Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0435231,895,0660TA73.1% 1335.0 / inf 1236A62A (GCT→GCA) FTN78_chr1944Mobile element protein
Reads supporting (aligned to +/- strand):  ref base T (138/195);  new base A (453/450);  total (591/645)
Fisher's exact test for biased strand distribution p-value = 7.01e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.60e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 1271 total aligned reads displayed.

TACTGACAACCATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCTAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAATGAGTGTATCCATT  >  CP043523/1894921‑1895210
                                                                                                                                                  |                                                                                                                                                
taCTGACAAGCATTGAAGCGATTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCaaa                                                                                                                                                <  1:1135045/148‑1 (MQ=11)
taCTGACAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCaaa                                                                                                                                                <  1:2700016/148‑1 (MQ=11)
 aCTGACAAGCATTGAAGCGATTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAg                                                                                                                                               <  2:2481540/148‑1 (MQ=11)
 aCTGACAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAg                                                                                                                                               >  1:4614731/1‑148 (MQ=11)
  cTGACAAGCATTGAAGCGATTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTaaagcaaagc                                                                                                                                              <  2:1089197/148‑1 (MQ=11)
   tGACAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAaagcaaagca                                                                                                                                             <  1:3561367/148‑1 (MQ=11)
      cAACCATTGAGACACTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCa                                                                                                                                          >  2:329917/1‑148 (MQ=11)
         ccATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAAtt                                                                                                                                       >  1:3383562/1‑148 (MQ=11)
         ccATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAAtt                                                                                                                                       >  1:4223499/1‑148 (MQ=11)
           aTTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTgg                                                                                                                                     <  1:3039103/148‑1 (MQ=11)
           aTTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTgg                                                                                                                                     <  2:4028364/148‑1 (MQ=11)
            ttGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGc                                                                                                                                    >  2:1212144/1‑148 (MQ=11)
            ttGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGc                                                                                                                                    >  1:198090/1‑148 (MQ=11)
             tGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCt                                                                                                                                   >  2:774580/1‑148 (MQ=11)
              gagaCGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTc                                                                                                                                  <  2:2802963/148‑1 (MQ=11)
              gagaCGCTTTATCAAACGAGGGTTCCCCTTGAGGTTCAAAACCGATAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTc                                                                                                                                  <  2:1361906/148‑1 (MQ=11)
               agaCGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCa                                                                                                                                 >  2:67064/1‑148 (MQ=11)
               agaCGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCa                                                                                                                                 >  1:2793898/1‑148 (MQ=11)
               aagcgatttATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCa                                                                                                                                 <  1:2512065/142‑1 (MQ=14)
                agcgatttATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCaa                                                                                                                                <  2:2856950/143‑1 (MQ=11)
                 gcgatttATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCaaa                                                                                                                               >  1:3271420/5‑148 (MQ=14)
                  cGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAg                                                                                                                              <  2:1284508/148‑1 (MQ=11)
                  cGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAg                                                                                                                              >  2:2078774/1‑148 (MQ=11)
                  cGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAg                                                                                                                              >  1:3193895/1‑148 (MQ=11)
                   gCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGt                                                                                                                             >  2:945504/1‑148 (MQ=11)
                    cTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGtt                                                                                                                            >  1:548835/1‑148 (MQ=11)
                    cTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGtt                                                                                                                            >  2:2236680/1‑148 (MQ=11)
                    cTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGtt                                                                                                                            <  2:3246401/148‑1 (MQ=14)
                     tttATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGttt                                                                                                                           <  1:2252536/148‑1 (MQ=11)
                      ttATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTa                                                                                                                          >  2:155612/1‑148 (MQ=11)
                      ttATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTa                                                                                                                          >  1:1591363/1‑148 (MQ=11)
                       tATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCATTTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTa                                                                                                                          <  2:1839097/148‑1 (MQ=11)
                       tATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTat                                                                                                                         >  1:1276039/1‑148 (MQ=11)
                         tCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTattt                                                                                                                       <  1:3777681/148‑1 (MQ=11)
                         tCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTattt                                                                                                                       <  1:3850966/148‑1 (MQ=11)
                          cAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTatttc                                                                                                                      >  1:704513/1‑148 (MQ=14)
                            aaCGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTatttcct                                                                                                                    >  1:1210421/1‑148 (MQ=11)
                             aCGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTatttccta                                                                                                                   <  1:37210/148‑1 (MQ=11)
                             aCGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTattcccta                                                                                                                   <  2:2172604/148‑1 (MQ=14)
                             aCGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTatttccta                                                                                                                   <  1:234614/148‑1 (MQ=11)
                             aCGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTatttccta                                                                                                                   >  2:867181/1‑148 (MQ=14)
                             aCGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTatttccta                                                                                                                   >  1:1465099/1‑148 (MQ=14)
                               gAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTatttcctaat                                                                                                                 <  1:4442206/148‑1 (MQ=11)
                               gAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTattccctaat                                                                                                                 <  1:3976446/148‑1 (MQ=14)
                                 gtgtTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTatttcctaattt                                                                                                               >  2:52271/1‑148 (MQ=11)
                                 gtgtTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTattccctaattt                                                                                                               >  2:1919086/1‑148 (MQ=11)
                                  tgtTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTatttcctaatttc                                                                                                              >  2:413265/1‑148 (MQ=11)
                                     tCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTatttcctaatttccta                                                                                                           >  1:1769643/1‑148 (MQ=11)
                                     tCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTattccctaatttccta                                                                                                           <  1:1385728/148‑1 (MQ=11)
                                      ccccTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAg                                                                                                          >  2:2659568/1‑148 (MQ=11)
                                      ccccTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAg                                                                                                          <  1:1874643/148‑1 (MQ=11)
                                        ccTTGAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGaa                                                                                                        >  2:4710990/1‑148 (MQ=11)
                                        ccTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTGACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGaa                                                                                                        >  1:802594/1‑148 (MQ=11)
                                            gaagTTCAAAACCGAAAGAACGTCCATCTTTCAACATCTTACTGTTTAGTTATCGCTTGTTACCTATGGTGCGTACTGCA‑TTTTAGTGAAACTCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTATAATAtt                                                                                                    <  2:3749748/145‑1 (MQ=11)
                                            gAGGTTCAAAACCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATAtt                                                                                                    >  2:2410360/1‑148 (MQ=11)
                                             aGGTTCAAATCCGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATATtc                                                                                                   <  2:3559527/148‑1 (MQ=11)
                                              ggTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATATtct                                                                                                  <  2:4254168/148‑1 (MQ=11)
                                                  cAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCt                                                                                              <  1:217328/148‑1 (MQ=11)
                                                  cAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCt                                                                                              >  2:3351921/1‑148 (MQ=11)
                                                   aaaaCCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCtt                                                                                             <  2:4505029/148‑1 (MQ=11)
                                                     aaCCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTg                                                                                           >  1:452769/1‑148 (MQ=11)
                                                       ccGAAAGAACGTCCATCTTGCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTc                                                                                         <  2:3014438/148‑1 (MQ=11)
                                                           aaGAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTccgcc                                                                                     >  2:3162288/1‑148 (MQ=11)
                                                             gAACGTCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGt                                                                                   <  1:1002914/148‑1 (MQ=11)
                                                                  tCCATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTaa                                                                              >  2:2333961/1‑148 (MQ=11)
                                                                   ccATCTCGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAAt                                                                             >  2:3880232/1‑148 (MQ=11)
                                                                       ctcGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGccc                                                                         >  1:300135/1‑148 (MQ=11)
                                                                        ttgCAACATCTGACTGTTTAGTGATTACTTGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATATTCTCGCTTTGTTCATCGTTGTAATGcact                                                                        >  1:2842193/3‑145 (MQ=2)
                                                                        tcGCAACATCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCct                                                                        >  2:4352107/1‑148 (MQ=11)
                                                                                tCAGATTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGa                                                                <  1:4367790/148‑1 (MQ=11)
                                                                                    aTTGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTAt                                                            <  1:4082285/148‑1 (MQ=11)
                                                                                      tgtttAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACGCTTAAAGCTAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATcc                                                          >  2:1037534/4‑148 (MQ=1)
                                                                                      tGCTTAGTGATTACTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATcc                                                          >  1:883303/1‑148 (MQ=11)
                                                                                                ttacTTGTTACCTATGGGGCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCg                                                >  2:34087/4‑148 (MQ=255)
                                                                                                 tacTTGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATATTCTCGCTTTGTTCATCGTTGTAATGCACTCCTACTGAGTATTCAACTCATTCGc                                               >  2:1750522/3‑148 (MQ=11)
                                                                                                     tattACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATATTCTCGCTTTGTTCATCGTTGTAATGCACTCCTACTGAGTATTCAACTCATTCGCCAAg                                           <  1:3446461/146‑1 (MQ=11)
                                                                                                     tGTTACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATATTCTCGCTTTGTTCATCGTTGTAATGCACTCCTACTGAGTATTCAACTCATTCGCCAAg                                           <  1:2113509/148‑1 (MQ=11)
                                                                                                       ttACCTGTGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATATTCTCGCTTTGTTCATCGTTGTAATGCACTCCTACTGAGTATTCAACTCATTCGCCAAGct                                         <  2:2958777/148‑2 (MQ=11)
                                                                                                               ggggCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATATTCTCGCTTTGTTCATCGTTGTAATGCACTCCTACTGAGTATTCAACTCATTCGCCAAGCTCTCGTCtt                                 >  2:2567268/1‑148 (MQ=11)
                                                                                                               ggggCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCtt                                 <  2:3082879/148‑1 (MQ=17)
                                                                                                                gggCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCttt                                <  1:1073216/148‑1 (MQ=17)
                                                                                                                gggCGTACTACA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCttt                                <  2:4445457/148‑1 (MQ=17)
                                                                                                                 ggCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATATTCTCGCTTTGTTCATCGTTGTAATGCACTCCTACTGAGTATTCAACTCATTCGCCAAGCTCTCGTCTTTa                               >  2:1471713/1‑148 (MQ=11)
                                                                                                                  gCGTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATATTCTCGCTTTGTTCATCGTTGTAATGCACTCCTACTGAGTATTCAACTCATTCGCCAAGCTCTCGTCTTTaa                              >  2:271115/1‑148 (MQ=11)
                                                                                                                    gTACTGCA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATATTCTCGCTTTGTTCATCGTTGTAATGCACTCCTACTGAGTATTCAACTCATTCGCCAAGCTCTCGTCTTTAAag                            <  1:2655322/148‑1 (MQ=11)
                                                                                                                       ctacA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAgg                         >  1:2416802/4‑148 (MQ=17)
                                                                                                                        tacA‑TTTTAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCCAGCACTCGTCTTTAAAGAGGt                        >  2:3663087/3‑148 (MQ=12)
                                                                                                                               ttAGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAgg                  <  1:2579557/148‑1 (MQ=17)
                                                                                                                                 aGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATATTCTCGCTTTGTTCATCGTTGTAATGCACTCCTACTGAGTATTCAACTCATTCGCCAAGCTCTCGTCTTTAAAGAAGTTGAAggga                <  2:2007250/148‑3 (MQ=11)
                                                                                                                                 aGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATATTCTCGCTTTGTTCATCGTTGTAATGCACTCCTACTGAGTATTCAACTCATTCGCCAAGCTCTCGTCTTTAAAGAAGTTGAAggga                >  1:1689483/1‑146 (MQ=11)
                                                                                                                                   tGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtg              <  1:4306888‑M1/148‑3 (MQ=255)
                                                                                                                                   tGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtg              <  2:456691‑M1/148‑3 (MQ=255)
                                                                                                                                      aaCACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagt           <  1:3631055‑M1/148‑6 (MQ=255)
                                                                                                                                      aaCACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagt           >  1:4711483‑M1/1‑143 (MQ=255)
                                                                                                                                       actcttaACGCTAAGCACCAACTTGCTCAAAGTTTATTTCCTAATTTCCTAGAATAGTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAttagtg          <  1:2911677‑M1/145‑7 (MQ=255)
                                                                                                                                       acacTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtg          <  2:3479900‑M1/148‑7 (MQ=255)
                                                                                                                                        cacTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtga         <  1:961569‑M1/148‑8 (MQ=255)
                                                                                                                                            tAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtga     <  1:3107654‑M1/148‑12 (MQ=255)
                                                                                                                                            tAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtga     >  2:580942‑M1/1‑137 (MQ=255)
                                                                                                                                               aGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtg  >  2:1632371‑M1/1‑134 (MQ=255)
                                                                                                                                                  |                                                                                                                                                
TACTGACAACCATTGAGACGCTTTATCAAACGAGTGTTCCCCTTGAGGTTCAAAACCGAAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTTATCGCTTGTTACCTATGGGGCGTACTGCA‑TTTTAGTGAAACACTTAAAGCTAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAATGAGTGTATCCATT  >  CP043523/1894921‑1895210

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑