Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP043523 | 480,860 | 0 | C | T | 55.2% | 249.2 / inf | 1012 | L217L (TTG→TTA) | FTN78_chr0521 | Lead, cadmium, zinc and mercury transporting ATPase |
Reads supporting (aligned to +/- strand): ref base C (227/226); new base T (298/261); total (525/487) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.12e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 1017 total aligned reads displayed.
GTTTTGATTGAGGGAACCACCATAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCTTTCATCTCAATCAGGTGACCAATCAACATAATG > CP043523/480713‑481007 | gttTTGATTGAGGGAACCACCATAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGc > 2:557342/1‑148 (MQ=255) gttTTGATTGAGGGAACCACCATAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGc < 2:1514199/148‑1 (MQ=255) tttGATTGAGGGAACCACCATAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTaa < 1:3333503/148‑1 (MQ=255) tttGATTGAGGGAACCACCATAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTaa < 2:4025965/148‑1 (MQ=255) attgaGGGAACCACCATAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCg > 2:414783/1‑148 (MQ=255) ttgaGGGAACCACCATAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGc > 2:1020965/1‑148 (MQ=255) tgaGCGAACCACCATAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGcc < 2:3325117/148‑1 (MQ=255) gaGGGAACCACCATAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCa < 1:960053/148‑1 (MQ=255) gggAACCACCATAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAAc < 2:318528/148‑1 (MQ=255) gAACCACCATAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACtt > 2:457045/1‑148 (MQ=255) aaCCACCATAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACttt < 2:1584186/148‑1 (MQ=255) aaCCACCATAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACttt > 1:1662630/1‑148 (MQ=255) aaCCACCATAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACttt < 1:3059065/148‑1 (MQ=255) ccaccaTAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTa < 2:163826/148‑1 (MQ=255) ccaccaTAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTa > 2:4674934/1‑148 (MQ=255) ccaccaTAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTa > 2:2444366/1‑148 (MQ=255) caccaTAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAg > 2:1250456/1‑148 (MQ=255) ccaTAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGtt > 1:399384/1‑148 (MQ=255) caTAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTc > 2:4270756/1‑148 (MQ=255) caTAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTc < 2:1746363/148‑1 (MQ=255) aCAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGaaa > 2:778193/1‑148 (MQ=255) aCAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGaaa > 1:2451346/1‑148 (MQ=255) cAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAg > 1:1236766/1‑148 (MQ=255) aaGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGc > 2:2164694/1‑148 (MQ=255) aaGGTCATTTGTTTTCTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGc < 1:3865420/148‑1 (MQ=255) ggTCATTTGTTTTTTTATTTTTTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTATTGTTTTTTCACTAAAATCAAATCGCCAACTTTTAGTTCTGAAAGCTc > 2:1362064/1‑148 (MQ=255) gTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTcc > 1:157471/1‑148 (MQ=255) cATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCcac > 1:1719287/1‑148 (MQ=255) tttGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACAt > 2:1436643/1‑148 (MQ=255) ttGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATc > 2:3862090/1‑148 (MQ=255) ttGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATc > 1:3909712/1‑148 (MQ=255) tGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATcc < 1:4516818/148‑1 (MQ=255) tGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATcc > 1:4560100/1‑148 (MQ=255) gTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCt > 1:4456734/1‑148 (MQ=255) ttATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTcccgc > 1:3678731/1‑146 (MQ=255) ttGACGGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAGGCTCCACATCCTTCCCGCttc < 2:1960013/148‑2 (MQ=255) gACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACttttt < 2:3932886/148‑1 (MQ=255) aCTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTa < 2:2784282/148‑1 (MQ=255) gCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGt > 1:2364876/1‑148 (MQ=255) cTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTg < 2:62994/148‑1 (MQ=255) cGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTACACATCCTTCCCGCTTTTTAAGTGAg > 2:1130927/1‑148 (MQ=255) cTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCtt > 1:2647843/1‑148 (MQ=255) cTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCtt > 1:701442/1‑148 (MQ=255) cACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCtttttt > 1:2783753/1‑148 (MQ=255) ccAGTAATCATTGACTCATCAACGAGCGCTTCGCTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTGCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTgg > 1:4227333/1‑148 (MQ=255) cAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTggg < 1:479998/148‑1 (MQ=255) cAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTggg < 2:2061588/148‑1 (MQ=255) aGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGa < 2:1690107/148‑1 (MQ=255) aGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGa > 2:880368/1‑148 (MQ=255) gTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGaa > 1:1265017/1‑148 (MQ=255) aTCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACaa < 1:56719/148‑1 (MQ=255) aTTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGc > 1:3175340/1‑148 (MQ=255) ttGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCt < 1:628635/148‑1 (MQ=255) aCTCATCGACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGc < 2:3571618/148‑1 (MQ=255) aCTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGc < 1:3591423/148‑1 (MQ=255) aCTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGc < 2:188064/148‑1 (MQ=255) atcaACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTAGTTTCTCATTTTCTTTCACTTAAAGTAAATCGCCAGCTTTTAGTTCTGAAAGCTCCACTTCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTaaa < 2:2990515/148‑1 (MQ=255) tcaACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAAt > 1:1023889/1‑148 (MQ=255) caACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATc < 1:2250334/148‑1 (MQ=255) caACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATc < 2:1289933/148‑1 (MQ=255) aaCGAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCt > 2:2668369/1‑148 (MQ=255) gAGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTc < 2:2244754/148‑1 (MQ=255) aGCGCTTCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCa < 2:4485724/148‑1 (MQ=255) gcgcTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGTGAACAAGTCTTGCTAAATCTTTCaa > 2:2936897/1‑148 (MQ=255) ttCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCa < 2:1220784/148‑1 (MQ=255) tCACTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCAt > 2:435258/1‑148 (MQ=255) cACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATc > 1:4142165/1‑148 (MQ=255) aCTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCg < 1:85226/148‑1 (MQ=255) cTTAATATACGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGc < 1:2863151/148‑1 (MQ=255) cTTAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGc < 1:1137618/148‑1 (MQ=255) ttAATATAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGcc < 2:3277133/148‑1 (MQ=255) atatAAGGCCATCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGc > 2:2870303/1‑148 (MQ=255) atatAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTTGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGc < 2:685416/148‑1 (MQ=255) taAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCAcc > 1:4393367/1‑148 (MQ=255) taAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCAcc > 2:2334265/1‑148 (MQ=255) aaGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCCCATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAGCAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCAccc > 1:790905/1‑148 (MQ=255) aGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCa < 1:1830967/148‑1 (MQ=255) ggCCATCTGCAGGAATTTTTTCATTTTTTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCAt > 2:3064619/1‑148 (MQ=255) ccATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGa > 1:4587470/1‑148 (MQ=255) aTCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGAtt > 2:3756142/1‑148 (MQ=255) tCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTg > 2:1797438/1‑148 (MQ=255) tCTGCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTg > 2:3481697/1‑148 (MQ=255) gCAGGTATTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCtt > 1:1375558/1‑148 (MQ=255) aggtaTTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTATTTCTTAATGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCTTTc > 2:4395055/5‑148 (MQ=255) aggtaTTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCTTTc > 1:1338477/5‑148 (MQ=255) aTTTTCTCATTTTCTTTCACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCTTTCAtct > 1:2124986/1‑148 (MQ=255) ttttttCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCTTTCAtctc < 1:1516665/148‑1 (MQ=255) tttCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCTTTCATCTCAAt < 1:2184542/148‑1 (MQ=255) aTTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCTTTCATCTCAATCAgg < 1:2976188/148‑1 (MQ=255) aTTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCTTTCATCTCAATCAgg < 1:3511550/148‑1 (MQ=255) ttttCTTTCACTACAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCTTTCATCTCAATCAGGt > 1:3777271/1‑148 (MQ=255) tttctttcACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCTTTCATCTCAATCAGGTg < 2:3655523/148‑1 (MQ=255) tttctttcACTAAAAGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCTTTCATCTCAATCAGGTg > 2:2558625/1‑148 (MQ=255) tctttcACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCTTTCATCTCAATCAGGTGAc > 1:2006908/1‑148 (MQ=255) ctttcACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCTTTCATCTCAATCAGGTGAcc > 2:3397509/1‑148 (MQ=255) cACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCTTTCATCTCAATCAGGTGACCAATc > 1:3239707/1‑148 (MQ=255) aaaaGTAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCGCTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCTTTCATCTCAATCAGGTGACCAATCAACa > 1:432042/1‑148 (MQ=255) aaaaGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCTTTCATCTCAATCAGGTGACCAATCAACa > 1:2577175/1‑148 (MQ=255) gCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCTTTCATCTCAATCAGGTGACCAATCAACATAAt > 2:2480168/1‑148 (MQ=255) cAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCTTTCATCTCAATCAGGTGACCAATCAACATAATg > 1:3458374/1‑148 (MQ=255) | GTTTTGATTGAGGGAACCACCATAAACAAGGTCATTTGTTTTTTTATTGACTGCTCGGCTTTCACCAGTAATCATTGACTCATCAACGAGCGCTTCACTTAATATAAGGCCATCTGCAGGAATTTTTTCATTTTCTTTCACTAAAAGCAAATCGCCAACTTTTAGTTCTGAAAGCTCCACATCCTTCCCACTTTTTAAGTGAGCTTTTTTGGGAACAAGGCTTGCTAAATCTTTCAATGCATCGCCAGCACCCATGATTGCTTTCATCTCAATCAGGTGACCAATCAACATAATG > CP043523/480713‑481007 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |