| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP043523 | 1,885,212 | C→T | I298I (ATC→ATT) | FTN78_chr1930 → | Putative UV‑damage repair protein UvrX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP043523 | 1,885,212 | 0 | C | T | 99.5% | 978.5 / NA | 411 | I298I (ATC→ATT) | FTN78_chr1930 | Putative UV‑damage repair protein UvrX |
| Reads supporting (aligned to +/- strand): ref base C (0/2); new base T (187/221); total (187/224) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 411 total aligned reads displayed.
TCTGGGGAATCGGAAAACGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCTTTTTTGCTGAAGCAAAAATTAGGAATAATTGGACTTCAACATTTTTTCCATGCTAACGGAATCGATGAAAGCAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATCGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGA > CP043523/1885067‑1885354 | tCTGGGGAATTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGa < 1:3560071/148‑1 (MQ=255) aattggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAgt < 1:2768382/144‑2 (MQ=2) aaTTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAgt > 1:1507102/1‑147 (MQ=11) aaTTGGAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGAATTTTTTCCACGCAAACGGAATTGACGAAAgt < 1:3120629/148‑2 (MQ=11) attggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAgta > 1:3971380/4‑146 (MQ=2) ttggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAgtaa > 1:4234064/3‑145 (MQ=255) ttggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACCTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTaa < 2:2010614/146‑1 (MQ=255) ggAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACg < 1:4591321/148‑1 (MQ=9) gAAAGCGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGt < 2:2775007/148‑1 (MQ=255) aaagcGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTa < 1:3377541/144‑1 (MQ=255) aaagCGAACTGAGAAACGATTAAACAAACTTGGCATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTACATAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTa < 2:3180953/148‑1 (MQ=255) aagcGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTaa > 1:2989019/4‑148 (MQ=255) aagcGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTaa > 2:253039/4‑148 (MQ=255) cGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAagag > 2:1149460/1‑148 (MQ=255) cGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAagag < 2:2860620/148‑1 (MQ=255) aaCTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaa < 1:453868/148‑1 (MQ=14) aCTGAGAAACGATTAAACCAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaaa < 1:55784/148‑1 (MQ=255) aCTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaaa > 1:2133378/1‑148 (MQ=14) aCTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaaa > 2:746495/1‑148 (MQ=14) aCTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaaa > 1:3687648/1‑148 (MQ=14) tGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaaaaa < 1:963540/148‑1 (MQ=14) tGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGaaaaa < 1:1097967/148‑1 (MQ=14) agaAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAata > 1:105450/1‑148 (MQ=14) gaAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAatat > 1:1836143/1‑148 (MQ=255) aaaCGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAAtata < 1:1893987/148‑1 (MQ=14) cGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTc > 2:812356/1‑148 (MQ=255) gATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTcc < 2:2453381/148‑1 (MQ=14) aTTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCa > 1:3223492/1‑148 (MQ=14) ttAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCaa > 2:3097438/1‑148 (MQ=14) ttAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCaa > 2:3281538/1‑148 (MQ=14) ttAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCaa > 2:4370795/1‑148 (MQ=14) aacaaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAAt > 1:2535355/1‑148 (MQ=14) aacaaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAAt < 2:3661616/148‑1 (MQ=14) aacaaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAAt > 1:3631407/1‑148 (MQ=14) caaacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATct < 2:3601470/148‑1 (MQ=255) aacTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATctac > 2:3536031/1‑148 (MQ=14) cTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATctacta > 2:2382097/1‑148 (MQ=255) cTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATctacta > 1:1471761/1‑148 (MQ=255) ttGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAg > 2:1918701/1‑148 (MQ=255) tGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGc < 2:3395066/148‑1 (MQ=14) tGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGc < 2:660744/148‑1 (MQ=14) aaTCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTc < 2:1405650/148‑1 (MQ=11) aaTCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTc > 1:1572620/1‑148 (MQ=255) aTCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCa > 1:2085533/1‑148 (MQ=14) tCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAg < 1:1152420/148‑1 (MQ=255) tCACTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAg > 2:2267102/1‑148 (MQ=11) cTTCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCaa > 1:4284464/1‑148 (MQ=11) tCTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAAtt < 1:4672978/148‑1 (MQ=255) cTATCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATtc > 1:2930888/1‑148 (MQ=255) aTCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATtctc < 1:865687/148‑1 (MQ=255) tCAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCa > 1:1226457/1‑148 (MQ=255) cAAAGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCaa < 2:1898611/148‑1 (MQ=11) aaaGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCaaa > 1:1777235/1‑148 (MQ=11) aaGAGCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAAt > 2:4486066/1‑148 (MQ=11) agagCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAAtt > 1:1002650/1‑148 (MQ=11) agagCTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAAtt > 2:632087/1‑148 (MQ=11) cTTGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGc < 1:1320217/148‑1 (MQ=11) tGCGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCa > 2:3777132/1‑148 (MQ=11) cGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACg < 1:3002255/148‑1 (MQ=11) cGAATGCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACg < 2:523746/148‑1 (MQ=11) gCTGACCCACTTCTCCTTAAACAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACt < 1:241425/148‑1 (MQ=11) ccttaaacAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAaga > 2:3867659/8‑148 (MQ=17) cttaaacAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAagag > 2:1520688/7‑148 (MQ=17) ttaaacAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAgaga > 2:604601/6‑148 (MQ=17) aaacAAAAAATGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAACATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATGCTGCCACGTGACTATCATAAGCAAAGAGaaa < 2:2150801/145‑1 (MQ=17) cAAAAATTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAAttg < 1:3782718/148‑3 (MQ=18) aaaaaTTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGa < 2:4011982/148‑1 (MQ=18) aaaaaTTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGa < 1:2589836/148‑1 (MQ=18) aaTTGGGAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACt < 2:3957134/148‑1 (MQ=17) ttgggAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTtg < 1:2837698/145‑1 (MQ=18) tgggAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTtgt > 2:131997/3‑148 (MQ=18) tgggAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTtgt > 1:4693631/3‑148 (MQ=18) gggAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTtgtg < 1:727743/147‑1 (MQ=17) gggAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTtgtg < 1:495110/147‑1 (MQ=18) ggAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGa < 2:2223009/148‑1 (MQ=18) gAACAATTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGAt < 1:3265636/148‑1 (MQ=17) acaatTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTa < 1:4209035/146‑1 (MQ=18) caatTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTaa > 2:4583659/2‑148 (MQ=18) atTGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAg > 1:761003/1‑148 (MQ=18) ttGGACTTCAGCATTTTTTCCACGCAAACGGAATCGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGa < 1:405176/148‑1 (MQ=18) tGGACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGaa > 2:1664854/1‑148 (MQ=18) ggACTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGaaa > 2:3229204/1‑148 (MQ=18) aCTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAGGAGAAATTGAACTTGTGATTAAAGAAATg > 2:4192903/1‑148 (MQ=17) aCTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATg < 1:1462666/148‑1 (MQ=17) cTTCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATgg < 2:1026436/148‑1 (MQ=18) ttCAGCATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGc < 1:4142776/148‑1 (MQ=18) cagcATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTg < 2:883904/145‑1 (MQ=17) agcATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTga > 2:3111762/3‑148 (MQ=17) agcATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTga < 1:2613428/146‑1 (MQ=17) gcATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTgag > 1:439388/2‑148 (MQ=17) cATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTgaga > 2:46226/1‑148 (MQ=17) cATTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTgaga < 2:160801/148‑1 (MQ=18) aTTTTTTCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGaa > 2:4308233/1‑148 (MQ=17) tttttCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACt < 1:3901832/148‑1 (MQ=18) tttttCCACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACt > 1:2036660/1‑148 (MQ=18) ccACGCAAACGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCg > 1:2325293/1‑148 (MQ=17) cgcaaaCGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATa < 1:1671100/144‑1 (MQ=17) gcaaaCGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATaa > 2:408866/4‑148 (MQ=18) caaaCGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAg > 2:2598766/3‑148 (MQ=18) cGGAATTGACGAAAGTAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATTGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTg < 2:1223149/148‑1 (MQ=18) | TCTGGGGAATCGGAAAACGAACTGAGAAACGATTAAACAAACTTGGAATCACTTCTATCAAAGAGCTTGCGAATGCTGACCCTTTTTTGCTGAAGCAAAAATTAGGAATAATTGGACTTCAACATTTTTTCCATGCTAACGGAATCGATGAAAGCAACGTAAGAGAAAAATATACTCCAAAATCTACTAGCTTCAGCAATTCTCAAATTCTGCCACGTGACTATCATAAGCAAAGAGAAATCGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGA > CP043523/1885067‑1885354 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |