Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP043523 | 1,885,452 | A→C | A378A (GCA→GCC) | FTN78_chr1930 → | Putative UV‑damage repair protein UvrX |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP043523 | 1,885,452 | 0 | A | C | 99.0% | 1743.0 / 2.0 | 506 | A378A (GCA→GCC) | FTN78_chr1930 | Putative UV‑damage repair protein UvrX |
Reads supporting (aligned to +/- strand): ref base A (2/3); new base C (248/253); total (250/256) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.06e-01 |
Only 100 of 506 total aligned reads displayed.
CGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGAGCTGCTTCTACTTCTGAATACTCATCTATTAAGGTTTCTCGCAATATCGAAGCAACGCAAAACACAAAGGAATTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATTAGACAAATAGGGATAAGCGGGAATCAACTTTCTGATAGTTCTGTTAAACAACTGTCTTTATTTGAAAGTGTT > CP043523/1885308‑1885596 | tgAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACg > 2:795036/2‑148 (MQ=25) tgAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACg > 1:3895472/2‑148 (MQ=25) aaCTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCa < 2:165347/148‑1 (MQ=25) aCTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCaa > 1:3018174/1‑148 (MQ=25) cTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCaaa < 1:53037/148‑1 (MQ=37) ttGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCaaaa > 1:3854781/1‑148 (MQ=25) ttGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCaaaa > 2:604942/1‑148 (MQ=21) ttGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCaaaa < 1:799890/148‑1 (MQ=25) ttGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCaaaa < 1:3111762/148‑1 (MQ=37) gtgATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAaca < 1:3656109/148‑1 (MQ=37) tgATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAacac > 2:4389464/1‑148 (MQ=37) aTTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACaa > 2:2779191/1‑148 (MQ=37) aTTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACaa < 2:102808/148‑1 (MQ=37) aTTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTACTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACaa > 2:1374853/1‑148 (MQ=37) ttAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACaaa < 1:3039185/148‑1 (MQ=37) tAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAACACTCTTCTATTAAGATTTCACGCAATATTGAAGCAACACAAAATACAAAg > 2:172519/1‑148 (MQ=17) aaaGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAgg < 1:2598766/148‑1 (MQ=37) aaaGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAgg > 1:1968573/1‑148 (MQ=37) aaaGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAgg < 2:4156051/148‑1 (MQ=25) gAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGagt > 2:3232962/1‑146 (MQ=37) aaaTGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGtt < 2:3009902/148‑1 (MQ=25) aTGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGc > 1:1612981/1‑148 (MQ=37) tGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCa > 1:3510887/1‑148 (MQ=37) gagaACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGAcc > 2:690919/1‑148 (MQ=37) aCTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGc < 2:1817438/148‑1 (MQ=37) cTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCa > 2:3767180/1‑148 (MQ=37) gCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCActct > 2:4697307/1‑148 (MQ=25) gCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAAGATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAAtct > 1:60111/1‑148 (MQ=21) cGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAAtctc > 2:2849668/1‑148 (MQ=37) gATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATctct > 2:216294/1‑148 (MQ=25) tAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCttt < 1:3586813/148‑1 (MQ=37) tGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCg > 2:3565912/1‑148 (MQ=37) gagaAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGt > 1:3710409/1‑148 (MQ=25) aGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGaaaa > 1:1858193/1‑148 (MQ=25) ggCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGt > 2:56447/1‑148 (MQ=25) ggCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGt < 1:1211801/148‑1 (MQ=25) aaCTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAgg < 1:943878/148‑1 (MQ=25) aaCTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAgg < 2:3100772/148‑1 (MQ=25) aaCTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAgg > 2:893017/1‑148 (MQ=25) aCTAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAggg < 1:408866/148‑1 (MQ=25) tAGCAAGCAATCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAggggg < 2:2618533/148‑1 (MQ=25) gcaagcaaTCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAg > 2:3849257/1‑148 (MQ=25) caagcaaTCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGc < 2:2046952/148‑1 (MQ=25) aagcaaTCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCCCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCg > 1:4473966/1‑148 (MQ=25) caaTCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGAta < 2:2884386/148‑2 (MQ=255) aaTCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACTAAGGGGGAGCGAtaa < 1:1000365/148‑3 (MQ=255) aaTCTTTCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGAtaa > 2:4106693/1‑146 (MQ=255) tttCACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACa > 1:2021244/1‑148 (MQ=255) cACTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCCCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAAt > 1:2785631/1‑148 (MQ=255) aCTTTATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATa > 1:1747043/1‑148 (MQ=255) tttATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAgg < 1:718406/148‑1 (MQ=255) tATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGa < 2:3616979/148‑1 (MQ=255) tATGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGa > 1:3956015/1‑148 (MQ=255) aTGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGAt < 2:392125/148‑1 (MQ=255) aTGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGAt < 1:4038478/148‑1 (MQ=255) tGCAGGTGCTGCTTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATa < 1:4393680/148‑1 (MQ=255) aggtgctgctTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGc > 1:3825368/5‑148 (MQ=255) ggtgctgctTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCg < 1:4308233/145‑1 (MQ=255) ggtgctgctTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCg < 2:2531869/145‑1 (MQ=255) ggtgctgctTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGAGAAGACAAATAGGGATAAGCg > 2:2382545/4‑148 (MQ=255) gtgctgctTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCgg < 1:3246010/146‑1 (MQ=255) ctgctTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGaaa > 1:1196683/1‑148 (MQ=255) gctTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATc < 2:4009011/148‑1 (MQ=255) gctTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATc > 1:2451648/1‑148 (MQ=255) gctTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATc < 2:433019/148‑1 (MQ=255) ctTCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCa > 2:2690619/1‑148 (MQ=255) ttCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCaa > 1:2336278/1‑148 (MQ=255) tCTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAAc < 2:4490146/148‑1 (MQ=255) cTACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACt < 2:2298673/148‑1 (MQ=255) tACTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACtt > 2:2028888/1‑148 (MQ=255) aCTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACttt < 2:1858193/148‑1 (MQ=255) aCTTCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACttt < 1:4697830/148‑1 (MQ=255) ttCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCt > 2:1176293/1‑148 (MQ=255) tCTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTg < 2:1776652/148‑1 (MQ=255) cTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGa < 1:3988541/148‑1 (MQ=255) cTGAATACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGa < 2:2481027/148‑1 (MQ=255) tACTCTTCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGtt > 1:3385806/1‑148 (MQ=255) ttctgttAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGtt > 1:1791061/6‑148 (MQ=255) ttctgttAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGtt > 2:1503674/6‑148 (MQ=255) tctgttAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTa > 1:115927/5‑148 (MQ=255) tCTGTTAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTa < 1:14221/148‑1 (MQ=255) ctgttAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTaa < 2:769500/145‑1 (MQ=255) gttAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCTAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAaac > 1:4235226/2‑148 (MQ=255) ttAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAaaca > 1:4571203/1‑148 (MQ=255) tAAGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAaacaa < 2:1325278/148‑1 (MQ=255) aGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACt > 2:1417628/1‑148 (MQ=255) aGGTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACt > 1:1658114/1‑148 (MQ=255) ggTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACtc < 1:1339569/148‑2 (MQ=255) ggTTTCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACtc < 1:4140773/148‑2 (MQ=255) ttCTCGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAActctct < 1:2184024/148‑1 (MQ=255) ctcGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCttt < 1:755842/148‑1 (MQ=255) tcGCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTa < 2:4295562/148‑1 (MQ=255) gCAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTAtt < 1:560908/148‑1 (MQ=255) cAATATTGAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTAttt > 1:1507144/1‑148 (MQ=255) attgAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGaaa < 2:3510887/145‑1 (MQ=255) attgAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTCTCTGATAATTCGGTCAAACAACTTTCTTTATTTGaaa > 2:4544298/4‑148 (MQ=17) gAAGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAgtg > 1:485429/1‑148 (MQ=255) aaGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAgtgt < 1:2622518/148‑1 (MQ=255) aaGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCGCTTTATTTGAAAgtgt > 2:3404679/1‑148 (MQ=255) aGCCACGCAAAACACAAAGGAGTTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATAAGACAAATAGGGATAAGCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGtt < 2:3710985/148‑1 (MQ=255) | CGAACTTGTGATTAAAGAAATGGCTGAGAACTTAGCGATAAGATTGAGAAAGGGCGGAAAACTAGCAAGCAATCTTTCACTTTATGCAGGAGCTGCTTCTACTTCTGAATACTCATCTATTAAGGTTTCTCGCAATATCGAAGCAACGCAAAACACAAAGGAATTGCAAGACCTCGCAATCTCTTTATTTCGTGAAAAGTACCAAGGGGGAGCGATTAGACAAATAGGGATAAGCGGGAATCAACTTTCTGATAGTTCTGTTAAACAACTGTCTTTATTTGAAAGTGTT > CP043523/1885308‑1885596 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |