| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP043523 | 1,882,642 | C→G | intergenic (+353/‑202) | FTN78_chr1926 → / → FTN78_chr1927 | hypothetical protein/3‑ketoacyl‑CoA thiolase, Acetyl‑CoA acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP043523 | 1,882,642 | 0 | C | G | 99.7% | 1366.0 / NA | 612 | intergenic (+353/‑202) | FTN78_chr1926/FTN78_chr1927 | hypothetical protein/3‑ketoacyl‑CoA thiolase, Acetyl‑CoA acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (377/232); minor base T (1/1); total (379/233) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 623 total aligned reads displayed.
AGTACGTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCTATTAGATTGTTAAGGTATTTCACGGTTCGATGCTCTGTCTTAGTATATAATTCATTACTCTGTAATTTTCTAAAGGCAGAGCCAATAGACGGAGCTTTATCCGTGACAATTACTCTAGGTTCAACAAACTGCTTATGTAGTCGTTTCAAGAATGCATAAGCCGCTTGAGTATCCCGTTTCTTTCGTAACCAGATATCTAAAGTCAATCCAAACTGGA > CP043523/1882495‑1882769 | aGTTCGTCGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATAGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTGCTCTGTAACTTTCTAAATGCAGAACCAATAGAggg < 2:2245339/150‑1 (MQ=9) tAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCttt < 2:3143510/150‑1 (MQ=9) aGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTa > 2:2041675/1‑150 (MQ=17) aGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTa > 2:449256/1‑150 (MQ=12) aCTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATc > 2:1810372/1‑150 (MQ=12) aCTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATc > 1:1730049/1‑150 (MQ=12) cTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATcc < 2:1932371/150‑1 (MQ=12) cTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATcc > 1:4008819/1‑150 (MQ=12) gATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTAAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGa > 2:3257722/1‑150 (MQ=17) aTAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGAc < 2:2137585/150‑1 (MQ=12) aTAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGAc > 1:1251192/1‑150 (MQ=12) tAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACa < 2:396704/150‑1 (MQ=12) aaaaTTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACaa > 2:2717869/1‑150 (MQ=12) aaaaTTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACaa > 2:818349/1‑150 (MQ=12) aaaTTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAAt < 2:2356568/150‑1 (MQ=12) aaaTTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAAt > 2:2429317/1‑150 (MQ=12) aaTTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAAtt < 2:475212/150‑1 (MQ=12) aaTTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAAtt > 2:402865/1‑150 (MQ=12) aaTTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAAtt < 2:3174047/150‑1 (MQ=12) aaTTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAAtt < 1:467943/150‑1 (MQ=12) aTTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTa > 1:2628250/1‑150 (MQ=12) ttATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTAct > 1:202269/1‑150 (MQ=18) aTTGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTActct > 1:2510751/1‑150 (MQ=12) ttGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTActctt > 2:3772163/1‑149 (MQ=16) tGCGTCGTTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAAt < 2:3088031/142‑1 (MQ=12) cgtcgtTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGt > 2:4450857/1‑150 (MQ=12) gtcgtTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGtt > 2:937403/1‑150 (MQ=12) gtTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGttgac > 2:3713546/1‑147 (MQ=12) gtTTGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGttgac < 2:1247714/150‑4 (MQ=12) ttGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGttgacca > 2:86439/1‑145 (MQ=12) ttGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGttgacca < 2:2504325/150‑6 (MQ=12) ttGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGttgacca < 2:4566488/150‑6 (MQ=12) tGATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGttgaccaa > 2:611834/1‑144 (MQ=12) gATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGttgaccaaa > 1:3851643/1‑143 (MQ=12) gATTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGttgaccaaa > 1:3294201/1‑143 (MQ=12) aTTGGTCGATGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAAc > 2:562168/1‑150 (MQ=12) aTGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATg < 2:3868056/150‑1 (MQ=12) tGGTCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATgg < 2:2771129/150‑2 (MQ=9) tGGTCTTGCTCAATGAGGTTATTGAGATACTTCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGt < 1:3093637/150‑1 (MQ=9) tCTTGCTCAATGAGGTTATTGAGATACTTCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGt < 2:146928/150‑1 (MQ=9) agatacttCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGca > 1:1327080/7‑149 (MQ=12) gatacttCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGcag > 1:3460764/6‑148 (MQ=12) atacttCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAagcagc > 2:2907597/5‑150 (MQ=12) atacttCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGcagc > 1:1634888/5‑147 (MQ=12) tacttCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCt > 1:3554006/4‑150 (MQ=17) acttCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCtn < 2:3368629/148‑2 (MQ=12) ttCGCGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGa > 1:897657/1‑150 (MQ=12) ttCACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGa < 2:1989940/150‑1 (MQ=16) tcgcGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAg < 1:412891/147‑1 (MQ=12) tcgcGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAg > 1:4337152/4‑150 (MQ=12) cgcGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGt < 1:3758432/148‑1 (MQ=12) cgcGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGt < 1:4532945/148‑1 (MQ=12) cACGGTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGt > 2:3621762/1‑150 (MQ=16) gTTCGATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATcc < 1:2556406/150‑1 (MQ=17) gttgATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATccc > 1:3122962/4‑150 (MQ=12) gATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtt < 2:3455785/150‑1 (MQ=12) gATGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtt > 1:4083342/1‑150 (MQ=12) aTGCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGttt > 2:4096726/1‑150 (MQ=12) gCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtttct < 2:1323797/150‑1 (MQ=17) gCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtttct > 1:3366160/1‑150 (MQ=17) gCTCTGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtttct < 1:538916/150‑1 (MQ=12) ntctGCCTTAGTATATAAACCGTTACTCTGTAACTTTCTGAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtttctt > 2:4242884/2‑150 (MQ=12) ctctGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtttctt < 1:1203878/150‑1 (MQ=12) tctGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtttcttg > 1:1000590/1‑149 (MQ=12) tctGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGtttcttg > 1:1491328/1‑149 (MQ=9) tGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCg > 1:3011559/1‑150 (MQ=12) tGTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCg < 2:2834904/150‑1 (MQ=12) gTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGt > 2:754959/1‑150 (MQ=255) gTCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGt > 1:3664087/1‑150 (MQ=255) tCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTTTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTa > 2:3202362/1‑150 (MQ=255) tCTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTa < 1:813718/150‑1 (MQ=255) cTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTag < 1:2363248/150‑2 (MQ=255) cTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGTAGAACCAAGAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTGGACCAAACTGTTTATGTAGCCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTag > 2:1063409/1‑149 (MQ=255) cTTAGTATATAAACCGTTACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTag > 1:2217014/1‑149 (MQ=12) aaaccgttACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCt > 2:3929984/7‑150 (MQ=255) aaccgttACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTa > 1:4477169/6‑150 (MQ=255) aaccgttACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACAGTTTATGTAGTCGTTTCAAGAACGCTTAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTa > 1:2880054/6‑150 (MQ=255) ccgttACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTaaa < 2:4190915/147‑1 (MQ=255) ccgttACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTaaa < 1:167611/147‑1 (MQ=12) cgttACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAg > 2:129495/3‑150 (MQ=255) gttACTCTGTCACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTAACAGTGACAATTACTCTTGGTTGAACAAACTGTATATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATATCTAAAGt > 2:4375223/2‑150 (MQ=255) gttACTCTGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGt < 2:2617598/149‑1 (MQ=255) gttACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGt > 1:4250786/2‑150 (MQ=12) gttACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGt > 1:2752462/2‑150 (MQ=12) tACTCTGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCa > 2:158442/1‑150 (MQ=12) ctctGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAAt > 2:1107937/1‑150 (MQ=255) ctctGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAAt < 1:633934/150‑1 (MQ=12) tctGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATc > 1:2152506/1‑150 (MQ=255) ctGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATcc < 2:1730049/150‑1 (MQ=255) ctGTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATcc < 1:3903715/150‑1 (MQ=17) tGTAACTTTCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCa > 1:320632/1‑150 (MQ=255) gTAACTTTCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCat > 1:3270370/1‑149 (MQ=16) aactttCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatcc < 1:1869546/147‑4 (MQ=255) aactttCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatcc < 2:2108290/147‑4 (MQ=255) aactttCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatcc > 1:751730/4‑147 (MQ=16) actttCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTCGCCAGATGTCTAAAGTCAATCCatccg < 2:1665487/148‑5 (MQ=255) actttCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatccg > 2:3809385/3‑146 (MQ=255) actttCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatccg < 2:1150113/148‑5 (MQ=255) actttCTAAATGCAGAACCAATAGAGGGCGATTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGGAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatccg < 1:1072313/148‑5 (MQ=16) ttCTAAATGTAGAACCAATAGAGGGCGCTTTATCCGTGACAATTACTCTTGGTTGACCAAACTGTTTATGTAGTCGTTTCAAGAACGCATAAGCAGCTTGAGTATCCCGTTTCTTGCGTAGCCAGATGTCTAAAGTCAATCCatccgcat > 2:3578439/1‑143 (MQ=255) | AGTACGTAGACTTCGATAAAATTTATTGCGTCGTTTGATTGGTCGATGGTCTTGCTCTATTAGATTGTTAAGGTATTTCACGGTTCGATGCTCTGTCTTAGTATATAATTCATTACTCTGTAATTTTCTAAAGGCAGAGCCAATAGACGGAGCTTTATCCGTGACAATTACTCTAGGTTCAACAAACTGCTTATGTAGTCGTTTCAAGAATGCATAAGCCGCTTGAGTATCCCGTTTCTTTCGTAACCAGATATCTAAAGTCAATCCAAACTGGA > CP043523/1882495‑1882769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |