BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP043523	1,848,210	A→G	intergenic (+195/‑82)	FTN78_chr1897 → / → FTN78_chr1898	Cold shock protein of CSP family/Cold shock protein of CSP family

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP043523	1,848,210	0	A	G	100.0%	743.8 / NA	341	intergenic (+195/‑82)	FTN78_chr1897/FTN78_chr1898	Cold shock protein of CSP family/Cold shock protein of CSP family
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (213/128); total (213/128)

Only 100 of 341 total aligned reads displayed.

AAAATGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCTTTCCCTACAGTTCATAAAATCCATGTCATTACGATATGGATTTTATTAAT‑GGAGAGTAGTTTGACATTGACTATAATTAGTGTTATTATGAAGAAGTAAATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATGAGATTTACAATTTTGTCGAAAGGAAATAA‑‑A‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCACTT  >  CP043523/1848066‑1848349

  aaTGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCTTTCCCTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGAttt                                                                                                                                             >  1:373258/1‑148 (MQ=25)

    tGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCTTTCCCTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTg                                                                                                                                           <  1:1397924/148‑1 (MQ=25)

     gAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCTTTCCCTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGt                                                                                                                                          >  1:3057057/1‑148 (MQ=25)

        ttAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCTTTCCCTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCAt                                                                                                                                       >  1:1057137/1‑148 (MQ=25)

          aaaaTGTTATACTGAGTGAGGGAAAGATTAGTTGCTTTCCCTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGa                                                                                                                                     <  1:1182141/148‑1 (MQ=25)

                ttATACTGAGTGAGGGAAAGATTAGTTGCTTTCCCTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTaaaa                                                                                                                               >  1:364274/1‑148 (MQ=21)

                ttATACTGAGTGAGGGAAAGATTAGTTGCTTTCCCTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTaaaa                                                                                                                               <  1:2720944/148‑1 (MQ=21)

                        agtgagGGAAAGATTAGTTGCTTTCCCTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTtat                                                                                                                       >  1:1891042/1‑148 (MQ=21)

                         gtgagGGAAAGATTAGTTGCTTTCCCTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTtata                                                                                                                      >  1:1332201/1‑148 (MQ=21)

                                aaaGATTAGTTGCTTTCCCTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCAc                                                                                                               >  2:636362/1‑148 (MQ=18)

                                aaaGATTAGTTGCTTTCCCTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCAc                                                                                                               <  1:2825681/148‑1 (MQ=18)

                                  aGATTAGTTGCTTTCCTTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACtt                                                                                                             >  2:519361/1‑148 (MQ=18)

                                   gATTAGTTGCTTTCCCTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACttt                                                                                                            >  1:4676183/1‑148 (MQ=18)

                                   gATTAGTTGCTTTCCCTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACttt                                                                                                            >  1:982997/1‑148 (MQ=18)

                                         ttGCTTTCCCTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCaa                                                                                                      >  1:3159723/1‑148 (MQ=18)

                                            cTTTCCCTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAAt                                                                                                   >  2:568351/1‑148 (MQ=18)

                                                ccttACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATaaga                                                                                               <  2:3430898/145‑1 (MQ=18)

                                                cccTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATaaga                                                                                               >  1:2115045/1‑148 (MQ=18)

                                                cccTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATaaga                                                                                               >  2:1446131/1‑148 (MQ=18)

                                                cccTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATaaga                                                                                               <  2:3201303/148‑1 (MQ=18)

                                                 ccTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGAt                                                                                              <  1:2306072/148‑1 (MQ=18)

                                                 ccTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGAt                                                                                              >  1:1452539/1‑148 (MQ=18)

                                                 ccTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGAt                                                                                              >  2:2208805/1‑148 (MQ=18)

                                                  cTACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGAtt                                                                                             >  1:1642850/1‑148 (MQ=18)

                                                   tACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGAttt                                                                                            <  1:2408531/148‑1 (MQ=18)

                                                   tACAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGAttt                                                                                            >  2:2070860/1‑148 (MQ=18)

                                                     cAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTAc                                                                                          <  2:4290176/148‑1 (MQ=18)

                                                     cAGTTCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTACTATGAGAAAGTAGATTTTGTCATGAGTAAAATGTTTTATCGATTCACTTTTCGCAAAATGAGATTTAc                                                                                          >  2:3076796/1‑148 (MQ=11)

                                                        ttCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAAt                                                                                       >  2:2076466/1‑148 (MQ=18)

                                                         tCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAAtt                                                                                      <  2:3048825/148‑1 (MQ=18)

                                                         tCATAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAAtt                                                                                      >  1:2052997/1‑148 (MQ=18)

                                                            tAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTg                                                                                   <  2:1637442/148‑1 (MQ=18)

                                                            tAAAATCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTg                                                                                   <  1:337732/148‑1 (MQ=18)

                                                             aaaaTCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGt                                                                                  >  1:2535275/1‑148 (MQ=18)

                                                              aaaTCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTc                                                                                 <  2:3961567/148‑1 (MQ=18)

                                                                aTCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGa                                                                               >  2:3506292/1‑148 (MQ=18)

                                                                aTCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGa                                                                               <  2:2283138/148‑1 (MQ=18)

                                                                 tCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGaa                                                                              >  2:664035/1‑148 (MQ=17)

                                                                 tCCATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACCTTTCGCAAAATCAGATTTACCATTTTGTCGaa                                                                              >  2:4099473/1‑148 (MQ=17)

                                                                   cATGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTGTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAg                                                                            >  2:1768453/1‑148 (MQ=17)

                                                                    aTGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAgg                                                                           <  2:1366338/148‑1 (MQ=17)

                                                                    aTGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAgg                                                                           <  2:1699830/148‑1 (MQ=17)

                                                                     tGTCACTACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGa                                                                          >  2:124690/1‑148 (MQ=17)

                                                                       tcactACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGaaa                                                                        >  1:4639703/5‑148 (MQ=17)

                                                                        cactACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAATTAAGATTTACAATTTTGTCGAAAGGaaat                                                                       >  2:4242574/4‑148 (MQ=17)

                                                                        cactACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGaaat                                                                       <  2:794465/145‑1 (MQ=17)

                                                                           tACGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGaaataa‑‑a                                                                  >  1:4351274/1‑148 (MQ=17)

                                                                            aCGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGaaataa‑‑a‑‑t                                                               >  1:1530344/1‑148 (MQ=17)

                                                                            aCGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGaaataa‑‑a‑‑t                                                               >  2:1408595/1‑148 (MQ=17)

                                                                            aCGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGaaataa‑‑a‑‑t                                                               <  2:468085/148‑1 (MQ=17)

                                                                             cGATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAaataa‑‑a‑‑ta                                                              >  2:3330441/1‑148 (MQ=17)

                                                                              gATATGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAA‑‑a‑‑tat                                                             >  1:645143/1‑148 (MQ=17)

                                                                                  tGGATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAA‑‑a‑‑tatatta                                                         >  1:2493628/1‑144 (MQ=14)

                                                                                   ggATTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAA‑‑a‑‑tatattat                                                        >  2:4502508/1‑143 (MQ=14)

                                                                                     aTTTTATTAATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAA‑‑a‑‑tatattatgg                                                      <  2:1548380/148‑8 (MQ=14)

                                                                                        ttattaATCAGAGAGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCaa                                                     <  2:2963251/148‑1 (MQ=14)

                                                                                            taatcagagaGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATgg                                                 >  2:3739465/7‑148 (MQ=14)

                                                                                             aatcagagaGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGa                                                <  1:2070860/143‑1 (MQ=14)

                                                                                             aatcagagaGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGa                                                <  2:2477167/143‑1 (MQ=14)

                                                                                             aatcagagaGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGa                                                >  1:109000/6‑148 (MQ=14)

                                                                                               tcagagaGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGTAAc                                              >  2:181504/4‑148 (MQ=14)

                                                                                                  gagaGTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGt                                           >  2:873850/1‑148 (MQ=14)

                                                                                                   agagTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTa                                          >  2:4535993/1‑148 (MQ=14)

                                                                                                    gagTAGTTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTaa                                         >  2:1136355/1‑148 (MQ=11)

                                                                                                        agtTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATg                                     <  2:87161/148‑1 (MQ=11)

                                                                                                         gtTTGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATgg                                    >  1:4332581/1‑148 (MQ=11)

                                                                                                          tttGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGt                                   >  1:2470363/1‑148 (MQ=11)

                                                                                                          tttGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGt                                   >  1:3411499/1‑148 (MQ=11)

                                                                                                          tttGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGt                                   >  2:2786747/1‑148 (MQ=11)

                                                                                                           ttGACATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGtt                                  <  2:1900866/148‑1 (MQ=11)

                                                                                                               cATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAAc                              >  2:1314774/1‑148 (MQ=11)

                                                                                                               cATTGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGGAAAATGGTTTAAc                              >  1:4120615/1‑148 (MQ=11)

                                                                                                                 ttGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGc                            >  2:157253/1‑148 (MQ=11)

                                                                                                                  tgagtataATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGct                           <  2:3772049/144‑2 (MQ=11)

                                                                                                                  tGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGct                           <  2:1987001/148‑2 (MQ=11)

                                                                                                                  tGAGTATAATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGct                           <  2:4618065/148‑2 (MQ=11)

                                                                                                                   gagtataATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGcta                          >  1:750742/4‑146 (MQ=11)

                                                                                                                    agtataATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGctac                         >  1:2202260/3‑145 (MQ=11)

                                                                                                                     gtataATGAGTATTATGATAAAGAAGAAGATTTTGTCATGAGTAAAATCTTTTATAGAATCACTTTTCGCAAAATAAGATTTAACAATTTGTCGAAAGGAAATAA‑‑ATCTATAATAGCGAATGGAACCGTAAACTGGTTTAACGctact                        <  2:2656327/147‑5 (MQ=2)

                                                                                                                      tataATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGctacta                       <  2:2722177/148‑6 (MQ=11)

                                                                                                                       ataATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGctactaa                      >  2:1711212/1‑142 (MQ=14)

                                                                                                                       ataATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGctactaa                      <  2:2844748/148‑7 (MQ=14)

                                                                                                                        taATTAGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGctactaaa                     >  2:2939549/1‑141 (MQ=14)

                                                                                                                             aGTGTTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCTACTAAAGGAtt                >  1:2439640/1‑148 (MQ=11)

                                                                                                                              gtgtTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCTACTAAAGGAttt               >  1:3975036/1‑148 (MQ=11)

                                                                                                                               tgtTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCTACTAAAGGATTTg              <  1:846853/148‑1 (MQ=11)

                                                                                                                               tgtTATTATAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCTACTAAAGGATTTg              <  2:35883/148‑1 (MQ=11)

                                                                                                                                 ttattaTAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCTACTAAAGGATTTggt            <  2:2115304/148‑2 (MQ=11)

                                                                                                                                  tattatAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCTACTAAAGGATTTggtt           <  2:2749257/148‑3 (MQ=11)

                                                                                                                                   attatAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCTACTAAAGGATTTGGttt          <  2:4431737/148‑1 (MQ=11)

                                                                                                                                   attatAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCTACTAAAGGATTTGGttt          >  1:533871/1‑148 (MQ=11)

                                                                                                                                    ttatAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCTACTAAAGGATTTGGtttt         <  1:4257867/148‑1 (MQ=11)

                                                                                                                                    ttatAAAGAAGTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCTACTAAAGGATTTGGtttt         >  2:3992256/1‑148 (MQ=11)

                                                                                                                                      ataaagaagTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCTACTAAAGGATTTGGTTTTAt       <  2:3222903/145‑1 (MQ=11)

                                                                                                                                       taaagaagTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCTACTAAAGGATTTGGTTTTAtt      >  1:2948918/3‑147 (MQ=11)

                                                                                                                                        aaagaagTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCTACTAAAGGATTTGGTTTTAtta     >  1:1963178/2‑146 (MQ=11)

                                                                                                                                          agaagTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCTACTAAAGGATTTGGTTTTAttacc   >  2:1780777/1‑144 (MQ=11)

                                                                                                                                           gaagTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCTACTAAAGGATTTGGTTTTAttacct  >  1:3769553/1‑143 (MQ=11)

                                                                                                                                           gaagTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCTACTAAAGGATTTGGTTTTAttacct  >  2:1458896/1‑143 (MQ=11)

                                                                                                                                           gaagTAGATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATAAGATTTACAATTTTGTCGAAAGGAAATAAATA‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCTACTAAAGGATTTGGTTTTAttacct  >  2:3629304/1‑143 (MQ=11)

AAAATGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCTTTCCCTACAGTTCATAAAATCCATGTCATTACGATATGGATTTTATTAAT‑GGAGAGTAGTTTGACATTGACTATAATTAGTGTTATTATGAAGAAGTAAATTTTGTCATGAGTAAAATGTTTTATAGATTCACTTTTCGCAAAATGAGATTTACAATTTTGTCGAAAGGAAATAA‑‑A‑‑TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCACTT  >  CP043523/1848066‑1848349

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`