BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP043523	1,884,804	G→T	S162S (TCG→TCT)	FTN78_chr1930 →	Putative UV‑damage repair protein UvrX

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP043523	1,884,804	0	G	T	100.0%	761.9 / NA	221	S162S (TCG→TCT)	FTN78_chr1930	Putative UV‑damage repair protein UvrX
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (115/106); total (115/106)

Only 100 of 223 total aligned reads displayed.

TCATTGAATCTTGGGCGAAACGCACGTGGATTGTTCCTCCACAAATGCAGCTCTATGTGGACTATAAAATAGAAGTTACGGATATTCTAACCAATTATACATCAATTGATGAAATTCATTCTTACTCGATTGATGAGTCGTTTCTTGACGTAACAGAATCACTCAATTTCTTTTATCCTGAGATTAAAAATCGTTATGAACAAATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTCGGACTATATGTGACTGTGGGCATG  >  CP043523/1884665‑1884939

ttaTTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCttttttgga                                                                                                                                 >  1:3639408/3‑143 (MQ=255)

  aTTGAGTCTTGGGCGAAACGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCttttttggata                                                                                                                               >  2:1748991/1‑141 (MQ=12)

           tGGGCGAAACGCACGTGGATTGTTCCGCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAAt                                                                                                                      >  2:4605150/1‑148 (MQ=2)

                 aaaCGCACGTGGATTGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCattga                                                                                                                >  2:4315882/1‑144 (MQ=255)

                               tGTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCt                                                                                                  <  2:2225016/148‑1 (MQ=255)

                                gTTCCTCCTCAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTg                                                                                                 <  1:2266316/148‑1 (MQ=255)

                                    ctcctcAAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGAt                                                                                             <  1:2470668/148‑1 (MQ=255)

                                       ctcaAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTaa                                                                                          <  1:3612927/146‑1 (MQ=255)

                                        tcaAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTaaa                                                                                         >  2:2356182/2‑148 (MQ=255)

                                        tcaAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTaaa                                                                                         >  1:864836/2‑148 (MQ=255)

                                         caAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTaaaa                                                                                        <  2:764217/148‑1 (MQ=255)

                                         caAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTaaaa                                                                                        <  1:567379/148‑1 (MQ=255)

                                         caAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTaaaa                                                                                        >  1:2116931/1‑148 (MQ=255)

                                         caAATGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTaaaa                                                                                        >  1:144421/1‑148 (MQ=255)

                                            aTGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATc                                                                                     <  1:2910449/148‑1 (MQ=255)

                                            aTGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATc                                                                                     >  1:84921/1‑148 (MQ=255)

                                             tGCAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCg                                                                                    <  2:2482271/148‑1 (MQ=255)

                                               cAGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCgat                                                                                  >  2:1681762/1‑146 (MQ=255)

                                                aGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCgata                                                                                 >  1:4429197/1‑145 (MQ=255)

                                                aGCTCTATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATa                                                                                 <  1:3317457/148‑1 (MQ=255)

                                                  ctctATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATg                                                                               <  1:3829828/148‑1 (MQ=255)

                                                  ctctATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATg                                                                               >  2:1883409/1‑148 (MQ=255)

                                                  ctctATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATg                                                                               <  1:2572794/148‑1 (MQ=255)

                                                   tctATGTGGACTATAAAATTAAAGTGACAGATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGa                                                                              >  1:2984429/1‑148 (MQ=255)

                                                                           tgacagATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGa                                                      <  1:4574188/143‑1 (MQ=255)

                                                                            gacagATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGAc                                                     <  1:3847872/144‑1 (MQ=255)

                                                                             acagATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACt                                                    <  2:857113/145‑1 (MQ=255)

                                                                             acagATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACt                                                    >  2:3204672/4‑148 (MQ=255)

                                                                               agATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTg                                                  >  2:3034639/2‑148 (MQ=255)

                                                                               agATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTg                                                  <  2:2825880/147‑1 (MQ=255)

                                                                                gATATACTGACCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGc                                                 <  2:3841596/148‑1 (MQ=255)

                                                                                  tatactgaCCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCaa                                               >  2:3491685/8‑148 (MQ=255)

                                                                                  tatactgaCCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCaa                                               <  1:105424/141‑1 (MQ=255)

                                                                                  tatactgaCCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCaa                                               <  1:2141311/141‑1 (MQ=255)

                                                                                   atactgaCCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAAc                                              <  1:1013990/142‑1 (MQ=255)

                                                                                   atactgaCCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAAc                                              >  2:644513/7‑148 (MQ=255)

                                                                                   atactgaCCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAAc                                              <  2:1047159/142‑1 (MQ=255)

                                                                                   atactgaCCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAAc                                              >  1:1483175/7‑148 (MQ=255)

                                                                                    tactgaCCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACg                                             >  1:22179/6‑148 (MQ=255)

                                                                                     actgaCCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGt                                            <  1:2339625/144‑1 (MQ=255)

                                                                                     actgaCCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGt                                            <  2:1180994/144‑1 (MQ=255)

                                                                                     actgaCCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGt                                            >  1:4081489/5‑148 (MQ=255)

                                                                                      ctgaCCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTg                                           >  1:1646494/4‑148 (MQ=255)

                                                                                      ctgaCCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTg                                           <  2:565080/145‑1 (MQ=255)

                                                                                         aCCAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTgaga                                        <  1:534015/148‑1 (MQ=255)

                                                                                          ccAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGAt                                       <  1:4525696/148‑1 (MQ=255)

                                                                                          ccAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGAt                                       <  1:4619094/148‑1 (MQ=255)

                                                                                          ccAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGAt                                       <  1:2420179/148‑1 (MQ=255)

                                                                                           cAATTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGAtt                                      >  1:1495548/1‑148 (MQ=255)

                                                                                            aaTTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTc                                     >  2:3756328/1‑148 (MQ=255)

                                                                                             aTTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCg                                    >  2:4105422/1‑148 (MQ=255)

                                                                                             aTTATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCg                                    >  1:2177486/1‑148 (MQ=255)

                                                                                              ttATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCga                                   >  2:2627189/1‑148 (MQ=255)

                                                                                              ttATACGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCga                                   >  2:1642294/1‑148 (MQ=255)

                                                                                               tataCGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCgag                                  <  1:2378620/148‑1 (MQ=255)

                                                                                               tataCGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCgag                                  >  1:4283896/1‑148 (MQ=255)

                                                                                               tataCGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCgag                                  <  2:1342015/148‑1 (MQ=255)

                                                                                                ataCGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCgaga                                 >  2:1121518/1‑148 (MQ=255)

                                                                                                ataCGTCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCgaga                                 <  2:2901970/148‑1 (MQ=255)

                                                                                                 tacgtCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGAt                                >  1:676544/5‑148 (MQ=255)

                                                                                                  acgtCAATTGATGAGATTCACTCCTACTCGTTTGATGAATCTTTTTGGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGATATTCGAGATa                               <  1:768296/145‑1 (MQ=255)

                                                                                                   cgtCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATaa                              >  2:4553693/3‑148 (MQ=255)

                                                                                                    gtCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATaaa                             >  1:2716201/2‑148 (MQ=255)

                                                                                                     tCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAAc                            <  2:1636122/148‑1 (MQ=255)

                                                                                                     tCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAAc                            >  1:3454309/1‑148 (MQ=255)

                                                                                                     tCAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAAc                            <  2:2933532/148‑1 (MQ=255)

                                                                                                     tCAATTGATGAGATCCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAAc                            <  1:1187655/148‑1 (MQ=255)

                                                                                                      cAATTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACt                           >  2:3238437/1‑148 (MQ=255)

                                                                                                       aaTTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACta                          <  1:939292/148‑2 (MQ=255)

                                                                                                       aaTTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACta                          >  2:227080/1‑147 (MQ=255)

                                                                                                       aaTTGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACta                          <  2:338389/148‑2 (MQ=255)

                                                                                                         ttGATGAGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACtagg                        >  1:366578/1‑145 (MQ=255)

                                                                                                          tgatgaGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGa                       >  1:115533/1‑148 (MQ=255)

                                                                                                           gatgaGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGAc                      <  2:1850725/148‑1 (MQ=255)

                                                                                                            atgaGATTCACTCCTACTCGATTGATGAATCTTTTTTTTTTTTTTCATAATCATTGAACTTCTTCTACCCTAAGATTAAAAATCGATATGAATAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGTACt                     >  2:1434610/1‑148 (MQ=255)

                                                                                                            atgaGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACt                     <  1:4444348/148‑1 (MQ=255)

                                                                                                            atgaGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACt                     <  2:315192/148‑1 (MQ=255)

                                                                                                            atgaGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACt                     <  2:4394292/148‑1 (MQ=255)

                                                                                                             tgagattcactcCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACta                    >  1:3124042/5‑148 (MQ=255)

                                                                                                             tgagattcactcCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACta                    >  2:3365160/5‑148 (MQ=255)

                                                                                                             tgagattcactcCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACta                    >  2:3663052/5‑148 (MQ=255)

                                                                                                             tgaGATTCACTCCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAAGCGCATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACta                    >  2:1360658/1‑148 (MQ=255)

                                                                                                               agattcactcCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACtata                  >  1:1683943/3‑148 (MQ=255)

                                                                                                                gattcactcCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACTatat                 <  2:1304110/147‑1 (MQ=255)

                                                                                                                 attcactcCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACTATAtg                >  1:1770533/1‑148 (MQ=255)

                                                                                                                  ttcactcCTACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACTATAtgt               <  2:4040341/148‑1 (MQ=255)

                                                                                                                   tcactcctACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACTATAtgtg              >  1:2780124/8‑148 (MQ=255)

                                                                                                                    cactcctACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACTATATGTGa             <  1:3295566/142‑1 (MQ=255)

                                                                                                                     actcctACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACTATATGTGAc            <  1:4382018/143‑1 (MQ=255)

                                                                                                                       tcctACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACTATATGTGACtg          >  1:3754541/4‑148 (MQ=255)

                                                                                                                       tcctACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACTATATGTGACtg          <  1:1918298/145‑1 (MQ=255)

                                                                                                                       tcctACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACTATATGTGACtg          >  1:1466842/4‑148 (MQ=255)

                                                                                                                        cctACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACTATATGTGACtgt         >  2:3466630/3‑148 (MQ=255)

                                                                                                                        cctACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACTATATGTGACtgt         <  1:2053093/146‑1 (MQ=255)

                                                                                                                         ctACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACTATATGTGACtgtt        <  2:1991801/147‑2 (MQ=255)

                                                                                                                          tACTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACTATATGTGACtgttg       <  2:389717/148‑3 (MQ=255)

                                                                                                                           aCTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACTATATGTGACTGTtgg      <  2:141004/148‑1 (MQ=255)

                                                                                                                            cTCGATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACTATATGTGACTGTtggg     <  1:3876448/148‑2 (MQ=255)

                                                                                                                              cGATTGATGAATCTTTTTTTGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACTATATGTGACTGTTGGGAt   <  2:1551598/148‑1 (MQ=255)

                                                                                                                               gATTGATGAATCTTTTTTGGATATCACAGAATCATTGAACTTCTTCTACCCTGAGATTAAAAATCGATATGAACAGATTAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTAGGACTATATGTGACTGTTGGGATg  <  1:1311416/148‑1 (MQ=255)

TCATTGAATCTTGGGCGAAACGCACGTGGATTGTTCCTCCACAAATGCAGCTCTATGTGGACTATAAAATAGAAGTTACGGATATTCTAACCAATTATACATCAATTGATGAAATTCATTCTTACTCGATTGATGAGTCGTTTCTTGACGTAACAGAATCACTCAATTTCTTTTATCCTGAGATTAAAAATCGTTATGAACAAATGAATCGAATTGCTTTAGACTTGCAACGTGAGATTCGAGATAAACTCGGACTATATGTGACTGTGGGCATG  >  CP043523/1884665‑1884939

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`