Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0435231,895,0030AT63.1% 759.6 / inf 1840S41S (TCA→TCT) FTN78_chr1944Mobile element protein
Reads supporting (aligned to +/- strand):  ref base A (332/346);  new base T (546/612);  total (881/959)
Fisher's exact test for biased strand distribution p-value = 4.68e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 1841 total aligned reads displayed.

AGCGCACGACTTATATGACTTATAATAGCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGTGAAACACTTAAAGCTAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGT  >  CP043523/1894867‑1895150
                                                                                                                                        |                                                                                                                                                   
 gctcACGACTTATATGACTTATAATAGCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGtt                                                                                                                                         <  2:376328/145‑1 (MQ=11)
  cgcACGACTTATATGACTTATAATAGCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGtga                                                                                                                                        >  2:517030/1‑146 (MQ=11)
  cgcACGACTTATATGACTTATAATAGCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGtga                                                                                                                                        <  2:4008864/148‑3 (MQ=11)
    cACGACTTATATGACTTATAATAGCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGtgatt                                                                                                                                      <  1:3553815/148‑5 (MQ=2)
     aCGACTTATATGACTTATAATAGCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCg                                                                                                                                     <  2:4080501/148‑1 (MQ=11)
      cGACCTATATGACTTATAATAGCACGCTTACAAAAGTTTTTGTTTATTTACTGACAAGCATTGAAGCGATTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGtgattac                                                                                                                                    <  1:4613108/148‑7 (MQ=1)
        aCTTATATGACTTATAATAGCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCtt                                                                                                                                  <  1:993994/148‑1 (MQ=11)
           tataTGACTTATAATAGCACGCTTACAAAAGTTTTTGTTTATTTACTGACAAGCATTGAAGCGATTTATCAAAAGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTACATCTTGCAACATCTGACTGTTTAGTGATTACTTGtt                                                                                                                               >  1:1570166/1‑148 (MQ=11)
           tataTGACTTATAATAGCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGtt                                                                                                                               <  2:4244019/148‑1 (MQ=11)
            atatGACTTATAATAGCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTa                                                                                                                              >  2:3156165/1‑148 (MQ=255)
            atatGACTTATAATAGCACACTCCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACGCTTTATCAAACGAGGGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGGTTGCTTAGTTATCGCTTGTTa                                                                                                                              <  1:1075387/148‑1 (MQ=255)
                gACTTATAATAGCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTa                                                                                                                          <  2:2826882/148‑1 (MQ=11)
                 aCTTATAATAGCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACGCTTTATCAAACGAGGGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGGTTGCTTAGTTATCGCTTGTTACCtct                                                                                                                         >  1:1527018/1‑146 (MQ=9)
                  cTTATAATAGCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATg                                                                                                                        >  1:4681979/1‑148 (MQ=11)
                  cTTATAATAGCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATg                                                                                                                        <  1:3935514/148‑1 (MQ=11)
                  cTTATAATAGCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATg                                                                                                                        <  2:4141603/148‑1 (MQ=11)
                  cTTATAATAGCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATg                                                                                                                        <  1:4101340/148‑1 (MQ=11)
                   ttATAATAGCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATgg                                                                                                                       <  1:131961/148‑1 (MQ=11)
                    tataATAGCACGCTTACAAAAGTTTTTGTTTATTTACTGACAAGCATTGAAGCGATTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTggg                                                                                                                      >  2:4309243/1‑148 (MQ=11)
                       aataGCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCg                                                                                                                   >  1:2683064/1‑148 (MQ=11)
                          aGCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTAc                                                                                                                <  2:228418/148‑1 (MQ=255)
                           gCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACt                                                                                                               >  1:722159/1‑148 (MQ=11)
                            cacaCTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACta                                                                                                              >  2:2195792/1‑147 (MQ=11)
                               acTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCAt                                                                                                           <  2:1298462/148‑1 (MQ=11)
                                 ttacAAAAGTTTTTGTTTATTTACTGACAAGCATTGAAGCGATTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCAttt                                                                                                         <  2:606681/145‑1 (MQ=11)
                                    cAAAAGTTTTTGTTTATTTACTGACAAGCATTGAAGCGATTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCATTTTAg                                                                                                      >  2:3414432/1‑148 (MQ=11)
                                    cAAAAGTTTTTGTTTATTTACTGACAAGCATTGAAGCGATTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCATTTTAg                                                                                                      <  2:1581237/148‑1 (MQ=11)
                                    cAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAg                                                                                                      <  2:3947219/148‑1 (MQ=11)
                                     aaaaGTTTTTGTTTATTTACTGACAACCATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGt                                                                                                     >  1:3087273/1‑148 (MQ=11)
                                     aaaaGTTTTTGTTTATTTACTGACAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGt                                                                                                     <  2:451192/148‑1 (MQ=11)
                                      aaaGTTTTTGTTTATTTACTGACAAGCATTGAAGCGATTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCATTTTAGTg                                                                                                    <  2:168178/148‑1 (MQ=11)
                                       aaGTTTTTGTTTATTTACTGACAAGCATTGAAGCGATTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGa                                                                                                   >  2:2081426/1‑148 (MQ=11)
                                            tttGTTTATTTACTGACAAGCATTGAAGCGATTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCATTTTAGTGAAacac                                                                                              >  2:4591589/1‑148 (MQ=11)
                                            tttGTTTATTTACTGACAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAacac                                                                                              <  1:4293815/148‑1 (MQ=11)
                                             ttGTTTATTTACTGACAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACt                                                                                             >  1:373864/1‑148 (MQ=11)
                                                tttatttaCTGACAAGCATTGAAGCGATTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCATTTTAGTGAAACACTTaa                                                                                          >  2:250506/1‑148 (MQ=11)
                                                tttatttaCTGACAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTaa                                                                                          >  1:1408741/1‑148 (MQ=11)
                                                  tatttaCTGACAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAg                                                                                        >  2:4472298/1‑148 (MQ=11)
                                                   atttaCTGACAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGc                                                                                       <  1:2275035/148‑1 (MQ=11)
                                                    tttaCTGACAACCATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCATTTTAGTGAAACACTTAAAGca                                                                                      >  2:1807019/1‑147 (MQ=11)
                                                    tttaCTGACAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGca                                                                                      >  2:932404/1‑147 (MQ=11)
                                                      taCTGACAAGCATTGAAGCGATTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCATTTTAGTGAAACACTTAAAGcaaa                                                                                    >  2:2995449/1‑145 (MQ=11)
                                                       aCTGACAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAg                                                                                   >  2:2891548/1‑148 (MQ=11)
                                                            cAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCa                                                                              >  2:329917/1‑148 (MQ=11)
                                                            cAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCa                                                                              >  1:627682/1‑148 (MQ=11)
                                                             aaCCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCaa                                                                             <  2:3645932/148‑1 (MQ=11)
                                                               ccATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGTGAAACGCTTAAAGCTAAGCACCAAtt                                                                           >  1:3383562/1‑148 (MQ=11)
                                                                  ttGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGc                                                                        >  1:198090/1‑148 (MQ=11)
                                                                   tGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCt                                                                       <  1:1167943/148‑1 (MQ=11)
                                                                   tGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCt                                                                       >  2:10968/1‑148 (MQ=14)
                                                                   tGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCt                                                                       <  2:2685253/148‑1 (MQ=14)
                                                                    gagaCGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTc                                                                      <  2:3518930/148‑1 (MQ=11)
                                                                    gagaCGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTc                                                                      <  1:163789/148‑1 (MQ=11)
                                                                    gagaCGCTTTATCAAACGAGGGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTc                                                                      <  2:1364408/148‑1 (MQ=11)
                                                                     aagcgatttATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCa                                                                     <  1:2512065/142‑1 (MQ=14)
                                                                      gaCGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCaa                                                                    <  1:2118330/148‑1 (MQ=11)
                                                                       gcgatttATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCaaa                                                                   >  1:3271420/5‑148 (MQ=14)
                                                                        cGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAg                                                                  <  1:4443779/148‑1 (MQ=11)
                                                                           tttATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGttt                                                               >  1:3631251/1‑148 (MQ=11)
                                                                           tttATCAAACGAGGGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGttt                                                               <  2:4698455/148‑1 (MQ=12)
                                                                            ttATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGtcta                                                              >  1:546335/1‑145 (MQ=14)
                                                                             tATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTat                                                             <  1:2964857/148‑1 (MQ=11)
                                                                             tATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTat                                                             <  2:3069306/148‑1 (MQ=14)
                                                                              aTCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTatt                                                            <  1:3452000/148‑1 (MQ=14)
                                                                               tCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCAGCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTattt                                                           <  1:4205370/148‑1 (MQ=11)
                                                                                cAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTatttc                                                          <  2:3216741/148‑1 (MQ=11)
                                                                                cAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTatttc                                                          <  2:1039914/148‑1 (MQ=11)
                                                                                 aaaCGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTatttcc                                                         <  1:2419517/148‑1 (MQ=11)
                                                                                  aaCGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTattccct                                                        >  2:1465012/1‑148 (MQ=14)
                                                                                   aCGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTatttccta                                                       >  2:2423619/1‑148 (MQ=14)
                                                                                   aCGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTatttccta                                                       <  1:234614/148‑1 (MQ=11)
                                                                                   aCGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTatttccta                                                       >  2:1901852/1‑148 (MQ=14)
                                                                                    cGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTatttcctaa                                                      <  1:261539/148‑1 (MQ=11)
                                                                                    cGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTatttcctaa                                                      >  1:3190605/1‑148 (MQ=14)
                                                                                       gtgtTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTatttcctaattt                                                   >  1:2885218/1‑148 (MQ=14)
                                                                                         gtTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTatttcctaatttcc                                                 <  2:3351424/148‑1 (MQ=14)
                                                                                           tCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTatttcctaatttccta                                               >  1:1769643/1‑148 (MQ=11)
                                                                                             cccTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGa                                             <  1:3807255/148‑1 (MQ=11)
                                                                                             cccTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGa                                             <  2:4408937/148‑1 (MQ=11)
                                                                                              ccTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGaa                                            <  1:1719786/148‑1 (MQ=11)
                                                                                              ccTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGaa                                            <  1:123999/148‑1 (MQ=11)
                                                                                              ccTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTGACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGaa                                            >  1:802594/1‑148 (MQ=11)
                                                                                               cTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAat                                           <  2:2353928/148‑1 (MQ=11)
                                                                                                ttGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAata                                          <  1:90362/148‑1 (MQ=11)
                                                                                                ttGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAata                                          >  2:1208014/1‑148 (MQ=11)
                                                                                                 tGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAatat                                         <  1:2827346/148‑1 (MQ=11)
                                                                                                  gAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATAtt                                        <  2:3867219/148‑1 (MQ=11)
                                                                                                   aGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATtc                                       <  1:30309/148‑1 (MQ=11)
                                                                                                        cAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCt                                  <  1:217328/148‑1 (MQ=11)
                                                                                                           aaCCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTg                               >  1:4372845/1‑148 (MQ=11)
                                                                                                           aaCCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTg                               >  1:452769/1‑148 (MQ=11)
                                                                                                            aCCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGt                              >  2:258392/1‑148 (MQ=11)
                                                                                                                  aGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTccgccg                        <  2:2013025/148‑1 (MQ=11)
                                                                                                                   gAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGt                       <  1:1002914/148‑1 (MQ=11)
                                                                                                                    aaCGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGtt                      <  1:3978795/148‑1 (MQ=11)
                                                                                                                          cATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGGCTATTCCCTAATTTCCTAGAATATTCTCGCTTTGTTCATCGTTGTAATg                <  1:1879160/148‑1 (MQ=11)
                                                                                                                            tcttgCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATATTCTCGCTTTGTTCATCGTTGTAATGca              <  2:758151/144‑2 (MQ=2)
                                                                                                                                gCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATATTCTCGCTTTGTTCATCGTTGTAATGCCctct          >  2:819239/1‑148 (MQ=11)
                                                                                                                                 cAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCtt         <  2:2760925/148‑1 (MQ=11)
                                                                                                                                   aCATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACATTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTAc       >  1:2766362/1‑148 (MQ=11)
                                                                                                                                        |                                                                                                                                                   
AGCGCACGACTTATATGACTTATAATAGCACACTTCCAAAAGTTTTTGTTTATTTACTGACAACCATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTAGTGAAACACTTAAAGCTAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGT  >  CP043523/1894867‑1895150

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑