Predicted mutation
evidence seq id position mutation annotation gene description
RA CP043523 1,868,004 T→A G160G (GGT→GGA)  FTN78_chr1914 → Site‑specific recombinase, DNA invertase Pin related protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0435231,868,0040TA100.0% 1251.7 / NA 375G160G (GGT→GGA) FTN78_chr1914Site‑specific recombinase, DNA invertase Pin related protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (187/188);  total (187/188)

Only 100 of 375 total aligned reads displayed.

TGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAACTTTGCTAAAATCCATGATCCGAACTTTAAAGAAGGACGTCCTCAGAAATTTACTGAAGAACAAATTCAATTTGCTTATGAATTAAAGCAGCAAGGTATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGACTCAAAAAAGAAGATTTATGAAGATCGCAAAAAATAAATCTATTGACAAAGACTATTGAAATGATATAATTAACATAACGAATGA‑TTGTGGGAGTATTATCTC  >  CP043523/1867857‑1868153
                                                                                                                                                   |                                                                                                                                                      
 gcgcAGTTTGCACGGGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAGGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATg                                                                                                                                                     <  1:2156673/150‑1 (MQ=255)
 gcgcAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATg                                                                                                                                                     >  2:3397844/1‑150 (MQ=255)
   gcAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGAc                                                                                                                                                   <  1:2201174/150‑1 (MQ=255)
     aGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACtt                                                                                                                                                 >  2:2527076/1‑150 (MQ=255)
       tttGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTAc                                                                                                                                               >  1:2042672/1‑150 (MQ=255)
       tttGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTAc                                                                                                                                               >  1:737908/1‑150 (MQ=255)
         tGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACaa                                                                                                                                             <  1:848952/150‑1 (MQ=255)
          gAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAg                                                                                                                                            >  1:4383023/1‑150 (MQ=255)
           aaCGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAga                                                                                                                                           >  1:1311986/1‑150 (MQ=255)
             cGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAgatg                                                                                                                                         >  2:1757652/1‑150 (MQ=255)
             cGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAgatg                                                                                                                                         <  2:3712857/150‑1 (MQ=255)
              gagaCCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAgatga                                                                                                                                        >  1:3388790/1‑150 (MQ=255)
               agggcTTATTGTGAGCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCACAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAgatgag                                                                                                                                       <  2:1491997/146‑2 (MQ=255)
               agaCCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAgatgat                                                                                                                                       <  1:3230533/150‑1 (MQ=255)
                gaCCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGAtt                                                                                                                                      <  2:2201949/150‑1 (MQ=255)
                gaCCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGAtt                                                                                                                                      <  2:2354797/150‑1 (MQ=255)
                   cTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAg                                                                                                                                   <  1:2418841/150‑1 (MQ=255)
                    ttATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGc                                                                                                                                  <  1:503918/150‑1 (MQ=255)
                     tATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCg                                                                                                                                 <  1:1513094/150‑1 (MQ=255)
                     tATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCg                                                                                                                                 <  1:604954/150‑1 (MQ=255)
                     tATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCg                                                                                                                                 <  1:3003279/150‑1 (MQ=255)
                      aTTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGa                                                                                                                                >  1:3107329/1‑150 (MQ=255)
                        tGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGaaa                                                                                                                              <  1:2317165/150‑1 (MQ=255)
                          tAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGaaaaa                                                                                                                            >  1:1901728/1‑150 (MQ=255)
                          tAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGaaaaa                                                                                                                            >  1:3668199/1‑150 (MQ=255)
                           aaCCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAAc                                                                                                                           <  1:2282934/150‑1 (MQ=255)
                            aCCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACt                                                                                                                          >  1:4065487/1‑150 (MQ=255)
                              cAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTgg                                                                                                                        >  1:2071611/1‑150 (MQ=255)
                               aGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGt                                                                                                                       >  2:426800/1‑150 (MQ=255)
                                 gACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTAt                                                                                                                     >  2:1946830/1‑150 (MQ=255)
                                  aCTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATc                                                                                                                    >  1:2734654/1‑150 (MQ=255)
                                   cTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCa                                                                                                                   <  2:2666512/150‑1 (MQ=255)
                                    tCAGGAAGCAAAAAATTTTGCTAAGCTTCATAATCCAAGTTTTAAGGAACGGCGTCCTCAAAAATTTACCCAAGAACAATTTCAATTTGCTTATGAGTTAATATAGCAAGGAATGATTTACAAGATGATTGAGCGAAAAGCTGGTATCAg                                                                                                                  <  2:4366510/150‑1 (MQ=255)
                                      aggaaggaAAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATCATTGAGCGAAAAACTGGTATCAGTa                                                                                                                <  2:573004/150‑1 (MQ=255)
                                       ggaaggaaAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTAt                                                                                                               <  2:1615048/150‑1 (MQ=255)
                                        gaaggaaAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATAGAGCGAAAAACTGGTATCAGTAtt                                                                                                              <  2:1619709/150‑1 (MQ=255)
                                         aaggaaAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTg                                                                                                             >  1:3510856/1‑150 (MQ=255)
                                          aggaaAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTTAGCGAAAAACTGGTATCAGTATTGc                                                                                                            <  2:3797028/150‑1 (MQ=255)
                                          aggaaAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGc                                                                                                            >  2:527064/1‑150 (MQ=255)
                                          aggaaAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGc                                                                                                            <  1:1984733/150‑1 (MQ=255)
                                           ggaaAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCg                                                                                                           >  1:2506944/1‑150 (MQ=255)
                                            gaaAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCgg                                                                                                          >  2:2469106/1‑149 (MQ=255)
                                            gaaAAAATTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCgg                                                                                                          <  1:2607073/150‑2 (MQ=255)
                                             aaaaaaTTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCggc                                                                                                         >  1:1012662/1‑148 (MQ=255)
                                              aaaaaTTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCt                                                                                                        >  2:3744315/1‑150 (MQ=255)
                                              aaaaaTTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATAGAGCGAAAAACTGGTATCAGTATTGCGGCt                                                                                                        <  2:2274196/150‑1 (MQ=255)
                                               aaaaTTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTc                                                                                                       <  2:1236814/150‑1 (MQ=255)
                                               aaaaTTTTGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTc                                                                                                       <  2:639493/150‑1 (MQ=255)
                                                 aattttGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCaa                                                                                                     <  2:3433720/147‑1 (MQ=255)
                                                 aattttGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCaa                                                                                                     <  1:1459826/147‑1 (MQ=255)
                                                  attttGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCaaa                                                                                                    >  2:4060827/3‑150 (MQ=255)
                                                   ttttGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCaaaa                                                                                                   >  1:2891038/2‑150 (MQ=255)
                                                   ttttGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCaaaa                                                                                                   <  2:1844011/149‑1 (MQ=255)
                                                    tttGCTAAGCTTCATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCaaaaa                                                                                                  <  2:475976/150‑1 (MQ=255)
                                                         taagcttcATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAacgaag                                                                                             <  1:1433899/143‑1 (MQ=255)
                                                         taagcttcATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAacgaag                                                                                             >  2:1854494/8‑150 (MQ=255)
                                                          aagcttcATGATCCAAGTTTTAAGGAAGGGCGTCCTCAAAAATTTACCGAAGAACAAATTCAATTTGGTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAAcgaaga                                                                                            <  2:2160288/144‑1 (MQ=255)
                                                            gcttcATGATCCAAGTTTTAAGGAAGGGCGTCCTGAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGAtg                                                                                          >  2:329524/5‑149 (MQ=255)
                                                                                           ccTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACaaa                                                        >  1:4272810/1‑150 (MQ=255)
                                                                                            cTCAAAAATTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAg                                                       >  2:1281953/1‑150 (MQ=255)
                                                                                              caaaaaTTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAGCTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGAc                                                     <  2:3620262/147‑1 (MQ=255)
                                                                                               aaaaaTTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACt                                                    <  2:687001/148‑1 (MQ=255)
                                                                                               aaaaaTTTACAGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATATAAAAAAA‑‑‑AAAAAAATCAAGCTATTGACAAAGACt                                                    <  2:1023880/148‑1 (MQ=17)
                                                                                                aaaaTTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTa                                                   >  1:1681948/2‑150 (MQ=255)
                                                                                                aaaaTTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTa                                                   <  2:1725849/149‑1 (MQ=255)
                                                                                                 aaaTTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTATAAA‑A‑‑GCAAAAAATCAAGCTATTGACAAAGACTAt                                                  <  1:78628/150‑1 (MQ=255)
                                                                                                   aTTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAACAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTATAAA‑A‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTg                                                >  2:3901764/1‑150 (MQ=255)
                                                                                                   aTTTACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTg                                                <  2:286315/150‑1 (MQ=255)
                                                                                                    tttACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GAAAAAAATCAAGCTATTGACAAAGACTATTGa                                               <  2:1311986/150‑1 (MQ=255)
                                                                                                     ttACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGaa                                              <  2:882729/150‑1 (MQ=255)
                                                                                                      tACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGaaa                                             <  1:1154989/150‑1 (MQ=255)
                                                                                                      tACCGAAGAACAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGaaa                                             >  2:2891503/1‑150 (MQ=255)
                                                                                                       accgaagaaCAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAAt                                            <  2:4045747/147‑1 (MQ=255)
                                                                                                        ccgaagaaCAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGTCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATg                                           <  2:4531499/148‑1 (MQ=255)
                                                                                                          gnagaaCAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATgtt                                         >  1:1603049/1‑148 (MQ=255)
                                                                                                          gaagaaCAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATgtt                                         >  2:3061557/1‑148 (MQ=255)
                                                                                                           aagaaCAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATgtta                                        >  1:2798818/1‑147 (MQ=255)
                                                                                                            agaaCAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGttat                                       >  2:1398691/1‑150 (MQ=255)
                                                                                                             gaaCAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTtata                                      >  2:1900450/1‑150 (MQ=255)
                                                                                                                cAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAAtt                                   >  1:3989402/1‑150 (MQ=255)
                                                                                                                cAAATTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAAtt                                   <  2:756307/150‑1 (MQ=255)
                                                                                                                 aaaTTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAAttt                                  >  1:1233573/1‑149 (MQ=255)
                                                                                                                   aTTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAAtttag                                >  2:3918483/1‑147 (MQ=255)
                                                                                                                   aTTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAAtttag                                >  1:1828140/1‑147 (MQ=255)
                                                                                                                   aTTCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACAAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAAtttag                                <  1:3764591/150‑4 (MQ=255)
                                                                                                                    ttCAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAAtttagt                               <  1:2953860/150‑5 (MQ=255)
                                                                                                                      cAATTTGCTTATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAAtttagtta                             <  1:4145431/150‑7 (MQ=255)
                                                                                                                              ttATGAGTTAAAACAGCAAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAATTTAGTTAACGaagat                     >  2:3552592/1‑147 (MQ=255)
                                                                                                                                       aaaacagcaAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAATTTAGTTAACGAA‑GATTTGTGGGAg           <  2:2725092/146‑1 (MQ=255)
                                                                                                                                        aaacagcaAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAATTTAGTTAACGAAGAT‑TTGTGGGAGt          >  2:1098152/4‑150 (MQ=255)
                                                                                                                                        aaacagcaAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAATTTAGTTAACGAA‑GATTTGTGGGAGt          >  1:4427616/4‑150 (MQ=255)
                                                                                                                                         aacagcaAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAATTTAGTTAACGAA‑GATTTGTGGGAGtg         <  1:3731268/148‑2 (MQ=255)
                                                                                                                                          acagcaAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAATTTAGTTAACGAA‑GATTTGTGGGAGtgg        <  2:2052416/149‑3 (MQ=255)
                                                                                                                                           cagcaAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAATTTAGTTAACGAA‑GATTTGTGGGAGtggt       <  2:3098520/150‑4 (MQ=255)
                                                                                                                                            agaaaGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTATAAA‑A‑‑GAAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAATTTAGTTAACGAA‑GATTTGTGGGAGtggta      <  2:2635994/147‑5 (MQ=255)
                                                                                                                                             gcaAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAATTTAGTTAACGAA‑GATTTGTGGGAGtggtat     >  1:328007/1‑145 (MQ=255)
                                                                                                                                             gcaAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAATTTAGTTAACGAA‑GATTTGTGGGAGtggtat     >  2:1149849/1‑145 (MQ=255)
                                                                                                                                              caAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAATTTAGTTAACGAA‑GATTTGTGGGAGtggtatc    >  1:1778380/1‑144 (MQ=255)
                                                                                                                                              caAGGAATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGATTTAT‑AAAA‑‑GCAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAATTTAGTTAACGAA‑GATTTGTGGGAGtggtatc    <  2:3189204/150‑7 (MQ=255)
                                                                                                                                               aaGGAATGAATTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGGCTCAAAAACGAAGA‑‑TATAAA‑AAAGAAAAAAATCAAGCTATTGACAAAGACTATTGAAATGTTATAATTTAGTTAACGAA‑GATTTGTGGGAGtggtatct   <  2:3656119/150‑8 (MQ=255)
                                                                                                                                                   |                                                                                                                                                      
TGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAACTTTGCTAAAATCCATGATCCGAACTTTAAAGAAGGACGTCCTCAGAAATTTACTGAAGAACAAATTCAATTTGCTTATGAATTAAAGCAGCAAGGTATGACTTACAAGATGATTGAGCGAAAAACTGGTATCAGTATTGCGACTCAAAAAAGAAGATTTATGAAGATCGCAAAAAATAAATCTATTGACAAAGACTATTGAAATGATATAATTAACATAACGAATGA‑TTGTGGGAGTATTATCTC  >  CP043523/1867857‑1868153

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑