| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP043523 | 1,882,633 | G→A | intergenic (+344/‑211) | FTN78_chr1926 → / → FTN78_chr1927 | hypothetical protein/3‑ketoacyl‑CoA thiolase, Acetyl‑CoA acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP043523 | 1,882,633 | 0 | G | A | 99.9% | 1453.0 / NA | 671 | intergenic (+344/‑211) | FTN78_chr1926/FTN78_chr1927 | hypothetical protein/3‑ketoacyl‑CoA thiolase, Acetyl‑CoA acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (410/260); minor base T (0/1); total (410/261) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 671 total aligned reads displayed.
GGTTGAGGCAGTACGTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCTATTAGATTGTTAAGGTATTTCACGGTTCGATGCTCTGTCTTAGTATATAATTCATTACTCTGTAATTTTCTAAAGGCAGAGCCAATAGACGGAGCTTTATCCGTGACAATTACTCTAGGTTCAACAAACTGCTTATGTAGTCGTTTCAAGAATGCATAAGCCGCTTGAGTATCCCGTTTCTTTCGTAACCAGATATCTAAAGTCAATCCAAACT > CP043523/1882486‑1882766 | ttGAGGCAGTTCGTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCaa < 2:3566389/150‑1 (MQ=17) tGAGGCAGTTCGTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAAt < 2:2000802/150‑1 (MQ=12) gCAGTTCGTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGag < 2:2043249/150‑2 (MQ=12) gCAGTTCGTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGag < 2:3697825/150‑2 (MQ=12) cAGTTCGTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGagg > 2:3486009/1‑148 (MQ=12) cAGTTCGTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGagg > 2:3038337/1‑148 (MQ=17) ttcGTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGagggcg > 2:1381340/3‑145 (MQ=12) tcGTAGACTTCGATAAAATTTATTGCGTCTTTTGCTTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTGCTCTGTAACTTTCTAAATGCAGAACCAATAGagggcga < 2:4510188/149‑7 (MQ=12) tcGTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGgcgc > 2:3169332/2‑150 (MQ=17) gTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAgggcgatt > 2:1072313/1‑145 (MQ=12) ttCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCg < 2:531907/150‑1 (MQ=12) tCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGt > 1:367297/1‑150 (MQ=12) cGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTg > 2:125814/1‑150 (MQ=12) gATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGa < 2:1298329/150‑1 (MQ=12) aTAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGAc > 2:1811484/1‑150 (MQ=12) tAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACa < 2:2115025/150‑1 (MQ=12) aaaaTTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACaa > 2:2717869/1‑150 (MQ=12) aaaaTTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACaa > 2:567399/1‑150 (MQ=12) aaaTTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAAt > 2:2429317/1‑150 (MQ=12) aaTTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAAtt > 2:1673909/1‑150 (MQ=17) aTTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTa > 1:2628250/1‑150 (MQ=12) aTTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTa > 2:1180836/1‑150 (MQ=12) tATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTActc < 1:3315838/150‑1 (MQ=12) aTTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTActct > 1:2501587/1‑150 (MQ=16) ttGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTActctt > 2:3772163/1‑149 (MQ=16) ttGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTActctt > 2:804588/1‑149 (MQ=12) ttGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTActctt > 1:3197445/1‑149 (MQ=16) gtcgtTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGtt > 2:937403/1‑150 (MQ=12) tcgtTTGATTGGTGGTTGGTCTTGCTCCATGAGTATGTTGAGATATCTCGCGGTTCGATGCTCTGTCTTAGTAGATAAGCCGTTACTCTGGTACTTTTTAAATGCAGATCCGATAGAGGGCGATTTATCCGTGACGATTACTCTTGGttg < 2:2263743/150‑2 (MQ=255) tcgtTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGttg > 2:3852303/1‑149 (MQ=12) ntttGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGGTGCTCTGTCTTAGTATATAAACCGTTACTCTGTAGCTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGttgac > 2:2503485/2‑147 (MQ=12) gtTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGttgac < 1:4600922/150‑4 (MQ=12) gtTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGttgac > 1:1649026/1‑147 (MQ=12) ttGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGttgacca > 2:86439/1‑145 (MQ=12) tGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGttgaccaa > 2:611834/1‑144 (MQ=12) aTTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAAc > 1:2057815/1‑150 (MQ=12) ttGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACt > 1:612028/1‑150 (MQ=12) cGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTa > 2:747104/1‑150 (MQ=9) aTGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATg < 2:1943441/150‑1 (MQ=9) tGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATgg > 1:3888831/1‑149 (MQ=9) tGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATgg > 2:1749089/1‑149 (MQ=9) tGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGt < 1:3093637/150‑1 (MQ=9) gTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTACTATATGAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAg < 2:4416935/150‑1 (MQ=255) agatacttCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGca > 1:1327080/7‑149 (MQ=12) agatacttCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGca < 1:4184305/144‑2 (MQ=12) agatacttCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGca < 1:2937971/144‑2 (MQ=12) gatacttCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGcag > 2:4452055/6‑148 (MQ=12) atacttCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAagcagc > 2:2907597/5‑150 (MQ=12) acttCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCtt < 1:3564206/148‑1 (MQ=12) acttCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCtn < 2:3368629/148‑2 (MQ=12) ttCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGa > 1:897657/1‑150 (MQ=12) cACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGt > 2:3621762/1‑150 (MQ=16) cGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTAt < 2:3103458/150‑1 (MQ=16) cGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTAt > 2:4162354/1‑150 (MQ=17) ggTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATc < 1:4271663/150‑1 (MQ=12) gTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATcc < 1:2555602/150‑1 (MQ=16) gTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATcc > 2:149283/1‑150 (MQ=17) gTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATcc < 1:1754624/150‑1 (MQ=12) gttgATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATccc > 1:3122962/4‑150 (MQ=12) cGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGt > 2:2151168/1‑150 (MQ=12) tGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtttc < 1:3376028/150‑1 (MQ=12) ctctGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtttctt < 1:1203878/150‑1 (MQ=12) tctGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtttcttg > 1:1000590/1‑149 (MQ=12) tctGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtttcttg > 1:1491328/1‑149 (MQ=9) ctGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtttcttgc < 2:1640797/150‑3 (MQ=12) tGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCg < 2:2834904/150‑1 (MQ=12) tGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCg < 1:445026/150‑1 (MQ=12) gTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGt < 1:1900206/150‑1 (MQ=255) tCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGCGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTCTGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTa < 2:4204443/150‑1 (MQ=255) tCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTTTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTa > 2:3202362/1‑150 (MQ=255) tCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTa < 1:813718/150‑1 (MQ=255) cTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTag > 1:2217014/1‑149 (MQ=12) tAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGcc < 1:4516769/150‑1 (MQ=255) tAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCAGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGAAGATTGAGTATCACGTTTCTTGCGTagcc > 1:3943013/1‑147 (MQ=255) aGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCa > 1:4074493/1‑150 (MQ=255) aaccgttACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTa < 2:3242799/145‑1 (MQ=255) aaccgttACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTa > 1:527781/6‑150 (MQ=12) ccgttACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTaaa < 2:4021602/147‑1 (MQ=255) ccgttACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTaaa < 1:168058/147‑1 (MQ=12) gttACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGt < 2:2617598/149‑1 (MQ=255) gttACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGt > 2:3947517/2‑150 (MQ=255) gttACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGt > 1:2752651/2‑150 (MQ=12) ttACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTc > 1:2847405/1‑150 (MQ=255) tACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCa < 1:3832838/150‑1 (MQ=255) tACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCa > 2:4317861/1‑150 (MQ=12) tACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCa > 2:2212235/1‑150 (MQ=17) aCTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCaa > 1:4127693/1‑150 (MQ=12) ctctGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAAt > 2:1110329/1‑150 (MQ=255) tctGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATc > 1:2152506/1‑150 (MQ=255) ctGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATcc > 2:4568474/1‑150 (MQ=255) tGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCa < 2:39126/150‑1 (MQ=255) tGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCa > 2:4052897/1‑150 (MQ=12) gTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCat > 1:3270370/1‑149 (MQ=16) aactttCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatcc > 2:2768481/4‑147 (MQ=255) aactttCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatcc > 1:1258693/4‑147 (MQ=16) aactttCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatcc > 1:751730/4‑147 (MQ=16) actttCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatccg > 1:2340986/3‑146 (MQ=255) actttCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatccg > 2:3809385/3‑146 (MQ=255) actttCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatccg > 1:351232/3‑146 (MQ=16) actttCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatccg < 1:1072313/148‑5 (MQ=16) | GGTTGAGGCAGTACGTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCTATTAGATTGTTAAGGTATTTCACGGTTCGATGCTCTGTCTTAGTATATAATTCATTACTCTGTAATTTTCTAAAGGCAGAGCCAATAGACGGAGCTTTATCCGTGACAATTACTCTAGGTTCAACAAACTGCTTATGTAGTCGTTTCAAGAATGCATAAGCCGCTTGAGTATCCCGTTTCTTTCGTAACCAGATATCTAAAGTCAATCCAAACT > CP043523/1882486‑1882766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |