Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP043523 | 2,059,908 | 0 | G | A | 55.7% | 280.9 / inf | 1062 | Y351Y (TAC→TAT) | FTN78_chr2133 | D‑alanyl‑D‑alanine carboxypeptidase |
Reads supporting (aligned to +/- strand): ref base G (250/220); new base A (290/301); total (541/521) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.94e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.21e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 1065 total aligned reads displayed.
ATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAATCATCTAAGGATTGATTTTTTTGCACAAGACTGGTCGTACGCCAATGACCATAAACATAGTTC > CP043523/2059761‑2060055 | tttGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGt > 1:82118/1‑148 (MQ=255) tGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATaa > 1:3585753/1‑148 (MQ=255) tGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTaa < 2:156205/148‑1 (MQ=255) ggAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAg > 1:2476995/1‑148 (MQ=255) aGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGaa < 1:1703940/148‑1 (MQ=255) gATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGaac > 1:1621329/1‑148 (MQ=255) gATAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGaac > 1:366153/1‑148 (MQ=255) gATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGaac > 1:1218270/1‑148 (MQ=255) tAGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGaacaa < 2:2600997/148‑1 (MQ=255) aGCCTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGATTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTCGCATAAGGaacaac > 2:1339445/1‑148 (MQ=255) cTAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACggg > 2:1641016/1‑148 (MQ=255) tAAACTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGa < 1:4645120/148‑1 (MQ=255) aaaCTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAg > 2:80816/1‑148 (MQ=255) aaaCTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAg > 2:3110001/1‑148 (MQ=255) aaaCTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTGTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTAGTGAAGTTTTCTGTCAGTGATTTTGTATCTGCAGTACCATGTGTAGCATAAGTAACGACggggg > 1:4404599/1‑146 (MQ=255) aaCTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGt < 1:410519/148‑1 (MQ=255) cTATCCTTTACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGa < 2:2954220/148‑1 (MQ=255) tATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGat < 2:1151614/148‑1 (MQ=255) tATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGat > 1:1110098/1‑148 (MQ=255) ttACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTtg > 1:4542776/1‑148 (MQ=255) tACTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTtgt < 1:291803/148‑1 (MQ=255) aCTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTtgtg < 1:88804/148‑1 (MQ=255) cTGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTgg < 1:181590/148‑1 (MQ=255) tGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGa > 2:4586757/1‑148 (MQ=255) tGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGa > 1:2653623/1‑148 (MQ=255) tGTAGTAGAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGa < 1:2536304/148‑1 (MQ=255) tagtagAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGc < 2:73362/148‑1 (MQ=255) agtagAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCa > 2:2385737/1‑148 (MQ=255) agtagAAAGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCa < 2:4682102/148‑1 (MQ=255) tggAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAAc < 2:2528093/146‑1 (MQ=255) tagAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAAc < 2:2674664/148‑1 (MQ=255) tagAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAAc > 1:384669/1‑148 (MQ=255) aaaGTGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAg < 1:3288981/148‑1 (MQ=255) aagtgTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGt < 2:2047681/144‑1 (MQ=255) gagTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTg < 1:2076011/148‑1 (MQ=255) tGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAAc < 1:2124034/148‑1 (MQ=255) aGTTTTTGGTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGAtt > 1:2984166/1‑148 (MQ=255) tttttttttttttCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTTTATCTGCACTACCATCTTTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATttttc > 2:277082/6‑148 (MQ=255) tttttttttttttCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACTATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATttttc > 2:3382735/6‑148 (MQ=255) tttGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATttttc > 1:231151/1‑148 (MQ=255) tttGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATttttc > 2:4109325/1‑148 (MQ=255) ggTTTTTAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATttttcttt < 2:1947850/148‑1 (MQ=255) gTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATttttctttt > 1:1895120/1‑148 (MQ=255) ttAGTCACAGTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCat < 1:742497/148‑1 (MQ=255) aGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCatca > 2:2251854/1‑148 (MQ=255) aGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCatca < 2:4164143/148‑1 (MQ=255) cacaGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCatcaatc < 2:630304/148‑1 (MQ=255) aGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATcaca > 1:3759076/1‑148 (MQ=255) gTTGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAg > 2:4424727/1‑148 (MQ=255) tGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAgca > 2:3513348/1‑146 (MQ=255) tGCTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAgca < 2:1243668/148‑3 (MQ=255) tGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTa < 1:1290911/148‑1 (MQ=255) gCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTaa > 1:939464/1‑148 (MQ=255) cTTCAACTGAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAAt < 2:4016218/148‑1 (MQ=255) cAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTc > 1:1559742/1‑148 (MQ=255) ctgAGGCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCttt < 2:288086/146‑1 (MQ=255) ggCTGTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTaaaa < 2:232807/148‑1 (MQ=255) cTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAatc > 1:3459741/1‑148 (MQ=255) gTTTTTTTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAatcat > 2:1784927/1‑148 (MQ=255) gTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAatcat < 2:4345072/148‑1 (MQ=255) ttttTCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTa < 1:54789/148‑1 (MQ=255) ttttcTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTaa > 2:905226/5‑148 (MQ=255) ttttCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCCTCAGTCACGGCAATTTCTTTAAAATCATCCaa > 2:3678840/1‑148 (MQ=255) ttcTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAgg > 2:2101517/3‑148 (MQ=255) tcTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGga > 2:2423155/2‑148 (MQ=255) cTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAATCATCTAAGgat > 2:527580/1‑148 (MQ=255) ttACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGgatt < 2:3028277/148‑1 (MQ=255) tACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGgattt > 1:2412768/1‑147 (MQ=255) tcTGCATTTGACTGTCAGTGATTTTGTACCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGgattta < 1:1013702/147‑3 (MQ=255) tGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGgatttatt > 1:1351066/1‑148 (MQ=255) gAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGGatttattt < 2:282979/148‑1 (MQ=255) aaTTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAATCATCTAAGGATTGAtttt < 2:1385546/148‑1 (MQ=255) aaTTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAATCATCTAAGGATTGAtttt > 1:3396010/1‑148 (MQ=255) aTTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGGATTTAttttt > 2:3896389/1‑148 (MQ=255) tttGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGGATTTAtttttt < 1:3912163/148‑1 (MQ=255) gACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGGATTTATTTTTTTGc < 1:287080/148‑1 (MQ=255) tGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGGATTTATTTTTTTGcaca < 2:1084606/148‑1 (MQ=255) gTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAATCATCTAAGGATTGATTTTTTTGCACaa > 2:3165069/1‑148 (MQ=255) tGATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGGATTTATTTTTTTGCACAAGACTg > 1:3109053/1‑148 (MQ=255) gATTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGGATTTATTTTTTTGCACAAGACTgg < 2:3292717/148‑1 (MQ=255) aTTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAATCATCTAAGGATTGATTTTTTTGCACAAGACTGGt > 1:1463851/1‑148 (MQ=255) aTTTTGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGGATTTATTTTTTTGCACAAGACTGGt > 2:220902/1‑148 (MQ=255) ttGTATCTGCACTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGGATTTATTTTTTTGCACAAGACTGGTCGt < 1:2202710/148‑1 (MQ=255) tGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAATCATCTAAGGATTGATTTTTTTGCACAAGACTGGTCGTa > 1:4040880/1‑148 (MQ=255) gTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAATCATCTAAGGATTGATTTTTTTGCACAAGACTGGTCGTAc < 1:4697373/148‑1 (MQ=255) aCTACCATCTGTAGCGTAAGGAACACCGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAATCATCTAAGGATTGATTTTTTTGCACAAGACTGGTCGTACGCCAATGa < 2:3233198/148‑1 (MQ=255) cTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAATCATCTAAGGATTGATTTTTTTGCACAAGACTGGTCGTACGCCAATGAc > 1:660989/1‑148 (MQ=255) cTACCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGGATTTATTTTTTTGCACAAGACTGGTCGTACGCCAATGAc > 2:1886145/1‑148 (MQ=255) tACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAATCATCTAAGGATTGATTTTTTTGCACAAGACTGGTCGTACGCCAATGAcc < 2:3419776/148‑1 (MQ=255) aCCATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGGATTTATTTTTTTGCACAAGACTGGTCGTACGCCAATGACCa > 1:2842990/1‑148 (MQ=255) cATCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGGATTTATTTTTTTGCACAAGACTGGTCGTACGCCAATGACCATa < 1:4585689/148‑1 (MQ=255) tCTGTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGGATTTATTTTTTTGCACAAGACTGGTCGTACGCCAATGACCATaaa > 2:3603230/1‑148 (MQ=255) tGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAATCATCTAAGGATTGATTTTTTTGCACAAGACTGGTCGTACGCCAATGACCATGAACa < 2:4501494/148‑1 (MQ=255) tGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAATCATCTAAGGATTGATTTTTTTGCACAAGACTGGTCGTACGCCAATGACCATAAACa < 1:4300543/148‑1 (MQ=255) gTAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGGATTTATTTTTTTGCACAAGACTGGTCGTACGCCAATGACCATAAACAt > 2:4255847/1‑148 (MQ=255) tAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAATCATCTAAGGATTGATTTTTTTGCACAAGACTGGTCGTACGCCAATGACCATAAACATa > 2:3779785/1‑148 (MQ=255) tAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAATCATCTAAGGATTGATTTTTTTGCACAAGACTGGTCGTACGCCAATGACCATAAACATa > 1:422036/1‑148 (MQ=255) tAGCATAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAGTCACAGCAATTTCTTTAAAATCATCTAAGGATTTATTTTTTTGCACAAGACTGGTCGTACGCCAATGACCATAAACATa < 1:2767243/148‑1 (MQ=255) cGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAATCATCTAAGGATTGATTTTTTTTTACAATACTTGTCGTACGCCAATGACCATAAACATAGtt > 2:1037537/1‑148 (MQ=255) gTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAATCATCTAAGGATTGATTTTTTTGCACAAGACTGGTCGTACGCCAATGACCATAAACATAGTtc > 1:3192612/1‑148 (MQ=255) | ATTTGGAAGATAGCCTAAACTATCCTTTACTGTAGTAGAAAGAGTGACAAGTTTTTGGTTTTTAGTCACAGTTGCTTCAACGGAGGCTGTTTTTTCCTTACTGAATTTGACTGTCAGTGATTTTGTATCTGCACTACCATCTGTAGCGTAAGGAACAACGGGAGTGATATTTTGTGGAGCAACGAGTTGAACAGATTTTTCTTTTCCATCAATCACAGTAATTTCTTTAAAATCATCTAAGGATTGATTTTTTTGCACAAGACTGGTCGTACGCCAATGACCATAAACATAGTTC > CP043523/2059761‑2060055 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |