| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP043523 | 1,885,188 | A→G | Q290Q (CAA→CAG) | FTN78_chr1930 → | Putative UV‑damage repair protein UvrX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP043523 | 1,885,188 | 0 | A | G | 99.8% | 1057.0 / NA | 416 | Q290Q (CAA→CAG) | FTN78_chr1930 | Putative UV‑damage repair protein UvrX |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (186/229); minor base T (0/1); total (186/230) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 416 total aligned reads displayed.
GGACGATCCCTAAGATGACGGACTTCTGGGGAATCGGAAAACGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCTTTTTTGCTGAAGCAAAAATTAGGAATAATTGGACTTCAACATTTTTTCCATGCTAACGGAATCGATGAAAGCAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATCGAACTTGTGATTAAAGAAATGGCT > CP043523/1885043‑1885332 | ggACAATTCCTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCa > 2:1671100/1‑148 (MQ=14) acaattccTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCAtt > 1:655523/7‑148 (MQ=255) caattccTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCAttt < 1:171382/143‑1 (MQ=9) ccTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTcc < 1:26629/148‑1 (MQ=255) ccTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCAACAAAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTcc < 2:3041484/148‑1 (MQ=255) cTAAGATGACAGATTTCTGGGTAATTGGAAAGCGAACTGAGAAATGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCCAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCa < 2:2455819/148‑1 (MQ=255) cTAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCa > 2:2162603/1‑148 (MQ=255) tAAGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCac > 1:1326719/1‑147 (MQ=255) aaGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCacg < 1:3359491/148‑3 (MQ=14) aGATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGc < 1:2024522/148‑1 (MQ=255) gATGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCacgca > 1:3099688/1‑144 (MQ=255) aTGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGcaa > 1:3957134/1‑146 (MQ=255) aTGACAGATTTCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCAACTAAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCacgcaa < 2:3586122/148‑6 (MQ=255) gatttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGaa < 2:1028041/145‑1 (MQ=255) ttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAAttg > 2:2570011/1‑146 (MQ=14) ttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAAttg < 2:4151628/148‑3 (MQ=14) ttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAAttg > 1:1405608/1‑146 (MQ=14) ttCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAAttg < 2:3184560/148‑3 (MQ=14) tCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAAttga > 1:1562768/1‑145 (MQ=14) cTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAAttgac > 1:327609/1‑144 (MQ=255) ggAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGaaa > 2:3753793/1‑148 (MQ=255) gAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAg > 1:545152/1‑148 (MQ=255) aattggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAgt < 1:2768382/144‑2 (MQ=2) attggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAgta < 2:2411533/145‑3 (MQ=255) ttggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAgtaa > 1:4233423/3‑145 (MQ=255) gAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGt < 2:1635236/148‑1 (MQ=255) aagcGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTaa > 1:2989047/4‑148 (MQ=255) gcGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAaga < 2:1141159/147‑1 (MQ=255) cGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAagag < 2:632288/148‑1 (MQ=255) aaCTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaa > 2:3349175/1‑148 (MQ=14) aaCTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaa < 1:477852/148‑1 (MQ=14) aCTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaaa > 2:746495/1‑148 (MQ=14) aCTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTATCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaaa > 2:4586520/1‑148 (MQ=255) cTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaaaa < 1:3240517/148‑1 (MQ=255) cTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaaaa > 1:1614969/1‑148 (MQ=255) tGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaaaaa < 1:1097967/148‑1 (MQ=14) agaAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAata < 2:2138534/148‑1 (MQ=255) gaAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAatat > 1:1836143/1‑148 (MQ=255) aCGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACt > 2:185786/1‑148 (MQ=14) aCGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACt < 1:3868385/148‑1 (MQ=255) cGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTc > 2:811340/1‑148 (MQ=255) cGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTc > 1:4369123/1‑148 (MQ=255) aTTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCa > 1:949863/1‑148 (MQ=14) ttAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCaa > 1:1469881/1‑148 (MQ=14) tAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCaaa < 1:758087/148‑1 (MQ=255) aacaaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAAt > 2:3167659/1‑148 (MQ=14) aacaaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAAt > 2:4450872/1‑148 (MQ=14) acaaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATc > 1:4200026/1‑148 (MQ=14) acaaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATc > 2:3937279/1‑148 (MQ=11) caaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATct > 1:2488188/1‑148 (MQ=255) caaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATct < 2:3824045/148‑1 (MQ=255) caaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTACTCCATAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATct < 2:2506267/148‑1 (MQ=255) aaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATcta < 1:4023418/148‑1 (MQ=14) aacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATctac > 1:2413998/1‑148 (MQ=14) acTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATctact < 1:976832/148‑1 (MQ=255) cTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATctacta > 2:3631949/1‑148 (MQ=255) tGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGc < 2:660744/148‑1 (MQ=14) gAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCtt > 2:1907629/1‑148 (MQ=255) aaTCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTc < 1:1042245/148‑1 (MQ=14) aTCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCa > 1:2085533/1‑148 (MQ=14) tCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAg > 2:2267102/1‑148 (MQ=11) ttCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAAt < 2:2768122/148‑1 (MQ=255) ttCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAAt < 1:3420049/148‑1 (MQ=255) tCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAAtt < 1:4672979/148‑1 (MQ=255) cTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATtc > 1:2930888/1‑148 (MQ=255) aaGAGCGTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAAt > 2:4653720/1‑148 (MQ=11) agagCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAAtt > 1:1002650/1‑148 (MQ=11) agCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCt > 1:4160891/1‑148 (MQ=11) cTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGc < 2:1365693/148‑1 (MQ=11) cTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGc > 1:3157901/1‑148 (MQ=11) ttGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGcc > 1:3593681/1‑148 (MQ=11) tGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCa < 1:2190750/148‑1 (MQ=11) cGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACg < 2:2884408/148‑1 (MQ=11) gAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGt > 2:4326354/1‑148 (MQ=11) aTGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGa > 2:871401/1‑148 (MQ=11) cTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCCGCAATTCTCAAATTCTGCCACGTGACTa < 1:2833/148‑1 (MQ=11) cttaaacAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAagag > 2:1520688/7‑148 (MQ=17) ttaaacAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAgaga > 2:604601/6‑148 (MQ=17) ttaaacAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAgaga > 1:2271262/6‑148 (MQ=17) ttaaacAAAAAATGGGAACAATTCGACTTCCGCATGTTTTCCACGCACACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAgaga < 2:3251934/143‑1 (MQ=17) taaacAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGaa < 1:465055/144‑1 (MQ=17) aaacAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGaaa < 1:4074845/145‑1 (MQ=17) aaacAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGaaa < 1:2570011/145‑1 (MQ=17) cAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAAttg < 1:3782718/148‑3 (MQ=18) aaaaaTTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAAttga > 1:1490846/1‑145 (MQ=18) aaaaaTTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGa < 1:2589836/148‑1 (MQ=18) aaaaaTTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGa < 2:4011982/148‑1 (MQ=18) aaaaaTTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGa < 2:195319/148‑1 (MQ=18) tgggAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTtgt > 1:4272861/3‑148 (MQ=18) gggAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTtgtg > 1:1305806/2‑148 (MQ=18) ggAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGa < 2:2223009/148‑1 (MQ=18) gaacaatTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGAt > 1:3683034/5‑148 (MQ=17) aacaatTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGAtt > 2:34319/4‑148 (MQ=17) aacaatTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGAtt > 2:1206745/4‑148 (MQ=17) aacaatTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCAAGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGAtt < 2:1283347/145‑1 (MQ=17) tGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGaa > 1:4543252/1‑148 (MQ=18) ggACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGaaa < 2:4527026/148‑1 (MQ=18) ggACTTCAGCATTTTTTCCACGCAAACGGAATCGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGaaa < 1:779629/148‑1 (MQ=17) gACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAAt < 1:468433/148‑1 (MQ=18) cTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATgg < 1:1204577/148‑1 (MQ=18) | GGACGATCCCTAAGATGACGGACTTCTGGGGAATCGGAAAACGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCTTTTTTGCTGAAGCAAAAATTAGGAATAATTGGACTTCAACATTTTTTCCATGCTAACGGAATCGATGAAAGCAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATCGAACTTGTGATTAAAGAAATGGCT > CP043523/1885043‑1885332 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |