| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP043523 | 1,885,158 | G→T | L280L (CTG→CTT) | FTN78_chr1930 → | Putative UV‑damage repair protein UvrX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP043523 | 1,885,158 | 0 | G | T | 98.9% | 879.4 / NA | 360 | L280L (CTG→CTT) | FTN78_chr1930 | Putative UV‑damage repair protein UvrX |
| Reads supporting (aligned to +/- strand): ref base G (0/1); major base T (190/165); minor base A (0/4); total (190/170) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.82e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 360 total aligned reads displayed.
GAAGATGTCCCTAGTAAACTATGGACGATCCCTAAGATGACGGACTTCTGGGGAATCGGAAAACGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCTTTTTTGC‑TGAAGCAAAAATTAGGAATAATTGGACTTCAACATTTTTTCCATGCTAACGGAATCGATGAAAGCAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTA > CP043523/1885021‑1885289 | gAAGATGTCCCTAATAAACTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGAATAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAAt > 1:2150801/1‑148 (MQ=255) tCCCTAATAAACTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGGAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGaac > 2:405081/1‑147 (MQ=255) tCCCTAATAAACTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGaac > 2:3265636/1‑147 (MQ=255) tCCCTAATAAACTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGaac > 1:597941/1‑147 (MQ=255) ctaatAAACTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGaacaat > 1:4527026/5‑148 (MQ=14) taatAAACTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAAtt < 2:1663660/145‑1 (MQ=255) tAAACTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGa > 1:3191247/1‑148 (MQ=14) aaaCTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGAc > 1:1223149/1‑148 (MQ=255) aaaCTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGAc > 1:747299/1‑148 (MQ=255) aaCTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACt < 2:48365/148‑1 (MQ=14) aCTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACtt > 1:1886561/1‑148 (MQ=14) cTATGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTc > 2:3902505/1‑148 (MQ=14) aTGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCag > 2:4240451/1‑147 (MQ=255) aTGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCag > 2:2759970/1‑147 (MQ=255) aTGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCag > 2:467634/1‑147 (MQ=255) tGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCagc > 2:1309027/1‑146 (MQ=9) tGGACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCagc > 1:2566780/1‑146 (MQ=9) ggACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCa < 2:747676/148‑1 (MQ=255) acaattccTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCAtt > 1:655523/7‑148 (MQ=255) acaattccTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCAtt < 1:2795136/142‑1 (MQ=9) caattccTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCAttt < 1:171382/143‑1 (MQ=9) caattccTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCAttt > 2:2190750/6‑148 (MQ=11) aattccTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCAtttt < 2:3344230/144‑1 (MQ=255) cTAAGATGACAGATTTCTGGGTAATTGGAAAGCGAACTGAGAAATGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCCAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCa < 2:2455819/148‑1 (MQ=255) cTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCa > 1:144859/1‑148 (MQ=255) cTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCa < 2:4420588/148‑1 (MQ=255) aGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTGAA‑CAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGc < 1:3254542/148‑1 (MQ=255) aGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCacgc > 1:2223009/1‑145 (MQ=14) gATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCacgca > 2:1804157/1‑144 (MQ=255) gATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCacgca > 1:3099688/1‑144 (MQ=255) gacagatttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAAc > 1:3355092/8‑148 (MQ=14) cagatttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACgg > 1:4047123/6‑148 (MQ=255) agatttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGa > 1:2034426/5‑148 (MQ=14) agatttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGa < 1:380048/144‑1 (MQ=14) gatttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGaa < 2:1028041/145‑1 (MQ=255) gatttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGaa > 1:160801/4‑148 (MQ=14) atttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAAt > 1:4177618/3‑148 (MQ=255) tttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAAtt > 1:523746/2‑147 (MQ=255) tttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAAtt > 1:4099279/2‑147 (MQ=255) ttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAAttg > 1:2768122/1‑146 (MQ=14) tCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGa < 1:3560071/148‑1 (MQ=255) gggAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAAttgacgaa > 1:298176/1‑141 (MQ=9) ggAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGaaa > 2:2948162/1‑148 (MQ=255) attggAAAGCGAACTGAGAAACGATTAAACACACTTTGACTCACTTCTATCAAAGAGCTTGCGAATGCTGGCCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAgta < 2:2411648/145‑3 (MQ=255) attggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAgta < 2:3108420/145‑3 (MQ=255) attggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAgta > 1:3971380/4‑146 (MQ=2) ttggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAgtaa > 1:4233423/3‑145 (MQ=255) ggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACg < 1:4591321/148‑1 (MQ=9) ggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACg > 2:641255/1‑148 (MQ=9) aaagcGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTa < 1:4290308/144‑1 (MQ=255) aaagCGAACTGAGAAACGATTAAACAAACTTGGCATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTAC‑ATAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTa < 2:3180953/148‑1 (MQ=255) cGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAagag < 2:2858075/148‑1 (MQ=255) cGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAagag > 2:1149460/1‑148 (MQ=255) aaCTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaa < 1:477563/148‑1 (MQ=14) aCTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaaa > 1:3687648/1‑148 (MQ=14) aCTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTATCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaaa > 2:4586520/1‑148 (MQ=255) cTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaaaa < 1:1941713/148‑1 (MQ=255) tGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaaaaa < 1:963540/148‑1 (MQ=14) tGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaaaaa < 1:1097967/148‑1 (MQ=14) gagaAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAat > 2:3988906/1‑148 (MQ=14) agaAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAata < 2:2138534/148‑1 (MQ=255) acgtttgaacaaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACt > 2:2359252/8‑148 (MQ=2) cGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTc > 2:812356/1‑148 (MQ=255) gATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTcc < 2:4497175/148‑1 (MQ=14) aTTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCa > 1:3223492/1‑148 (MQ=14) ttAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCaa > 1:1469881/1‑148 (MQ=14) ttAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCaa > 1:4429836/1‑148 (MQ=14) tAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCaaa < 2:1492100/148‑1 (MQ=255) aacaaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAAt > 1:3631407/1‑148 (MQ=14) caaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTACTCC‑ATAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATct < 2:2506267/148‑1 (MQ=255) aacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATctac > 2:353624/1‑148 (MQ=14) cTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATctacta > 2:3631949/1‑148 (MQ=255) ttGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAg > 2:1918701/1‑148 (MQ=255) ttGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAg > 2:1082919/1‑148 (MQ=255) tGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGc < 2:3395066/148‑1 (MQ=14) gAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCtt > 2:3475563/1‑148 (MQ=255) gAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCtt > 2:1907325/1‑148 (MQ=255) gAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCtt > 2:4299622/1‑148 (MQ=255) aaTCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTc < 1:1042245/148‑1 (MQ=14) aTCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCa > 1:2085533/1‑148 (MQ=14) tCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAg > 2:2267102/1‑148 (MQ=11) cTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCaa > 2:2580461/1‑148 (MQ=11) cTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGAAAAAAAAAAAAAAAATATACTCCAAAATCTACTAGCTTCAGCaa < 2:3023373/148‑1 (MQ=2) ttCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAAt < 1:3420049/148‑1 (MQ=255) tCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAAtt < 1:4672978/148‑1 (MQ=255) tCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAAtt > 1:2854706/1‑148 (MQ=255) aTCAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGAAAGAAAAAAATATACTCCAAAATCTACTAGCTTCAGCAATtctc < 2:3751300/148‑1 (MQ=255) cAAAGAGCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCaa < 1:3902505/148‑1 (MQ=11) agagCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAAtt < 1:94852/148‑1 (MQ=11) agagCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAAtt > 1:1002650/1‑148 (MQ=11) gagCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTc < 1:2509255/148‑1 (MQ=11) gagCTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTc < 2:664537/148‑1 (MQ=11) cTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGc < 2:1365693/148‑1 (MQ=11) cTTGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGc < 1:1320217/148‑1 (MQ=11) tGCGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCa > 2:3777132/1‑148 (MQ=11) cGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACg < 1:2613334/148‑1 (MQ=11) cGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACg < 2:609846/148‑1 (MQ=11) cGAATGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACg > 2:908257/1‑148 (MQ=11) tGCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGAc < 1:1539400/148‑1 (MQ=11) gCTGACCCACTTCTCC‑TTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACt < 1:241425/148‑1 (MQ=11) | GAAGATGTCCCTAGTAAACTATGGACGATCCCTAAGATGACGGACTTCTGGGGAATCGGAAAACGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCTTTTTTGC‑TGAAGCAAAAATTAGGAATAATTGGACTTCAACATTTTTTCCATGCTAACGGAATCGATGAAAGCAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTA > CP043523/1885021‑1885289 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |