Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0435231,319,0620GT55.4% 185.4 / inf 837V311V (GTC→GTA) FTN78_chr1341Competence protein CoiA
Reads supporting (aligned to +/- strand):  ref base G (187/186);  new base T (218/245);  total (406/431)
Fisher's exact test for biased strand distribution p-value = 4.04e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 841 total aligned reads displayed.

CAGTAATTTCATTTCTATTCTTAGCCATGAAGCTCACTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCAAGTAAGTTCAACCCCAAAGGCGCAATAAAAGAA  >  CP043523/1318915‑1319209
                                                                                                                                                   |                                                                                                                                                   
 aGTAATTTCATTTCTATTCTTAGCCATGAAGCTCACTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGa                                                                                                                                                    <  2:1968841/148‑1 (MQ=255)
    aaTTTCATTTCTATTCTTAGCCATGAAGCTCACTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTg                                                                                                                                                 <  2:4399931/148‑1 (MQ=255)
    aaTTTCATTTCTATTCTTAGCCATGAAGCTCACTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTg                                                                                                                                                 <  1:1306115/148‑1 (MQ=255)
    aaTTTCATTTCTATTCTTAGCCATGAAGCTCACTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCAGAGAAACGGGGAGGATATACTg                                                                                                                                                 <  1:2583088/148‑1 (MQ=255)
    aaTTTCATTTCTATTCTTAGCCATGAAGCTCACTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTg                                                                                                                                                 >  1:4213025/1‑148 (MQ=255)
     atttcatttcTATTCTTAGCCATGAAGCTCACTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGc                                                                                                                                                >  1:4344845/1‑148 (MQ=255)
       ttcatttcTATTCTTAGCCATGAAGCTCACTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCt                                                                                                                                              <  1:2539811/148‑1 (MQ=255)
        tcatttcTATTCTTAGCCATGAAGCTCACTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCtt                                                                                                                                             >  2:1430360/1‑148 (MQ=255)
          atttcTATTCTTAGCCATGAAGCTCACTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGCGGATAGACTGCCTCaa                                                                                                                                           >  2:1642359/1‑148 (MQ=255)
                aTTCTTAGCCATGAAGCTCACTCCTTTTTATTCAGAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTAt                                                                                                                                     <  1:541618/148‑1 (MQ=255)
                  tCTTAGCCATGAAGCTCACTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTAttt                                                                                                                                   >  2:481818/1‑148 (MQ=255)
                       gCCATGAAGCTCACTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTg                                                                                                                              <  1:1464929/148‑1 (MQ=255)
                        ccATGAAGCTCACTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGa                                                                                                                             <  1:4557523/148‑1 (MQ=255)
                        ccATGAAGCTCACTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGa                                                                                                                             <  1:3881655/148‑1 (MQ=255)
                         cATGAAGCTCACTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGaa                                                                                                                            <  1:227248/148‑1 (MQ=255)
                          aTGAAGCTCACTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGaaa                                                                                                                           >  2:1180018/1‑148 (MQ=255)
                                cTCACTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATttat                                                                                                                     <  2:3309650/148‑1 (MQ=255)
                                   aCTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTaa                                                                                                                  >  2:3758776/1‑148 (MQ=255)
                                   aCTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTaa                                                                                                                  >  1:4018614/1‑148 (MQ=255)
                                    cTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTaaa                                                                                                                 >  1:1025968/1‑148 (MQ=255)
                                       cTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAg                                                                                                              >  2:1932139/1‑148 (MQ=255)
                                       cTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAg                                                                                                              >  2:1734619/1‑148 (MQ=255)
                                             aTTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCa                                                                                                        <  1:4624562/148‑1 (MQ=255)
                                              ttCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCat                                                                                                       >  1:353829/1‑148 (MQ=255)
                                               tCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCata                                                                                                      <  2:268345/148‑1 (MQ=255)
                                                cAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCataa                                                                                                     >  1:172351/1‑148 (MQ=255)
                                                  aaaTAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCataata                                                                                                   <  1:1866269/148‑1 (MQ=255)
                                                   aataatTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCataatat                                                                                                  >  2:1265329/1‑147 (MQ=255)
                                                     taatTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATatag                                                                                                <  2:2260631/148‑1 (MQ=255)
                                                      aatTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAtaga                                                                                               <  2:1040887/148‑1 (MQ=255)
                                                      aatTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAgaga                                                                                               <  2:3853164/148‑1 (MQ=255)
                                                      aatTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAgaga                                                                                               >  2:570893/1‑148 (MQ=255)
                                                       atTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGAt                                                                                              <  1:2740007/148‑1 (MQ=255)
                                                         ttttATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTa                                                                                            <  1:2469104/148‑1 (MQ=255)
                                                         ttttATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTa                                                                                            <  1:3374223/148‑1 (MQ=255)
                                                           ttATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAat                                                                                          >  2:3677244/1‑148 (MQ=255)
                                                            tATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAata                                                                                         >  1:8113/1‑148 (MQ=255)
                                                            tATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAata                                                                                         >  2:3110549/1‑148 (MQ=255)
                                                              ttCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATAtt                                                                                       <  2:1089723/148‑1 (MQ=255)
                                                              ttCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATAtt                                                                                       <  1:4417094/148‑1 (MQ=255)
                                                               tCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTc                                                                                      >  2:392815/1‑148 (MQ=255)
                                                                  caTTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGc                                                                                   >  1:729514/1‑148 (MQ=255)
                                                                   aTTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCt                                                                                  >  1:1380264/1‑148 (MQ=255)
                                                                           cTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGa                                                                          <  2:4476652/148‑1 (MQ=255)
                                                                            ttattaGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAg                                                                         <  1:3735103/148‑1 (MQ=255)
                                                                               ttaGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTaa                                                                      >  1:3456735/1‑148 (MQ=255)
                                                                               ttaGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTaa                                                                      <  1:3228920/148‑1 (MQ=255)
                                                                                  gCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAAtt                                                                   >  1:3053630/1‑148 (MQ=255)
                                                                                   cAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAAttt                                                                  <  1:2412743/148‑1 (MQ=255)
                                                                                      aaTTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATg                                                               <  2:1517884/148‑1 (MQ=255)
                                                                                          tcattcattcatATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTaaa                                                           <  1:2819384/148‑1 (MQ=255)
                                                                                          tcattcattcatATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTaaa                                                           >  1:1620622/1‑148 (MQ=255)
                                                                                          tcattcattcatATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTaaa                                                           <  2:3606702/148‑1 (MQ=255)
                                                                                           cattcattcatATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTa                                                                 >  1:4098801/1‑141 (MQ=255)
                                                                                            attcattcatATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAgg                                                         >  1:480049/1‑148 (MQ=255)
                                                                                             ttcattcatATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAggg                                                        <  1:316912/148‑1 (MQ=255)
                                                                                              tcattcatATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGa                                                       <  2:2192478/148‑1 (MQ=255)
                                                                                              tcattcatATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGa                                                       >  2:4209380/1‑148 (MQ=255)
                                                                                               cattcatATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGAt                                                      <  2:2457944/148‑1 (MQ=255)
                                                                                               cattcatATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGAt                                                      <  2:4024448/148‑1 (MQ=255)
                                                                                               cattcatATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGAt                                                      <  1:3331436/148‑1 (MQ=255)
                                                                                                attcatATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGAtt                                                     <  1:647891/148‑1 (MQ=255)
                                                                                                attcatATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGAtt                                                     >  1:2642218/1‑148 (MQ=255)
                                                                                                attcatATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGAtt                                                     >  1:378247/1‑148 (MQ=255)
                                                                                                 ttcatATCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGAttt                                                    <  2:315705/148‑1 (MQ=255)
                                                                                                  tcatATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTtc                                                   >  1:1837398/1‑148 (MQ=255)
                                                                                                     tatCCTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTtcatc                                                >  1:2332637/1‑148 (MQ=255)
                                                                                                       tCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTtcatcat                                              <  2:3483420/148‑1 (MQ=255)
                                                                                                        ccTTCTTCTGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTtcatcatc                                             <  1:1992397/148‑1 (MQ=255)
                                                                                                         cttcttCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTtcatcatca                                            <  2:813130/148‑1 (MQ=255)
                                                                                                           tcttctGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCaaa                                          >  1:2960183/1‑148 (MQ=255)
                                                                                                            cttctGCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCaaaa                                         >  1:4484716/1‑148 (MQ=255)
                                                                                                             ttctGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCAACATCaaaaa                                        >  2:4496787/1‑148 (MQ=255)
                                                                                                              tctGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAAc                                       >  1:2157951/1‑148 (MQ=255)
                                                                                                               ctGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACt                                      <  2:84942/148‑1 (MQ=255)
                                                                                                                 gCTTTTTCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTc                                    >  2:2380215/1‑148 (MQ=255)
                                                                                                                   tttttCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCaa                                  <  1:1547908/148‑1 (MQ=255)
                                                                                                                   tttttCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCaa                                  <  1:1907404/148‑1 (MQ=255)
                                                                                                                     tttCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGTGATTTCATCATCAAAAACTTCaagt                                >  1:1172043/1‑148 (MQ=255)
                                                                                                                     tttCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCaagt                                >  2:1330416/1‑148 (MQ=255)
                                                                                                                      ttCATTATAGCATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCaagta                               <  1:2852565/148‑1 (MQ=255)
                                                                                                                      ttCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCaagta                               <  2:30368/148‑1 (MQ=255)
                                                                                                                        cATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCaagtaag                             <  2:294068/148‑1 (MQ=255)
                                                                                                                            atagcATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCAAGTAAGTTCa                         >  2:3240615/5‑148 (MQ=255)
                                                                                                                               gcATAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCAAGTAAGTTCaatc                      >  2:619645/2‑146 (MQ=255)
                                                                                                                                 aTAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCAAGTAAGTTCAAtccc                    <  2:2300626/148‑1 (MQ=255)
                                                                                                                                  tAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCAAGTAAGTTCAATCCCa                   >  2:4237911/1‑148 (MQ=255)
                                                                                                                                  tAGAAACGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGAATTTCATCATCAAAAACTTCAAGTAAGTTCAATCCCa                   >  2:209735/1‑148 (MQ=255)
                                                                                                                                  tAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCAAGTAAGTTCAACCCCa                   <  2:1139856/148‑1 (MQ=255)
                                                                                                                                   aGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCAAGTAAGTTCAACCCCaa                  <  2:1820493/148‑1 (MQ=255)
                                                                                                                                     aaaCGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATGATCAAAAACTTCAAGTAAGTTCAATCCCAAAg                <  1:581706/148‑1 (MQ=255)
                                                                                                                                       aCGGGGAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCAAGTAAGTTCAATCCCAAAGgc              >  1:1084251/1‑148 (MQ=255)
                                                                                                                                        cGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAGAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCAAGTAAGTTCAACCCCAAAGgcg             <  1:4249772/148‑1 (MQ=255)
                                                                                                                                         ggggAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCAAGTAAGTTCAATCCCAAAGgcgc            <  2:458962/148‑1 (MQ=255)
                                                                                                                                          gggAGGATATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCAAGTAAGTTCAATCCCAAAGGCGCa           >  2:4282715/1‑148 (MQ=255)
                                                                                                                                            gaggaTATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCAAGTAAGTTCAATCCCAAAGGCGCAAt         >  2:284810/1‑148 (MQ=255)
                                                                                                                                              ggaTATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCAAGTAAGTTCAATCCCAAAGGCGCAATaa       <  2:2579760/148‑1 (MQ=255)
                                                                                                                                               gaTATACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATATAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCAAGTAAGTTCAATCCCAAAGGCGCAATaaa      >  2:69881/1‑148 (MQ=255)
                                                                                                                                                  aGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCAAGTAAGTTCAACCCCAAAGGCGCAATAAAAGa   <  2:4163163/148‑1 (MQ=255)
                                                                                                                                                   gACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCAAGTAAGTTCAACCCCAAAGGCGCAATAAAAGaa  <  1:3664557/148‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CAGTAATTTCATTTCTATTCTTAGCCATGAAGCTCACTCCTTTTTATTCAAAATAATTTTTATTCACATTAAAAACTTATTAGCAGAATTTCATTCATTCATATCCTTCTTCTGCTTTTTCATTATAACATAGAAACGGGGAGGATAGACTGCCTTAAAGCTATTTTGCTGAAAATTTATTAAAAAGTTTTCATAATAGAGATTAATATTCTGCTTAATTTGAGTAAATTTATGTAAAGGGATTTCATCATCAAAAACTTCAAGTAAGTTCAACCCCAAAGGCGCAATAAAAGAA  >  CP043523/1318915‑1319209

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑