| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP043523 | 1,867,563 | G→A | Q13Q (CAG→CAA) | FTN78_chr1914 → | Site‑specific recombinase, DNA invertase Pin related protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP043523 | 1,867,563 | 0 | G | A | 99.8% | 1482.6 / ‑5.1 | 438 | Q13Q (CAG→CAA) | FTN78_chr1914 | Site‑specific recombinase, DNA invertase Pin related protein |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (225/212); total (225/213) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01 | |||||||||||
Only 100 of 439 total aligned reads displayed.
GATAATAAAGAGCTCAAAACTTAACAGTTGTGAGCTCTTTTTTTGTGTGTTAAAATTAAAGGAGAAAGAACGGCTCGTAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAGAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAATTTACGGGGACTACAGTTGAACGTCCACAATTTAATTTAGTGCTCAAAAAGTTAACAAATGGCGATACTTTAATTGTGACAAA > CP043523/1867418‑1867709 | gtagcgtttttgcatgtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAAt > 1:1413903‑M1/79‑150 (MQ=255)gtagcgtttttgcatgtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAAt < 2:1125431‑M1/72‑1 (MQ=255) gtttttgcatgtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGaa < 2:1569295‑M1/77‑1 (MQ=255) tttttgcatgtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAAt > 1:1136258‑M1/73‑150 (MQ=255) ttttgcatgttttttttttttttttaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAAtc < 2:2476770‑M1/79‑1 (MQ=255) ttgcatgtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAAtctc > 1:3358357‑M1/70‑150 (MQ=255) gcatgtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCaa < 2:2006139‑M1/83‑1 (MQ=255) tgtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAAtt > 1:1710149‑M1/65‑150 (MQ=255) tgtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAAtt > 1:2820061‑M1/65‑150 (MQ=255) gtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTg < 2:3743522‑M1/87‑1 (MQ=255) ttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGaa < 1:4005758‑M1/89‑1 (MQ=255) ttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGaa < 2:926141‑M1/89‑1 (MQ=255) ttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTCGAACAAAAATTAGAATCTCAAATTGaa < 1:4067629‑M1/89‑1 (MQ=255) tttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAg > 1:551147‑M1/61‑150 (MQ=255) tgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGtt < 2:2846798‑M1/92‑1 (MQ=255) tcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCt > 1:678584‑M1/57‑150 (MQ=255) tcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCt > 2:444248‑M1/57‑150 (MQ=255) cctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTg < 2:3984939‑M1/95‑1 (MQ=255) cctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTg > 1:3268155‑M1/56‑150 (MQ=255) ctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGa > 2:3061026‑M1/55‑150 (MQ=255) ttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGaaa > 1:2078186‑M1/53‑150 (MQ=255) tgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAaag > 1:3754772‑M1/52‑150 (MQ=255) tgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAaag > 1:1786037‑M1/52‑150 (MQ=255) taaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAACTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGc < 2:2096898‑M1/103‑1 (MQ=255) aaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCa < 2:2277822‑M1/104‑1 (MQ=255) attatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAgg > 2:1675546‑M1/45‑150 (MQ=255) atacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGc > 2:3408535‑M1/42‑150 (MQ=255) atacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGc > 1:4491191‑M1/42‑150 (MQ=255) tacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCa > 1:4277308‑M1/41‑150 (MQ=255) tacaatagtgactctaagatttaaggataacatcactcacAAATTAGGGTTAATAATAGAGGTCAAAATATGAAAATTGGGAATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTATGAAAGAAGCAGGAGCa < 1:3002322‑M1/110‑1 (MQ=255) acaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGgagcaggagcag > 2:4044994‑M1/40‑150 (MQ=255) acaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCag > 1:876347‑M1/40‑150 (MQ=255) agtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAgaagaa < 2:463921‑M1/116‑1 (MQ=255) actctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGttt < 2:3157294‑M1/120‑1 (MQ=255) actctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGttt > 2:1094380‑M1/31‑150 (MQ=255) tctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTc > 2:1789016‑M1/29‑150 (MQ=255) tctaagatttaaggataacatcactcacAACTTAGCGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTc < 2:4266146‑M1/122‑1 (MQ=255) taagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCa < 1:962343‑M1/124‑1 (MQ=255) taagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCa < 1:2599491‑M1/124‑1 (MQ=255) aagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCaa < 2:1205598‑M1/125‑1 (MQ=255) gatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGa > 1:1013365‑M1/24‑150 (MQ=255) ttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGaaaa > 2:3607862‑M1/21‑150 (MQ=255) taaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAgaaaag > 2:38133‑M1/20‑149 (MQ=255) aggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCaagaaaagtt < 1:459613‑M1/133‑4 (MQ=255) aggataacatcactcacAACTTAGGGTTATAAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCGGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCaagaaaagtt < 2:1739872‑M1/133‑4 (MQ=255) ggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGttt < 2:618357‑M1/134‑1 (MQ=255) ataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTAc < 1:2377206‑M1/136‑1 (MQ=255) ataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTAc < 2:3346449‑M1/136‑1 (MQ=255) taacatcactcatAACTTAGTGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTact > 2:4519219‑M1/14‑149 (MQ=255) taacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTact > 1:1291816‑M1/14‑149 (MQ=255) atcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAgtttactggaa > 1:3657054‑M1/10‑145 (MQ=255) atcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAgtttactggaa > 1:3620906‑M1/10‑145 (MQ=255) tcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAagtttactggaac < 1:4566292‑M1/142‑7 (MQ=255) tcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAagtttactggaac < 2:2153985‑M1/142‑7 (MQ=255) tcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAagtttactggaac > 2:4013479‑M1/9‑144 (MQ=255) cactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAaagtttactggaact < 1:2678952‑M1/143‑8 (MQ=255) actcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTa > 2:877909‑M1/7‑150 (MQ=255) actcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTa < 1:4469799‑M1/144‑1 (MQ=255) ctcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTAc > 1:3035342‑M1/6‑150 (MQ=255) tcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACa > 1:3533666‑M1/5‑150 (MQ=255) acAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGt > 2:4303296‑M1/3‑150 (MQ=255) cAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAgtc < 2:2189582‑M1/149‑2 (MQ=255) cTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGaa < 1:752086/150‑1 (MQ=255) ttAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAAc < 2:1270109/150‑1 (MQ=255) ttAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAAc > 1:644183/1‑150 (MQ=255) ttAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTAAAAAAAAAAAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAAc < 2:3602912/150‑1 (MQ=255) aGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGt < 2:776605/150‑1 (MQ=255) gggTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTc > 1:2116338/1‑150 (MQ=255) ttattaATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCcac < 1:2554107/150‑1 (MQ=255) ttaATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCGAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACaat < 2:4144967/150‑1 (MQ=255) ttaATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACaat < 2:1891574/150‑1 (MQ=255) taATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACaatt > 2:2350467/1‑150 (MQ=255) aaTAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACaattt > 2:952297/1‑150 (MQ=255) aTAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACaattta < 1:4194941/150‑1 (MQ=255) tAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACaatttaa > 1:3846065/1‑150 (MQ=255) agagGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACaatttaat > 1:1122017/1‑150 (MQ=255) agagGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACaatttaat < 2:3012719/150‑1 (MQ=255) gagGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACaatttaatc > 1:4317667/1‑149 (MQ=255) ggTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACaatttaatct > 1:1924684/1‑147 (MQ=255) gTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAg > 2:2629089/1‑150 (MQ=255) gTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAg > 1:2413270/1‑150 (MQ=255) cAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGta < 1:1502583/150‑2 (MQ=255) aaaTATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGtatt < 1:949904/150‑4 (MQ=255) ttGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTaa > 2:1426319/1‑150 (MQ=255) ttGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTaa > 2:1327637/1‑150 (MQ=255) nggTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTaaag > 2:4118523/2‑148 (MQ=255) gggTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTaaag < 2:348165/150‑3 (MQ=255) gggTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTaaag > 1:1880645/1‑148 (MQ=255) cTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATtg > 1:701735/1‑150 (MQ=255) cTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATtg < 1:3984939/150‑1 (MQ=255) ttttGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAGGGATGGTGACACTTTAATtgt < 1:2911110/150‑1 (MQ=255) ttttGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATtgt < 2:3281322/150‑1 (MQ=255) tttGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATtgtn < 2:1078968/150‑2 (MQ=255) ttGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGa > 2:2197033/1‑150 (MQ=255) tGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACCACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGAc > 2:2604863/1‑150 (MQ=255) gAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACa < 1:1641137/150‑1 (MQ=255) gAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACa > 1:1580679/1‑150 (MQ=255) aaCAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACaa > 2:2416600/1‑150 (MQ=255) aaCAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACaa > 1:4119983/1‑150 (MQ=255) aCAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACaaa > 1:228019/1‑150 (MQ=255) | GATAATAAAGAGCTCAAAACTTAACAGTTGTGAGCTCTTTTTTTGTGTGTTAAAATTAAAGGAGAAAGAACGGCTCGTAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAGAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAATTTACGGGGACTACAGTTGAACGTCCACAATTTAATTTAGTGCTCAAAAAGTTAACAAATGGCGATACTTTAATTGTGACAAA > CP043523/1867418‑1867709 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |