Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP043523 | 1,883,826 | 0 | C | A | 63.7% | 990.2 / inf | 1137 | Q26K (CAA→AAA) | FTN78_chr1929 | Transposase TnpA |
Reads supporting (aligned to +/- strand): ref base C (197/215); new base A (377/347); total (574/563) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.75e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 1143 total aligned reads displayed.
GGATCAAGGAAGCCAATTTAAATCAGCTTCCTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCCTATGATAATGCCGTCACTGATGTCTTTTTCAAGTATCTTAAACAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTT > CP043523/1883693‑1883971 | tttAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTc < 1:307593/148‑1 (MQ=255) gTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAActctct > 1:2768480/1‑148 (MQ=255) ttaGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCt > 2:3622632/1‑148 (MQ=255) taGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCtt > 1:1822664/1‑148 (MQ=255) aTGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGa > 1:4612879/1‑148 (MQ=255) aTGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGa > 2:2519354/1‑148 (MQ=255) tGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGaa > 1:3414820/1‑148 (MQ=255) tatttgaaTTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATa > 2:1247662/7‑148 (MQ=255) tttgaaTTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACa < 1:1297245/144‑1 (MQ=255) tttgaaTTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACa < 2:2608572/144‑1 (MQ=255) cATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACa < 1:1575170/148‑1 (MQ=255) ttgaaTTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACAt > 1:555052/4‑148 (MQ=255) ttgaaTTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACAt < 2:2257482/145‑1 (MQ=255) tCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATc < 1:1617161/148‑1 (MQ=255) tCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATc < 1:2046280/148‑1 (MQ=255) gaaTTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCg < 1:2224762/147‑1 (MQ=255) ttgcttgcTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAAc > 1:3903977/1‑148 (MQ=255) ttgcttgcTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAAc > 2:3493570/1‑148 (MQ=255) ttgcttgcTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAAc < 1:2100375/148‑1 (MQ=255) ttgcttgcTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAAc > 2:924686/1‑148 (MQ=255) ttgcttCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAAtt < 1:2705760/148‑1 (MQ=255) ttgcttCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAAtt < 2:4129179/148‑1 (MQ=255) tcttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTtata < 1:1460647/148‑1 (MQ=255) tcttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTtata > 1:1402607/1‑148 (MQ=255) tcttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTtata < 1:4346004/148‑1 (MQ=255) cttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATaa < 2:4207146/148‑1 (MQ=255) ttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAAc > 2:82700/1‑148 (MQ=255) tACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACa < 2:2751637/148‑1 (MQ=255) aCTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACaa < 1:2322613/148‑1 (MQ=255) cTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAAt > 2:3137863/1‑148 (MQ=255) tCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAAtt > 2:3209699/1‑148 (MQ=255) tCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAAtt > 1:245121/1‑148 (MQ=255) cAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATtat < 1:814806/148‑1 (MQ=255) aaGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATtata < 1:932148/148‑1 (MQ=255) aaGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATtata < 2:1332004/148‑1 (MQ=255) aGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATaa < 1:1140486/148‑1 (MQ=255) aGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATaa < 1:2852570/148‑1 (MQ=255) aGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCCTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATaa < 2:4570113/148‑1 (MQ=255) ccTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATc < 2:4288749/148‑1 (MQ=255) tGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCt > 1:2915648/1‑148 (MQ=255) ggATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTc < 1:2983921/148‑1 (MQ=255) gATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCa < 2:3945215/148‑1 (MQ=255) gATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCa > 2:3438927/1‑148 (MQ=255) gATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCa < 1:2528763/148‑1 (MQ=255) tatCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCAtt > 1:2374372/1‑148 (MQ=255) tatCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCAtt > 1:3566606/1‑148 (MQ=255) tatCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCAtt > 2:1135562/1‑148 (MQ=255) tatCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCAtt < 2:3822920/148‑1 (MQ=255) tCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTcc > 2:2899100/1‑148 (MQ=255) cttATGATAATGCCGTCACTGAGGTCTTTTTCATTTTTTTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGc > 2:2059747/3‑148 (MQ=255) cttATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGc < 2:4049263/146‑1 (MQ=255) tATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCca > 2:3345042/1‑148 (MQ=255) tATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCca > 1:3614391/1‑148 (MQ=255) tATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCca > 1:1713933/1‑148 (MQ=255) aTGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCcaa > 1:4522008/1‑148 (MQ=255) aTGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCcaa > 1:36501/1‑148 (MQ=255) tGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCcaac > 2:2832066/1‑148 (MQ=255) tGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCcaac > 2:1421868/1‑148 (MQ=255) gATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCcaaca < 1:2164497/148‑1 (MQ=255) tAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAt < 2:3548029/148‑1 (MQ=255) tAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCcaacaag > 1:3987751/1‑147 (MQ=255) gTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTaa < 2:1041962/148‑1 (MQ=255) aCTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTc < 2:4382968/148‑1 (MQ=255) aCTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTc > 1:630648/1‑148 (MQ=255) aCTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTc > 2:2696743/1‑148 (MQ=255) tgaggTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCa < 1:439465/144‑1 (MQ=255) gaggTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCaa > 1:124032/4‑148 (MQ=255) gaggTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCaa < 1:4209157/145‑1 (MQ=255) ggTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAAt < 1:2607726/147‑1 (MQ=255) ggTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAAt < 2:1681709/147‑1 (MQ=255) gTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAAtc < 1:1060398/148‑2 (MQ=255) gTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAAtc > 1:4087200/1‑147 (MQ=255) tCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTa > 2:633700/1‑148 (MQ=255) tCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAAtca > 1:3368676/1‑146 (MQ=255) cTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTag < 2:515273/148‑1 (MQ=255) cTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAAtcag > 1:3799969/1‑145 (MQ=255) cTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCag < 1:2011832/148‑1 (MQ=255) ttttCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTagaa < 2:2184927/148‑1 (MQ=255) tttCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTagaaa > 2:241205/1‑148 (MQ=255) tttCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTagaaa > 1:318478/1‑148 (MQ=255) tttCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTagaaa > 1:1939178/1‑148 (MQ=255) tttCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCagaaa < 1:3497667/148‑1 (MQ=255) ttCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCagaaag < 1:1006120/148‑1 (MQ=255) tCAAGTATCTCAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATACTCATTCCGCAAACAAGGGTTTACCTCCAAATCagaaaga < 2:1511154/148‑1 (MQ=255) cAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGCTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCagaaagaa > 1:4677165/1‑148 (MQ=255) aaGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAaagaag < 2:4663622/148‑1 (MQ=255) aaGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAaagaag < 2:1933519/148‑1 (MQ=255) aaGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAaagaag < 2:717263/148‑1 (MQ=255) gTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAgaagaa > 2:4481700/1‑148 (MQ=255) tATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGaaa < 2:160707/148‑1 (MQ=255) tATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGaaa > 2:17725/1‑148 (MQ=255) tATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGaaa > 2:3252375/1‑148 (MQ=255) cTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAatt < 2:233000/148‑1 (MQ=255) cTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAatt < 1:770947/148‑1 (MQ=255) cTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAatt < 2:3855502/148‑1 (MQ=255) cTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAatt < 2:372271/148‑1 (MQ=255) ttAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAatta < 1:3721785/148‑1 (MQ=255) ttAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAatta < 1:3306675/148‑1 (MQ=255) ttAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAAGGGTTTAACTCCAAATCAGAAAGAAGAAAatta > 2:3030671/1‑148 (MQ=255) aacatcGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTAttt > 2:1871846/1‑148 (MQ=255) | GGATCAAGGAAGCCAATTTAAATCAGCTTCCTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCCTATGATAATGCCGTCACTGATGTCTTTTTCAAGTATCTTAAACAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCCGCCAACAATGGTTTAACTCCAAATTAGAAAGAAGAAAATTATTT > CP043523/1883693‑1883971 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |