| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP043523 | 1,884,577 | T→A | S87T (TCA→ACA) | FTN78_chr1930 → | Putative UV‑damage repair protein UvrX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP043523 | 1,884,577 | 0 | T | A | 99.6% | 1724.6 / NA | 512 | S87T (TCA→ACA) | FTN78_chr1930 | Putative UV‑damage repair protein UvrX |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (255/255); minor base G (1/1); total (256/256) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 517 total aligned reads displayed.
TTTAAATCCTCTGACCACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAATCACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTCATTGAATCTTGGGCGAAACGCACGTGGATTGTTCCTCCACAAATGCAGCTCTAT > CP043523/1884432‑1884720 | tAAATCCTCTGACCACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACg < 2:4150825/148‑1 (MQ=255) aaTCCTCTGACCACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGaa > 1:1877733/1‑148 (MQ=255) tctGACCACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTc < 2:3030270/148‑1 (MQ=255) aCCACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAAtt < 2:321673/148‑1 (MQ=255) aCCACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAAtt > 2:1154288/1‑148 (MQ=255) ccACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTa < 2:2998994/148‑1 (MQ=255) cACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTAt > 1:3084150/1‑148 (MQ=255) cACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTAt < 1:591926/148‑1 (MQ=255) cACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTAt > 1:918635/1‑148 (MQ=255) cACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTAt < 1:2100530/148‑1 (MQ=255) cTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATcc > 1:2425656/1‑148 (MQ=255) ttCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCg < 2:2632519/148‑1 (MQ=255) ctctTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCa > 1:1593264/1‑148 (MQ=255) tctTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCaa > 1:3557984/1‑148 (MQ=255) tctTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCaa > 1:2691705/1‑148 (MQ=255) tctTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCaa > 1:3196615/1‑148 (MQ=255) tctTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCaa > 1:2044617/1‑148 (MQ=255) tctTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCaa < 1:1940634/148‑1 (MQ=255) tttGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATg > 2:2954661/1‑148 (MQ=255) tttGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATg > 1:480221/1‑148 (MQ=255) ttGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATgg > 2:629332/1‑148 (MQ=255) ttGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATgg < 2:2814758/148‑1 (MQ=255) tgtgTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGt < 1:4049012/148‑1 (MQ=255) gtgtCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTa > 1:4444381/1‑148 (MQ=255) gtgtCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTa > 1:2201402/1‑148 (MQ=255) gtgtCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTa < 1:53317/148‑1 (MQ=255) gtgtCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTa < 1:1832915/148‑1 (MQ=255) tCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCg > 2:3336057/1‑148 (MQ=255) cATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGa > 2:1116499/1‑148 (MQ=255) aTGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGaa < 2:2066163/148‑1 (MQ=255) gAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAaca < 1:1098744/148‑1 (MQ=255) aGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAacac < 1:346646/148‑1 (MQ=255) aGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAacac > 2:1276732/1‑148 (MQ=255) gTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAAcaca > 1:4157352/1‑148 (MQ=255) tCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACAt < 1:2492482/148‑1 (MQ=255) tCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACAt < 1:730668/148‑1 (MQ=255) tCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACAt > 1:3243045/1‑148 (MQ=255) cGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATa < 1:4335157/148‑1 (MQ=255) gATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACa > 1:864078/1‑148 (MQ=255) tcagacTACAGGGTTATCGCTTGGCTCTAGTCCAACATTTAAACAAGAATATGGTATGAAAATTGTCAGTCATCCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACAtt > 2:4567647/6‑148 (MQ=255) tCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACAtt < 2:761957/148‑1 (MQ=255) tCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACAtt < 1:1744981/148‑1 (MQ=255) tAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGa > 2:3142567/1‑148 (MQ=255) aaGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACa < 2:1661383/148‑1 (MQ=255) ggTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCg > 1:3736267/1‑148 (MQ=255) gcttcaCGCTCGCCTCCAGTCCAACCTTTAAAAAAGTTTTTGGTCTGAAACATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAACGTTCCATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCg < 2:217337/143‑1 (MQ=255) gTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGa > 1:3934946/1‑148 (MQ=255) ttAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGaa > 1:275240/1‑148 (MQ=255) tAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAAc > 1:1650282/1‑148 (MQ=255) aaCGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACt < 2:3776843/148‑1 (MQ=255) aCGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTg > 2:565907/1‑148 (MQ=255) ccTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAAc > 1:1290075/1‑148 (MQ=255) ccTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAAc > 2:4496302/1‑148 (MQ=255) ctctAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACt < 2:1491302/148‑1 (MQ=255) ctAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACttt < 2:2546455/148‑1 (MQ=255) tAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTg > 2:3907401/1‑148 (MQ=255) aGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGc < 2:480251/148‑1 (MQ=255) gTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCa < 1:1549139/148‑1 (MQ=255) gTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCa > 2:2483760/1‑148 (MQ=255) cAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAata > 2:4664043/1‑148 (MQ=255) cAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAata > 2:2128727/1‑148 (MQ=255) aaCCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAatat < 2:4361560/148‑1 (MQ=255) tAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCt < 1:2913013/148‑1 (MQ=255) aaGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCttttat > 1:3500919/1‑145 (MQ=255) gTTTTGGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTg < 1:2593810/148‑1 (MQ=255) tttttGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGa > 1:1444494/1‑148 (MQ=255) ttttGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGag > 1:1353098/1‑147 (MQ=255) ttttGGAATGACAAATGTCGGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGCCATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGag < 2:3836696/148‑2 (MQ=25) tttGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGagt < 2:4437506/148‑3 (MQ=255) gTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTg > 1:3155610/1‑148 (MQ=255) tGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGc < 1:2955663/148‑1 (MQ=255) gAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCg < 2:69462/148‑1 (MQ=255) gAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCg > 1:2309515/1‑148 (MQ=255) aaaaaTGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGa > 2:4525234/1‑148 (MQ=255) aaaaTGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGaa > 2:1808505/1‑148 (MQ=255) aaaaTGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGaa > 1:3604725/1‑148 (MQ=255) aaaaTGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGaa < 2:3459971/148‑1 (MQ=255) aaaaTGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGaa < 2:431205/148‑1 (MQ=255) aTGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACg > 2:4099178/1‑148 (MQ=255) aTGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACg > 1:1204957/1‑148 (MQ=255) tGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGc > 2:85078/1‑148 (MQ=255) tGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGc < 1:1012272/148‑1 (MQ=255) tGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGc > 2:2193506/1‑148 (MQ=255) gTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCa > 2:2040612/1‑148 (MQ=255) gTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCa < 2:3663609/148‑1 (MQ=255) gTCAGTCGTGCCAGCGATGTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGATACGCa < 2:3416039/148‑1 (MQ=37) tCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCAc < 1:4285290/148‑1 (MQ=255) tGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGAtt > 2:3535837/1‑148 (MQ=255) ccAGCCATTGACCTTTACTTATAGAAGCAGGAAACTTCAATTATCCGCAATGGTATCGAACACAGACAGACATTCAGGGACAGGGAACTGAACCAACATTGCAATATGTCGCACTTATTGAGTCTTGGGCGCAACGCACGTGGATTGt > 2:1015550/1‑148 (MQ=255) cAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGtt > 2:2378620/1‑148 (MQ=255) aTTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCTATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTtcctcc < 2:1507882/148‑1 (MQ=255) tACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCctca < 2:2899584/148‑1 (MQ=255) aCCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCaa < 2:2695483/148‑1 (MQ=255) aCCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCaa < 1:3393134/148‑1 (MQ=38) ttttCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATg > 1:845528/1‑148 (MQ=255) cTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGc < 2:1392670/148‑1 (MQ=255) ttATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGct < 1:4113236/148‑1 (MQ=37) tataGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGctc > 1:2659483/1‑148 (MQ=38) ataGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGctct < 2:1905526/148‑1 (MQ=255) ataGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGctct < 1:4541815/148‑1 (MQ=255) | TTTAAATCCTCTGACCACTTCTCTTTGTGTCATGAGTCGAGCAGATCATTCTAAAGGGTTAACGCTTGCCTCTAGTCCAACCTTTAAAAAAGTTTTTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAATCACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTCATTGAATCTTGGGCGAAACGCACGTGGATTGTTCCTCCACAAATGCAGCTCTAT > CP043523/1884432‑1884720 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |