttattt < 2:2105766/150‑1 (MQ=255) tCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCtttattta < 1:310296/150‑1 (MQ=255) aaaaaaGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACt > 1:3030047/1‑150 (MQ=255) aaaaaaGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACt < 1:382918/150‑1 (MQ=255) aaaaaGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTc < 2:3951913/150‑1 (MQ=255) aaaaaGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTc > 1:1248985/1‑150 (MQ=255) aaaaaGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTc < 1:3965163/150‑1 (MQ=255) gAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCAtttt < 1:1511840/150‑1 (MQ=255) aaTATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCAttttt < 1:448930/150‑1 (MQ=255) aaTATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCAttttt < 2:3121627/150‑1 (MQ=255) atatGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTc > 1:2123661/1‑150 (MQ=255) atatGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTc > 1:1010364/1‑150 (MQ=255) tatGCCAACCCTCTTTTTGTATGTTTTTGTTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCa > 2:2259368/1‑150 (MQ=255) tatGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTATTCATTTTTCa > 2:2192557/1‑150 (MQ=255) tatGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCa > 2:4344320/1‑150 (MQ=255) aaCCCTCTTTTAGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCa > 2:4054922/1‑150 (MQ=255) aCCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCaa > 1:370800/1‑150 (MQ=255) aCCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCaa < 1:95258/150‑1 (MQ=255) ctctTTTTTTTTTTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTa > 2:3525170/1‑150 (MQ=255) ctctTTTTGTTTGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTa > 2:561141/1‑150 (MQ=255) ctctTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTa > 2:3229961/1‑150 (MQ=255) tctTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTAc < 2:1201428/150‑1 (MQ=255) ctTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTAcc < 1:3541769/150‑1 (MQ=255) ttGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCaaaa < 1:2616340/150‑1 (MQ=255) ttGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCaaaa > 1:1734169/1‑150 (MQ=255) gTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAAcc > 2:1991508/1‑150 (MQ=255) tATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAAccc > 1:1461688/1‑150 (MQ=255) tATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAAccc > 1:4165518/1‑150 (MQ=255) gtggGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCt > 2:1287056/1‑150 (MQ=255) gtggGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCt > 1:345227/1‑150 (MQ=255) ggTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTAtt < 1:1788367/150‑1 (MQ=255) aTTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGt > 2:1955816/1‑150 (MQ=255) tttCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTAGCAAAACCCAAATCGGTCTTATTCGTCa > 1:4069976/1‑150 (MQ=255) tttCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCa < 1:3636406/150‑1 (MQ=255) cTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCAttt > 1:4584654/1‑150 (MQ=255) cTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCAAAATCGGTCTTATTCGTCAttt > 2:1786961/1‑150 (MQ=255) gTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTa < 1:533699/150‑1 (MQ=255) gTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTa > 1:1121346/1‑150 (MQ=255) ttCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAg > 1:73075/1‑150 (MQ=255) tCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGc > 2:2828694/1‑150 (MQ=255) cAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCa < 1:2174850/150‑1 (MQ=255) aaTATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCaa < 2:3025538/150‑1 (MQ=255) tatTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATg < 2:3741635/150‑1 (MQ=255) tatTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATg < 2:1088872/150‑1 (MQ=255) tttttATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGAt > 1:1602529/1‑150 (MQ=255) tttttATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGAt < 2:3986835/150‑1 (MQ=255) ttttATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCCGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATa < 1:4529590/150‑1 (MQ=255) tattatGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGgt > 1:3384940/1‑150 (MQ=255) attatGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGgtg < 2:3436199/150‑1 (MQ=255) gtgGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGttttt < 2:4399322/150‑1 (MQ=255) ccATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTttgt < 2:1598544/150‑1 (MQ=255) aTTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTttgttg > 1:1193811/1‑150 (MQ=255) aTTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTttgttg > 2:3168959/1‑150 (MQ=255) tCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGAt > 2:922926/1‑150 (MQ=255) tCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGAt < 2:3592331/150‑1 (MQ=255) cAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGAtt < 2:1228509/150‑1 (MQ=255) aaCTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTCTCAACGGCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGAttg > 2:4321594/1‑149 (MQ=255) cTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTacg < 1:4286759/150‑1 (MQ=255) tCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTacggac > 1:90563/1‑150 (MQ=255) aaaTAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTTTTCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTacggacgg > 2:3200079/1‑150 (MQ=255) aaTAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTAcggacgga > 2:2960403/1‑150 (MQ=255) tAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGaaa < 1:651026/150‑1 (MQ=255) aGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAat > 1:3516608/1‑150 (MQ=255) gTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCATAACCCAATTCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAata < 2:253578/150‑1 (MQ=255) gTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAata > 2:2875457/1‑150 (MQ=255) cTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAATATCa > 1:4545104/1‑150 (MQ=255) cAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTTAACCTCCAGTTCCCAAACCCAAATCGGTCTTATTTGTTCTTTTAGCAAAGATAGGTGTTTTTTTTTTTATTGCGGACGGAAATATCAAAc > 1:1919480/1‑150 (MQ=17) cGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAATATCAAACAtt > 2:802688/1‑150 (MQ=255) cGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAATATCAAACAtt > 1:3768599/1‑150 (MQ=255) gACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAATATCAAACAttt < 1:3201317/150‑1 (MQ=255) gcAATTTTACAATCTTCAGCACCTGTTTTTATTATGCTTTATTTCCTCATTTTTCAGCGTCAAGTACCAAAGCACAAGTCGGTCTTATACGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAATATCAAACATTTa < 2:1248985/149‑1 (MQ=18) aaTTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAATATCAAACATTTatc > 1:3298549/1‑150 (MQ=255) tttACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAATATCAAACATTTatcaat < 2:3687047/150‑1 (MQ=255) ttACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAATATCAAACATTTatcaatc > 2:3891340/1‑150 (MQ=255) tACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAATATCAAACATTTatcaatca < 2:3728828/150‑1 (MQ=255) tACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAATATCAAACATTTatcaatca < 2:4165001/150‑1 (MQ=255) atatACAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAATATCAAACATTTATCAATCAGTcc < 1:1690933/150‑1 (MQ=255) tataCAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAATATCAAACATTTATCAATCAGTccc < 2:3789045/150‑1 (MQ=255) ataCAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAATATCAAACATTTATCAATCAGTcccc > 2:1550521/1‑150 (MQ=255) taCAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTTATTACGGACGGAAATATCAAACATTTATCAATCAGTCCCCt > 2:4537253/1‑150 (MQ=255) aCAGCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAATATCAAACATTTATCAATCAGTCCCCTa < 1:2920495/150‑1 (MQ=255) gCACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAATATCAAACATTTATCAATCAGTCCCCTAGct > 1:2809785/1‑150 (MQ=255) cACCTGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTTATTACGGACGGAAATATCAAACATTTATCAATCAGTCCCCTAGctc > 2:1833012/1‑150 (MQ=255) | TTTTTTTGATGTCTGGAAATCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGTGGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCCGTTTTTATTATGCTTTATTTACTCATTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACGGACGGAAATATCAAACATTTATCAATCAGTCCCCTAGCTCT > CP043523/533293‑533586 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |