Predicted mutation
evidence seq id position mutation annotation gene description
RA CP043523 1,867,995 G→A K157K (AAG→AAA)  FTN78_chr1914 → Site‑specific recombinase, DNA invertase Pin related protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0435231,867,9950GA100.0% 1221.1 / NA 363K157K (AAG→AAA) FTN78_chr1914Site‑specific recombinase, DNA invertase Pin related protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (181/182);  total (181/182)

Only 100 of 375 total aligned reads displayed.

CAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAACTTTGCTAAAATCCATGATCCGAACTTTAAAGAAGGACGTCCTCAGAAATTTACTGAAGAACAAATTCAATTTGCTTATGAATTAAAGCAGCAAGGTATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGACTCAAAAAAGAAGATTTATGAAGATCGCAAAAAATAAATCTATTGACAAAGACTATTGAAATGATATAATTAACATAACGAATGATTGTGGGAG  >  CP043523/1867848‑1868144
                                                                                                                                                   |                                                                                                                                                     
 aGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAaacag                                                                                                                                                    >  1:1099039/1‑150 (MQ=255)
     cTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAg                                                                                                                                                >  2:1332966/1‑150 (MQ=255)
     cTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAg                                                                                                                                                >  2:3038411/1‑150 (MQ=255)
      ttttGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAgg                                                                                                                                               >  2:4040048/1‑150 (MQ=255)
      ttttGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAgg                                                                                                                                               >  1:2111132/1‑150 (MQ=255)
       tttGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAgga                                                                                                                                              <  1:3515984/150‑2 (MQ=255)
        ttGCGCAGTTTGAACGAGACCTTCTTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAggaa                                                                                                                                             <  1:4439361/150‑3 (MQ=255)
        ttGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAggaa                                                                                                                                             >  1:3142432/1‑148 (MQ=255)
           cgcAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATgn                                                                                                                                          <  1:487597/150‑2 (MQ=255)
            gcAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGAc                                                                                                                                         <  1:2199390/150‑1 (MQ=255)
             cAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGACGAACAAATTCAATTTGCTTGTGAGTTACAAAAGCAAGGAATGACt                                                                                                                                        >  2:161727/1‑150 (MQ=255)
               gTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTa                                                                                                                                      <  2:1274636/150‑1 (MQ=255)
                   gAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAg                                                                                                                                  >  1:4383023/1‑150 (MQ=255)
                   gAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAg                                                                                                                                  >  1:3827744/1‑150 (MQ=255)
                    aaCGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAga                                                                                                                                 >  1:2052416/1‑150 (MQ=255)
                     aCGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAgat                                                                                                                                >  1:3694986/1‑150 (MQ=255)
                      cGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAgatg                                                                                                                               >  2:2559285/1‑150 (MQ=255)
                      cGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAgatg                                                                                                                               <  1:3639276/150‑1 (MQ=255)
                       gagaCCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAgatga                                                                                                                              >  2:1513094/1‑150 (MQ=255)
                        agaCCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAgatgat                                                                                                                             >  2:3731268/1‑150 (MQ=255)
                        agaCCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAgatgat                                                                                                                             <  1:3230533/150‑1 (MQ=255)
                        agaCCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAgatgat                                                                                                                             <  1:4331185/150‑1 (MQ=255)
                         gaCCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGAtt                                                                                                                            <  2:198695/150‑1 (MQ=255)
                          aCCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTg                                                                                                                           <  2:355176/150‑1 (MQ=255)
                            cTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAg                                                                                                                         <  2:3077245/150‑1 (MQ=255)
                               aTTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGa                                                                                                                      <  1:4201917/150‑1 (MQ=255)
                                ttGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGaa                                                                                                                     <  2:1852170/150‑1 (MQ=255)
                                 tGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGaaa                                                                                                                    <  1:586505/150‑1 (MQ=255)
                                   tAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGaaaaa                                                                                                                  >  1:1901728/1‑150 (MQ=255)
                                    aaCCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAAc                                                                                                                 <  1:2282934/150‑1 (MQ=255)
                                     aCCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACt                                                                                                                >  1:3015127/1‑150 (MQ=255)
                                     aCCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACt                                                                                                                >  1:4065487/1‑150 (MQ=255)
                                      ccAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTg                                                                                                               <  1:2855171/150‑1 (MQ=255)
                                       cAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTgg                                                                                                              <  1:1443925/150‑1 (MQ=255)
                                       cAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTgg                                                                                                              >  1:2064632/1‑150 (MQ=255)
                                        aGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGt                                                                                                             <  1:2923339/150‑1 (MQ=255)
                                        aGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGt                                                                                                             >  1:1493398/1‑150 (MQ=255)
                                          gACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTAt                                                                                                           >  1:2369001/1‑150 (MQ=255)
                                           aCTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATc                                                                                                          >  1:2734654/1‑150 (MQ=255)
                                            cTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCa                                                                                                         <  2:2666512/150‑1 (MQ=255)
                                            cTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCa                                                                                                         >  2:4313939/1‑150 (MQ=255)
                                            cTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGGATCa                                                                                                         >  1:1203633/1‑150 (MQ=255)
                                               aggaaggaAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTa                                                                                                      >  2:2171761/1‑150 (MQ=255)
                                                ggaaggaaAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTAt                                                                                                     >  2:1124200/1‑150 (MQ=255)
                                                ggaaggaaAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTAt                                                                                                     <  2:4565631/150‑1 (MQ=255)
                                                 gaaggaaAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATAGAGCGAAAAACTGGTATCAGTAtt                                                                                                    <  2:1619709/150‑1 (MQ=255)
                                                  aaggaaAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTg                                                                                                   >  1:3510856/1‑150 (MQ=255)
                                                   aggaaAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGc                                                                                                  <  1:1984733/150‑1 (MQ=255)
                                                    ggaaAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCg                                                                                                 >  1:2506944/1‑150 (MQ=255)
                                                     gaaAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCgg                                                                                                >  2:2469106/1‑149 (MQ=255)
                                                     gaaAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCgg                                                                                                <  1:2607073/150‑2 (MQ=255)
                                                      aaaaaaTTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCggc                                                                                               >  1:1012662/1‑148 (MQ=255)
                                                      aaaaaaTTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCggc                                                                                               >  2:874758/1‑148 (MQ=255)
                                                      aaaaaaTTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCggc                                                                                               <  1:3303746/150‑3 (MQ=255)
                                                            ttttGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCaaaa                                                                                         <  2:1844011/149‑1 (MQ=255)
                                                              ttGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCaaaaac                                                                                       <  2:3428779/150‑2 (MQ=255)
                                                                   aagcttcATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAAcgaaga                                                                                  >  2:450607/7‑150 (MQ=255)
                                                                    agcttcATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGAt                                                                                 <  2:3271551/145‑1 (MQ=255)
                                                                     gcttcATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGAtt                                                                                >  2:331514/5‑150 (MQ=255)
                                                                     gcttcATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGAtt                                                                                <  2:4344800/146‑1 (MQ=255)
                                                                       ttcATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATAATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTa                                                                              <  2:3665066/148‑1 (MQ=255)
                                                                         cATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAta                                                                            <  2:1187211/150‑2 (MQ=255)
                                                                                                   nccTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACaa                                               >  2:2218829/2‑150 (MQ=255)
                                                                                                    ccTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACaaa                                              >  2:603725/1‑150 (MQ=255)
                                                                                                      tcaaaaaTTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGa                                            <  2:569432/146‑1 (MQ=255)
                                                                                                       caaaaaTTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAGCTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGAc                                           <  2:3620262/147‑1 (MQ=255)
                                                                                                        aaaaaTTTACAGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATATAAAAAAA‑‑‑AAAAAAATCAAGCTATTGACAAAGACt                                          <  2:1023880/148‑1 (MQ=17)
                                                                                                         aaaaTTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTa                                         >  1:1681948/2‑150 (MQ=255)
                                                                                                         aaaaTTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTa                                         <  2:1725849/149‑1 (MQ=255)
                                                                                                          aaaTTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTAt                                        <  1:77941/150‑1 (MQ=255)
                                                                                                           aaTTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTATAAA‑A‑‑GCAAAAAATCAAGCTATTGACAAAGACTAtt                                       >  2:2497552/1‑150 (MQ=255)
                                                                                                            aTTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTg                                      <  2:284379/150‑1 (MQ=255)
                                                                                                            aTTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTg                                      >  2:3902103/1‑150 (MQ=255)
                                                                                                            aTTTACCGAAGAACAAATTCAAGTTGGTTATGAGTTAAAACAGCACGGAGTGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAGCGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTg                                      <  2:1783133/150‑1 (MQ=255)
                                                                                                               tACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTATAAA‑A‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGaaa                                   >  2:2756384/1‑150 (MQ=255)
                                                                                                               tACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGaaa                                   >  2:2891503/1‑150 (MQ=255)
                                                                                                                accgaagaaCAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTAGAAGATGATTGAGCGAAAAGCTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAAt                                  >  2:4057612/4‑150 (MQ=255)
                                                                                                                 ccgaagaaCAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATg                                 >  2:2329258/3‑150 (MQ=255)
                                                                                                                   gnagaaCAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATgtt                               >  1:1603049/1‑148 (MQ=255)
                                                                                                                   gaagaaCAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATgtt                               <  1:2310678/150‑3 (MQ=255)
                                                                                                                   gaagaaCAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATgtt                               <  2:2111132/150‑3 (MQ=255)
                                                                                                                    aagaaCAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATgtta                              >  1:2798818/1‑147 (MQ=255)
                                                                                                                    aagaaCAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGtta                              >  2:3861649/1‑150 (MQ=255)
                                                                                                                     agaaCAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGttat                             >  2:1398691/1‑150 (MQ=255)
                                                                                                                     agaaCAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGttat                             <  1:2424585/150‑1 (MQ=255)
                                                                                                                      gaaCAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTtata                            >  2:1900450/1‑150 (MQ=255)
                                                                                                                         cAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAAtt                         >  1:3989402/1‑150 (MQ=255)
                                                                                                                         cAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAAtt                         <  1:694222/150‑1 (MQ=255)
                                                                                                                         cAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAAtt                         <  1:1333796/150‑1 (MQ=255)
                                                                                                                          aaaTTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAAttt                        >  2:3749673/1‑149 (MQ=255)
                                                                                                                           aaTTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAAttta                       >  2:749576/1‑148 (MQ=255)
                                                                                                                            aTTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAAtttag                      >  1:1828140/1‑147 (MQ=255)
                                                                                                                            aTTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAAtttag                      >  2:3922448/1‑147 (MQ=255)
                                                                                                                            aTTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAAtttag                      >  1:3156138/1‑147 (MQ=255)
                                                                                                                             ttCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAAtttagt                     <  1:2955113/150‑5 (MQ=255)
                                                                                                                               cAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTATAAA‑A‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAAtttagtta                   >  2:506111/1‑144 (MQ=255)
                                                                                                                                aaTTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAAtttagttaa                  >  1:1304137/1‑143 (MQ=255)
                                                                                                                                     gCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAATTTAGTTAACGaag             >  2:1311239/1‑149 (MQ=255)
                                                                                                                                      cTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAATTTAGTTAACGaaga            >  1:850713/1‑148 (MQ=255)
                                                                                                                                                aaaaCAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAATTTAGTTAACGAAGATTTGTGGGAg  >  2:664610/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
CAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAACTTTGCTAAAATCCATGATCCGAACTTTAAAGAAGGACGTCCTCAGAAATTTACTGAAGAACAAATTCAATTTGCTTATGAATTAAAGCAGCAAGGTATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGACTCAAAAAAGAAGATTTATGAAGATCGCAAAAAATAAATCTATTGACAAAGACTATTGAAATGATATAATTAACATAACGAATGATTGTGGGAG  >  CP043523/1867848‑1868144

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑