| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP043523 | 1,815,141 | (A)6→5 | intergenic (‑69/+84) | FTN78_chr1855 ← / ← FTN78_chr1856 | GTP‑sensing transcriptional pleiotropic repressor codY/Alanine transaminase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP043523 | 1,815,136 | 0 | A | . | 99.2% | 2698.2 / 6.8 | 516 | intergenic (‑64/+89) | FTN78_chr1855/FTN78_chr1856 | GTP‑sensing transcriptional pleiotropic repressor codY/Alanine transaminase |
| Reads supporting (aligned to +/- strand): ref base A (2/2); new base . (253/259); total (255/261) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 542 total aligned reads displayed.
ATATGGCAACTCTTGTTGCAAATCGGTCACTCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACATAAAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAACGTTCCATTTTTTCTTGTATTTCCGCTAAT > CP043523/1814989‑1815279 | tatGGCAACTCTTGTTGCAAATCGGTCACTCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACATaa < 1:2108204/148‑1 (MQ=255) tGGCAACTCTTGTTGCAAATCGGTCACTCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACATaaaa > 2:1633385/1‑148 (MQ=255) gaaaCTTTTGTTGCAAATCGGTCACTCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACATaaaaag < 2:909610/146‑2 (MQ=255) aCTCTTGTTGCAAATCGGTCACTCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACATaaaaagcat < 1:3543581/148‑5 (MQ=255) tctTGTTGCAAATCGGTCACTCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGa < 2:2084983/148‑1 (MQ=255) tgttgCAAATCGGTCACTCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGaaaa < 1:2051736/148‑1 (MQ=255) gttgCAAATCGGTCACTCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGaaaaa > 1:1055509/1‑148 (MQ=255) gttgCAAATCGGTCACTCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGaaaaa < 1:217616/148‑1 (MQ=255) ttgCAAATCGGTCACTCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAAc > 1:4167387/1‑148 (MQ=255) gCAAATCGGTCACTCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACaa < 1:4394958/148‑1 (MQ=255) cAAATCGGTCACTCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAAt < 1:643840/148‑1 (MQ=255) aaTCGGTCACTCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATaa > 2:554450/1‑148 (MQ=255) aTCGGTCACTCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATaaa < 1:2399207/148‑1 (MQ=255) cGGTCACTCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATaaaaa > 1:3896059/1‑148 (MQ=255) gTCACTCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAAtt > 1:3205755/1‑148 (MQ=255) tCACTCCATCTTGCAAAATCGCGGTGATTTTACGTGTTATTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTTTTGTTTTTATACAAAATTTTTCATAATCAGTATAATAT‑AAAAAGCATGAAAAACAATAAAAATTg > 2:1288735/1‑148 (MQ=255) cTCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCa < 1:1307719/148‑1 (MQ=255) tCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAg < 1:3003436/148‑1 (MQ=255) tCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTGCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAg > 2:1347980/1‑148 (MQ=255) cATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGaa > 2:85600/1‑148 (MQ=255) tCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGaaaa > 1:3160480/1‑148 (MQ=255) tCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCGCCTATTTTTTTATATTCTGGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGaaaa > 2:1998967/1‑148 (MQ=255) cTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAAt < 1:2900182/148‑1 (MQ=255) ttGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTTTTTTTTTTTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAAtt > 2:656398/1‑148 (MQ=255) ttGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAAtt < 2:2787045/148‑1 (MQ=255) ttGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAAtt < 2:3123413/148‑1 (MQ=255) tGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTa < 1:2802887/148‑1 (MQ=255) aaTCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACtctc > 1:856581/1‑148 (MQ=255) tCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAACAAAAATTGTCAGAAAATTACTCTcaa < 2:2919111/148‑1 (MQ=255) gcgGTGATTTTACGTGTTTTTTTTTGTTTTGTAGCCACTTTGTTCTCCTCTTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATACTCAGTATATCCT‑AAAATGCATGAAAAAAAATAAAAATTGTCAGAAATTTtctctctatc > 2:3834932/1‑144 (MQ=255) cgGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTcaacaa < 1:498155/148‑1 (MQ=255) ggTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACaaa < 2:4498734/148‑1 (MQ=255) ggTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACaaa > 1:1154359/1‑148 (MQ=255) gTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACaaaa < 1:2374338/148‑1 (MQ=255) tGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACaaaaa > 1:1146751/1‑148 (MQ=255) gATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACaaaaaa > 1:1985495/1‑148 (MQ=255) gATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACaaaaaa > 2:1044937/1‑148 (MQ=255) aTTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACaaaaaaa > 1:1253208/1‑148 (MQ=255) ttttACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAg > 1:4055267/1‑148 (MQ=255) tttACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGa > 2:2120484/1‑148 (MQ=255) tCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAattatt > 1:187205/1‑148 (MQ=255) tCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAattatt < 1:994858/148‑1 (MQ=255) cAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGTATTATTc > 2:1232186/1‑148 (MQ=255) cAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTc < 1:762794/148‑1 (MQ=255) aGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCAt < 1:3812368/148‑1 (MQ=255) aGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCAt < 2:438047/148‑1 (MQ=255) tAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATAc > 1:4346502/1‑148 (MQ=255) tGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATc > 2:3659298/1‑148 (MQ=255) gTAGCCACTTTTGTCTACTATTTATTTATATTCTTGTTTTAATACAAAATTTTTCATAAACATTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAACATTACTCTAAACAAAAAAAGATATACGAATTATTCATACATCt < 2:2243211/148‑1 (MQ=255) tAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACACACAACAAAAAAAGATATACGAATTATTCATACATCtt < 2:1757981/148‑1 (MQ=255) aGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCttt > 2:703105/1‑148 (MQ=255) aGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCttt < 1:4421771/148‑1 (MQ=255) aGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCAAAAAAAAAAAAGATATACGAATTATTCATACATCttt < 2:235626/148‑1 (MQ=255) gCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCtttt < 2:4168440/148‑1 (MQ=255) gCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCtttt > 2:332082/1‑148 (MQ=255) ccACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCttttt < 1:4695991/148‑1 (MQ=255) tttGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCtat > 1:3602594/1‑148 (MQ=255) tttGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATAttttttttt > 1:2615946/1‑144 (MQ=255) gTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCtattta < 1:1632285/148‑1 (MQ=255) ctcCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATttatta < 2:3452529/148‑1 (MQ=255) ccTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTattatt < 1:3413649/148‑1 (MQ=255) ccTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTattatt > 1:450607/1‑148 (MQ=255) cTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTAttt > 1:3320654/1‑148 (MQ=255) aTTTTTTTATATTCTTGTTTTTATACAAAATTGTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAGACAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTAc > 1:4241752/1‑148 (MQ=255) ttttttATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGa < 1:1421888/148‑1 (MQ=255) tttttATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGat > 1:3074569/1‑148 (MQ=255) ttttATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGata < 2:3767232/148‑1 (MQ=255) ttttATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAACCATGAAAAACAATAAAAATTGTCAGAAAATTACTCACAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGata < 1:1950193/148‑1 (MQ=255) tttATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGatat < 2:4594656/148‑1 (MQ=255) tttATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGatat > 2:4281045/1‑148 (MQ=255) ttATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATAtt > 1:1508525/1‑148 (MQ=255) tataTTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTg > 1:832447/1‑148 (MQ=255) atatTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGc > 2:1681698/1‑148 (MQ=255) atatTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTAACAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGc < 2:3013775/148‑1 (MQ=255) tatTCTTGTTTTTTTTTATTTTTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGcc > 2:3990990/1‑148 (MQ=255) tatTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGcc < 2:352750/148‑1 (MQ=255) ctcgTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCGTTTACTATTTATTATTTACGATATTGCCAAAg > 2:4051588/4‑148 (MQ=255) cTTGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAg < 2:1442366/148‑1 (MQ=255) ttGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAgg < 2:1812418/148‑1 (MQ=255) ttGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAgg > 2:1568832/1‑148 (MQ=255) tGTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGa < 2:390349/148‑1 (MQ=255) gTTTTTATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGaa < 2:2572190/148‑1 (MQ=255) ttttATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAAc < 1:171433/148‑1 (MQ=255) tttATACAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAACg > 1:2648331/1‑148 (MQ=255) tataCAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAACGtt > 1:535896/1‑148 (MQ=255) ataCAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAACGTTc > 1:445421/1‑148 (MQ=255) cAAAATTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAACGTTCCAt > 1:4107554/1‑148 (MQ=255) aagtgtttCATATTAATTATAACAT‑AAAAAGCATGAAAAAAAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAACGTTCCAttt < 2:3207559/143‑1 (MQ=255) aTTTTTCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAACGTTCCAttttt < 1:1354197/148‑1 (MQ=255) tttCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAACGTTCCATTTTTTCt > 2:4231281/1‑148 (MQ=255) ttCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAACGTTCCATTTTTTCtt < 2:2453375/148‑1 (MQ=255) ttCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAACGTTCCATTTTTTCtt > 2:4709172/1‑148 (MQ=255) tCATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAACGTTCCATTTTTTCTTg > 1:2494026/1‑148 (MQ=255) cATAATCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAACGTTCCATTTTTTCTTGt > 1:2457854/1‑148 (MQ=255) aaTCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAACGTTCCATTTTTTCTTGTAtt > 2:1518823/1‑148 (MQ=255) aTCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAACGTTCCATTTTTTCTTGTAttt < 2:778587/148‑1 (MQ=255) tCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCGGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAACGTTCCATTTTTTCTTGTATTTc < 2:1746127/148‑1 (MQ=255) tCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAACGTTCCATTTTTTCTTGTATTTc < 1:3986647/148‑1 (MQ=255) tCAGTATAACAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAACGTTCCATTTTTTCTTGTATTTc > 1:2267630/1‑148 (MQ=255) aaCAT‑AAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAACGTTCCATTTTTTCTTGTATTTCCGCTAAt > 1:4294231/1‑148 (MQ=255) | ATATGGCAACTCTTGTTGCAAATCGGTCACTCCATCTTGCAAAATCGCGGTGATTTTACGTGTTTTTTCAAGTAATGTAGCCACTTTGTTCTCCTATTTTTTTATATTCTTGTTTTTATACAAAATTTTTCATAATCAGTATAACATAAAAAAGCATGAAAAACAATAAAAATTGTCAGAAAATTACTCTCAACAAAAAAAGATATACGAATTATTCATACATCTTTTTCTATTTATTATTTACGATATTGCCAAAGGAAACGTTCCATTTTTTCTTGTATTTCCGCTAAT > CP043523/1814989‑1815279 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |