| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP043523 | 1,884,672 | A→G | E118E (GAA→GAG) | FTN78_chr1930 → | Putative UV‑damage repair protein UvrX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP043523 | 1,884,672 | 0 | A | G | 99.8% | 1431.8 / ‑5.2 | 417 | E118E (GAA→GAG) | FTN78_chr1930 | Putative UV‑damage repair protein UvrX |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (207/209); total (208/209) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 | |||||||||||
Only 100 of 417 total aligned reads displayed.
TTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAATCACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTCATT‑GAATCTTGGGCGAAACGCACGTGGATTGTTCCTCCACAAATGCAGCTCTATGTGGACTATAAAATAGAAGTTACGGATATTCTAACCAATTATACATCAATTGATGAAATTCATTCTTACTCGATTGATGAGTCGTTT > CP043523/1884527‑1884807 | ttGGTATTAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTc > 2:1153077/1‑148 (MQ=255) tGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCt > 1:2454851/1‑148 (MQ=255) gTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTg > 2:643073/1‑148 (MQ=255) tATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTgg < 2:1394633/148‑1 (MQ=255) tATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTgg > 2:3022097/1‑148 (MQ=255) aTGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTggg > 2:1777879/1‑148 (MQ=255) tGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGc > 1:682354/1‑148 (MQ=255) tGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGc < 1:2955334/148‑1 (MQ=255) gAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCg < 2:69462/148‑1 (MQ=255) gAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCg > 1:2309515/1‑148 (MQ=255) aaaaaTGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGa > 1:195178/1‑148 (MQ=255) aaaaaTGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGa > 2:4525234/1‑148 (MQ=255) aaaaTGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGaa < 2:3459971/148‑1 (MQ=255) aaaaTGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGaa < 2:431205/148‑1 (MQ=255) aaaTGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGaaa < 1:1744493/148‑1 (MQ=255) aTGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACg < 2:3077246/148‑1 (MQ=255) tGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGc > 2:85078/1‑148 (MQ=255) tGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGc > 2:2193506/1‑148 (MQ=255) tGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGc < 1:3579312/148‑1 (MQ=255) gTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCa > 1:851203/1‑148 (MQ=255) gTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCa > 1:3142904/1‑148 (MQ=255) gTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCa > 1:3160779/1‑148 (MQ=255) gTCAGTCGTGCCAGCGATGTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGATACGCa < 2:3416039/148‑1 (MQ=37) cAGTCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATTGGGGTCATGGGCGAAACGctc > 2:888499/1‑146 (MQ=37) gTCGTGCCAGCGATTTACCTGTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTg < 1:3852762/148‑1 (MQ=255) tCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTgg > 2:1290049/1‑148 (MQ=255) tCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTgg < 1:3988452/148‑1 (MQ=255) tCGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTCAGT‑GAATCTTGGGCGAAACgaatatga > 1:2051869/1‑141 (MQ=37) cGTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGa > 2:3763991/1‑148 (MQ=255) gTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGAt > 2:91993/1‑148 (MQ=255) gTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGAt < 1:2832107/148‑1 (MQ=255) gTGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGAt < 1:3503877/148‑1 (MQ=255) tGCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGAtt > 1:1906544/1‑148 (MQ=255) gCCAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTg > 1:1567797/1‑148 (MQ=255) ccAGCGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGt > 1:1699645/1‑148 (MQ=255) cAGCGATTTACCGTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGtt < 2:2131222/148‑1 (MQ=255) cGATTTACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTtcct > 2:2266316/1‑148 (MQ=255) tACCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCctca < 2:2899584/148‑1 (MQ=255) aCCTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCaa < 1:3393134/148‑1 (MQ=38) ccTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCaaa < 1:497798/148‑1 (MQ=38) ccTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCaaa < 1:1191764/148‑1 (MQ=38) cTTTTCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAAt < 2:2182630/148‑1 (MQ=255) ttttCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATg < 2:2774676/148‑1 (MQ=255) ttCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCa < 2:4332982/148‑1 (MQ=255) tCTTATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAg > 1:2551645/1‑148 (MQ=38) tCTTATAGAAACACGAAAGTTAAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAg < 2:2048917/148‑1 (MQ=255) ttATAGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGct < 1:4113236/148‑1 (MQ=37) tataGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGctc > 1:2659483/1‑148 (MQ=38) taGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTa > 1:736311/1‑148 (MQ=255) taGAAACACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTa > 2:3819373/1‑148 (MQ=255) aaacACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTAtgt > 2:1846330/4‑148 (MQ=37) aaacACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTAtgt > 1:366857/4‑148 (MQ=37) aacACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTAtgtg > 2:125088/3‑148 (MQ=255) aacACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTAtgtg < 1:3448222/146‑1 (MQ=255) aacACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTAtgtg < 1:629332/146‑1 (MQ=255) aacACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTAtgtg < 1:4562535/146‑1 (MQ=255) cACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGa < 1:2975364/148‑1 (MQ=255) aCGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGAc < 1:4337026/148‑1 (MQ=255) cGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACt > 2:4576388/1‑148 (MQ=255) aaGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACtata > 2:770587/1‑148 (MQ=255) aaGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACtata > 2:534015/1‑148 (MQ=255) gTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAACCGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATaaa > 2:3626253/1‑148 (MQ=255) gTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATaaa > 2:1187655/1‑148 (MQ=255) ttCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATaaaa < 1:833641/148‑1 (MQ=255) ttAACCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATAAGTCGCTTGTAGT‑GAGTCTTGGACGAAACGCACGTGGATTGTTCCTCCGCAAATGCAGCTCTATGTGGACTATAAAAttaaa < 2:4044602/148‑5 (MQ=255) aTCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAAttaaagt < 1:1276732/148‑7 (MQ=25) tCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAAttaaagtg < 2:3557984/148‑8 (MQ=25) cGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGtgac > 2:2572794/1‑145 (MQ=25) cGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGAc > 2:4619094/1‑148 (MQ=21) cacaTACAGACATTCATGTACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCaa > 1:2764258/1‑148 (MQ=21) cacaTACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCaa > 1:2933532/1‑148 (MQ=25) acaTACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCGAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAAt < 2:2655712/148‑1 (MQ=255) aCAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATtata < 1:4503356/148‑1 (MQ=255) cAGACATTCATGGACAGCGACCTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATAc < 2:3934946/148‑1 (MQ=255) aCATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTGTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTc < 1:2181804/148‑1 (MQ=255) ttCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAAt < 2:3243045/148‑1 (MQ=21) ttCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAAt < 1:100146/148‑1 (MQ=25) cATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATtg < 2:4156829/148‑1 (MQ=255) tGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATtgat < 2:2080351/148‑1 (MQ=21) aCAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTACACATCAATTgaagaa > 2:329021/1‑148 (MQ=18) cAGCGAACTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATtgatgaga < 2:3924364/148‑3 (MQ=21) aaCTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGattcac < 1:1494127/148‑2 (MQ=255) aCTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGattcact < 2:1468002/148‑3 (MQ=255) aCTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGattcact < 1:3336057/148‑3 (MQ=255) aCTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGattcact > 2:1939869/1‑146 (MQ=255) aCTGAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGattcact > 1:4574470/1‑146 (MQ=255) gAACCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGattcactcct < 1:3238946/148‑6 (MQ=255) aaCCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGattcactccta < 2:2380993/148‑7 (MQ=255) aCCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGattcactcctac < 2:4475529/148‑8 (MQ=18) aCCAACTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTAc > 1:1055814/1‑148 (MQ=255) aCTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGa < 2:2425656/148‑1 (MQ=18) cTTTGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGAt < 1:4393106/148‑1 (MQ=21) tGCAATATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATtga > 1:989437/1‑148 (MQ=255) aaTATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATtgatga > 1:3760810/1‑148 (MQ=255) aaTATGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATtgatga > 2:3181986/1‑148 (MQ=255) atatGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATtgatgaa < 2:1352943/148‑2 (MQ=18) tatGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATtgatgaat < 1:1808505/148‑3 (MQ=18) tGTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATtgatgaatct < 2:2991213/148‑5 (MQ=255) gTCGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATtgatgaatctt > 1:143053/1‑143 (MQ=255) cGCTTTTATT‑GAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATtgatgaatctttt < 2:1593264/148‑8 (MQ=255) | TTGGTATGAAAAATGTCAGTCGTGCCAGCGATTTACCTTTTCTTATAGAATCACGAAAGTTCAATTATCCGCAATGGTATCGAACACATACAGACATTCATGGACAGCGAACTGAACCAACTTTGCAATATGTCGCTTTCATT‑GAATCTTGGGCGAAACGCACGTGGATTGTTCCTCCACAAATGCAGCTCTATGTGGACTATAAAATAGAAGTTACGGATATTCTAACCAATTATACATCAATTGATGAAATTCATTCTTACTCGATTGATGAGTCGTTT > CP043523/1884527‑1884807 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |