| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP043523 | 1,882,627 | G→T | intergenic (+338/‑217) | FTN78_chr1926 → / → FTN78_chr1927 | hypothetical protein/3‑ketoacyl‑CoA thiolase, Acetyl‑CoA acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP043523 | 1,882,627 | 0 | G | T | 100.0% | 1496.0 / NA | 681 | intergenic (+338/‑217) | FTN78_chr1926/FTN78_chr1927 | hypothetical protein/3‑ketoacyl‑CoA thiolase, Acetyl‑CoA acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (416/265); total (416/265) | |||||||||||
Only 100 of 681 total aligned reads displayed.
ATCGTGGTTGAGGCAGTACGTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCTATTAGATTGTTAAGGTATTTCACGGTTCGATGCTCTGTCTTAGTATATAATTCATTACTCTGTAATTTTCTAAAGGCAGAGCCAATAGACGGAGCTTTATCCGTGACAATTACTCTAGGTTCAACAAACTGCTTATGTAGTCGTTTCAAGAATGCATAAGCCGCTTGAGTATCCCGTTTCTTTCGTAACCAGATATCTAAAGTCAATCCAAACT > CP043523/1882481‑1882766 | ttGAGGCAGTTCGTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCaa < 2:3566389/150‑1 (MQ=17) gCAGTTCGTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGag < 2:3697825/150‑2 (MQ=12) gttcGTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAgggc < 2:1252974/147‑2 (MQ=17) gttcGTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGagggc > 1:2294626/4‑146 (MQ=12) cGTAGACTTCGATAAAATTTACTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTAATTGAGATACTTCGCGGTTCGATGCTCTGACTTAGTATATAAACCGTAACTCTGTAACTTTCTAAATGCAGAACCAATAGagggcgat > 2:4430595/1‑143 (MQ=255) gTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCtt > 1:1546313/1‑150 (MQ=12) aGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTa > 2:2041675/1‑150 (MQ=17) aCTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATc > 2:1810372/1‑150 (MQ=12) cTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATcc < 2:1932371/150‑1 (MQ=12) ttCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCg < 2:531907/150‑1 (MQ=12) cGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTg > 2:4026723/1‑150 (MQ=12) aTAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGAc < 2:2137585/150‑1 (MQ=12) aaaaTTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACaa > 1:3877485/1‑150 (MQ=12) aaTTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAAtt > 2:1673909/1‑150 (MQ=17) aTTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTa > 2:2091003/1‑150 (MQ=17) tATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTActc < 1:3315838/150‑1 (MQ=12) aTTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTActct > 2:571995/1‑150 (MQ=16) aTTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTActct < 1:733240/150‑1 (MQ=16) aTTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTActct > 1:2501587/1‑150 (MQ=16) ttGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTActctt > 2:804588/1‑149 (MQ=12) ttGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTActctt > 1:3197445/1‑149 (MQ=16) tGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTActcttg < 2:239804/150‑3 (MQ=12) cgtcgtTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGt > 2:2819021/1‑150 (MQ=12) gtcgtTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGtt > 2:937403/1‑150 (MQ=12) gtcgtTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGtt < 2:376707/150‑1 (MQ=16) tcgtTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGttg > 2:3852303/1‑149 (MQ=12) ntttGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGGTGCTCTGTCTTAGTATATAAACCGTTACTCTGTAGCTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGttgac > 2:2503485/2‑147 (MQ=12) gtTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGttgac < 2:1332305/150‑4 (MQ=16) gtTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGttgac < 1:4600922/150‑4 (MQ=12) gtTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGttgac > 1:3822622/1‑147 (MQ=12) gtTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGttgac > 1:1649026/1‑147 (MQ=12) gtTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGttgac > 1:1766866/1‑147 (MQ=12) ttGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGttgacca > 2:86439/1‑145 (MQ=12) tGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGttgaccaa > 2:611834/1‑144 (MQ=12) aTTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCGGTGACAATTACTCTTGGTTGACCAAAc > 1:4062693/1‑150 (MQ=9) ttGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACt > 1:612028/1‑150 (MQ=12) ggTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTgt > 1:3669413/1‑149 (MQ=12) gTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTgtt < 2:316668/150‑3 (MQ=12) cGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTa < 2:336681/150‑1 (MQ=12) cGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTa > 2:422226/1‑150 (MQ=9) gATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTAt > 1:203361/1‑150 (MQ=9) aTGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATg > 2:1638674/1‑150 (MQ=9) aTGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATg > 2:2210521/1‑150 (MQ=9) tGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGt < 1:3093637/150‑1 (MQ=9) gTCTTGCTCAATGAGGTTATTGAGCTACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAg > 2:319927/1‑150 (MQ=12) gagatacttCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGc < 2:2904819/143‑1 (MQ=14) agatacttCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGca < 1:2937971/144‑2 (MQ=12) gatacttCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGcag > 2:4456114/6‑148 (MQ=12) atacttCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAagcagc < 2:2714491/146‑1 (MQ=9) atacttCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGcagc > 1:4499243/5‑147 (MQ=12) acttcgcGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCtt < 1:3389507/144‑1 (MQ=12) acttCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCtt < 1:3564206/148‑1 (MQ=12) cttCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCGTAAGCAGCTTg > 1:3934989/2‑150 (MQ=12) cttCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTg > 1:4169471/2‑150 (MQ=17) ttCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGa > 1:892785/1‑150 (MQ=12) ttCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGa < 2:1989940/150‑1 (MQ=16) cACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGt > 2:3621762/1‑150 (MQ=16) cGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTAt > 2:4162354/1‑150 (MQ=17) cGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTAt < 2:2260524/150‑1 (MQ=17) cGGTTCGATGCTCTGTCTGAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATCACTCCTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTAt < 2:3102518/150‑1 (MQ=255) ggTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTCTCTGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATc > 2:115532/1‑150 (MQ=17) ggTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATc < 1:4271663/150‑1 (MQ=12) gTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATcc < 1:2555602/150‑1 (MQ=16) gATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtt < 2:3455785/150‑1 (MQ=12) gCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtttct > 2:3005657/1‑150 (MQ=9) ctctGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtttctt < 1:1203878/150‑1 (MQ=12) tctGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtttcttg > 1:4126909/1‑149 (MQ=14) tctGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtttcttg > 1:1000590/1‑149 (MQ=12) tGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtttcttgcg > 2:1480341/1‑147 (MQ=255) tGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCg < 1:445026/150‑1 (MQ=12) tCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTa < 1:813718/150‑1 (MQ=255) cTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAAGAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTGGACCAAACTGTTTATGTAGCCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTag > 2:1063409/1‑149 (MQ=255) cTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTag > 1:2216787/1‑149 (MQ=12) taaaccgttACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACCATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTc < 2:173472/143‑1 (MQ=255) taaaccgttACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTc > 1:1904498/8‑150 (MQ=255) aaaccgttACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCt < 2:703384/144‑1 (MQ=12) aaccgttACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTa < 2:3242799/145‑1 (MQ=255) aaccgttACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTa > 1:527781/6‑150 (MQ=12) ccgttACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTaaa < 1:168184/147‑1 (MQ=12) cgttACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAg > 2:129495/3‑150 (MQ=255) cgttACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAg > 2:4331750/3‑150 (MQ=255) gttACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGt < 1:2144114/149‑1 (MQ=255) gttACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGt < 2:2616788/149‑1 (MQ=255) gttACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGt > 1:2752462/2‑150 (MQ=12) ttACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTc > 1:2847405/1‑150 (MQ=255) ctctGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAAt > 2:1107937/1‑150 (MQ=255) tctGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATc < 1:1330375/150‑1 (MQ=255) tctGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATc > 1:2594732/1‑150 (MQ=255) ctGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATcc > 2:4572994/1‑150 (MQ=255) tGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCa < 2:39126/150‑1 (MQ=255) tGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCa < 1:3143692/150‑1 (MQ=16) tGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCa > 2:4052897/1‑150 (MQ=12) gTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCat > 1:3270370/1‑149 (MQ=16) aactttCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatcc > 2:2767376/4‑147 (MQ=255) aactttCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatcc > 1:1258693/4‑147 (MQ=16) actttCTAAATGTAGAACCAATAGTGGGCACTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatccg < 2:4539921/148‑5 (MQ=255) actttCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatccg > 2:3809385/3‑146 (MQ=255) actttCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatccg > 1:3520213/3‑146 (MQ=255) actttCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatccg < 2:3948886/148‑5 (MQ=16) actttCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatccg < 1:1072313/148‑5 (MQ=16) | ATCGTGGTTGAGGCAGTACGTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCTATTAGATTGTTAAGGTATTTCACGGTTCGATGCTCTGTCTTAGTATATAATTCATTACTCTGTAATTTTCTAAAGGCAGAGCCAATAGACGGAGCTTTATCCGTGACAATTACTCTAGGTTCAACAAACTGCTTATGTAGTCGTTTCAAGAATGCATAAGCCGCTTGAGTATCCCGTTTCTTTCGTAACCAGATATCTAAAGTCAATCCAAACT > CP043523/1882481‑1882766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |