Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP043523 | 1,885,686 | A→G | K456K (AAA→AAG) | FTN78_chr1930 → | Putative UV‑damage repair protein UvrX |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP043523 | 1,885,686 | 0 | A | G | 99.3% | 1389.6 / ‑3.5 | 444 | K456K (AAA→AAG) | FTN78_chr1930 | Putative UV‑damage repair protein UvrX |
Reads supporting (aligned to +/- strand): ref base A (1/2); new base G (247/194); total (248/196) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.86e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 |
Only 100 of 444 total aligned reads displayed.
GCGGGAATCAACTTTCTGATAGTTCTGTTAAACAACTGTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACATTCGATTTTCTATCTATACAAAAAGCAAGTAGTTTATCCGAGGGATCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGAAAAAGATGTCAGTTGACCGTTCATATAGTCCCTACGAGGTTATTA > CP043523/1885541‑1885814 | gCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGc < 1:2687976/148‑1 (MQ=255) gCGGAAATCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGc > 2:4113844/1‑148 (MQ=255) gaaaTCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAag < 1:3910057/146‑1 (MQ=255) gaaaTCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAag > 2:343141/3‑148 (MQ=255) aaTCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAagta < 1:873633/148‑1 (MQ=255) aTCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAagtag > 1:4696175/1‑148 (MQ=255) aTCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAagtag > 2:1761469/1‑148 (MQ=255) tCAACTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAagtagt < 2:1196683/148‑1 (MQ=255) aaCTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGttt > 2:2116063/1‑148 (MQ=255) aaCTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGttt < 2:4473732/148‑1 (MQ=255) aaCTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGttt > 2:576701/1‑148 (MQ=255) aCTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTa < 1:4513839/148‑1 (MQ=255) cTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTAt > 1:4344413/1‑148 (MQ=255) cTTTCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTAt < 1:2992006/148‑1 (MQ=255) tttCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATc > 2:3180213/1‑148 (MQ=255) ttCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATcc > 2:2629618/1‑148 (MQ=255) tCTGATAGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCg > 2:2304016/1‑148 (MQ=255) aGTTCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAggatt > 1:1736704/1‑145 (MQ=255) tCTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAggattcac > 2:1417394/1‑142 (MQ=255) cTGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAggattcacg < 1:1503379/148‑8 (MQ=255) tGTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACgt > 1:532137/1‑148 (MQ=255) gTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACgtg < 2:1472081/148‑1 (MQ=255) gTTAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACgtg < 1:3725005/148‑1 (MQ=255) ttAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGGTTATCCGAGGATTCACgttt > 2:4620505/1‑146 (MQ=255) tAAACAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTc > 2:4414843/1‑148 (MQ=255) aaaCAACTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCa > 1:3134947/1‑148 (MQ=255) acaacTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCAtt > 2:2648924/1‑148 (MQ=255) aacTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTa > 2:35277/1‑148 (MQ=255) aacTCTCTTTATTTGAAAGGGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCCCTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTa < 2:4596434/148‑1 (MQ=255) actctCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTAt < 1:4144754/144‑1 (MQ=255) actctCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAAGGTTCACGTGTGATTTAt > 2:4324764/5‑148 (MQ=21) acTCTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTAt < 1:1237865/148‑1 (MQ=255) tctCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCg > 1:3553693/3‑148 (MQ=255) ttATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACa < 2:1268182/148‑1 (MQ=255) ttATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACa < 1:4427931/148‑1 (MQ=255) tATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACaa < 1:656928/148‑1 (MQ=255) tttGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAAAATTCGATTTTCTATCCATTCAAAAAGCAAGTAGTTTATCCGAAGGTTCACGTGTGATTTATCGAAATAAAc < 2:485429/148‑1 (MQ=14) aaaGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCAt > 1:1914182/1‑148 (MQ=255) aaGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCAtt > 1:2528444/1‑148 (MQ=255) aaGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCAtt > 1:4649024/1‑148 (MQ=255) aaGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCAtt < 1:1419143/148‑1 (MQ=255) aaGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCAtt < 1:3409229/148‑1 (MQ=255) aGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTg > 2:1062907/1‑148 (MQ=255) ttCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAgg > 2:3917560/1‑148 (MQ=255) tCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGt > 1:1342369/1‑148 (MQ=255) tCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGt < 2:3060685/148‑1 (MQ=255) cAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTc < 1:2800072/148‑1 (MQ=255) aGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCAt > 1:2389670/1‑148 (MQ=255) gAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATg > 1:3498455/1‑148 (MQ=255) gAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATg < 2:1586606/148‑1 (MQ=255) aaaTCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATgca > 1:1464432/1‑148 (MQ=255) aTCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATgcagc > 1:2251336/1‑148 (MQ=255) aTCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATgcagc > 1:2367890/1‑148 (MQ=255) tCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATgcagca > 2:1702171/1‑148 (MQ=255) tCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATgcagca < 2:3571805/148‑1 (MQ=255) tCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATgcagca > 1:1526055/1‑148 (MQ=255) aaaCTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAg > 1:4073084/1‑148 (MQ=25) aaCTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGt > 2:205917/1‑148 (MQ=25) aCTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTc < 2:2409602/148‑1 (MQ=25) cTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCa < 2:4035625/148‑1 (MQ=21) taataaAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTCTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAgccca > 2:2463684/1‑144 (MQ=21) aataaAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAg > 1:1031804/1‑148 (MQ=25) aaaaaaaGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCAGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGa > 2:1884460/3‑148 (MQ=21) taaAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGAc > 2:2712640/1‑148 (MQ=21) aaaaaGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCATGAct > 1:1004880/1‑147 (MQ=21) aaaGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAag > 2:449820/1‑148 (MQ=25) aaGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAagg > 2:2973412/1‑148 (MQ=25) cAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAaggagg > 1:603155/1‑148 (MQ=25) aaGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAaggaggt < 1:3290521/148‑2 (MQ=25) aaGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAaggaggt > 1:2636964/1‑147 (MQ=25) gAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGtaa < 2:1011869/148‑1 (MQ=21) tCACTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGtaaaat > 1:2023601/1‑147 (MQ=21) cacaCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGa < 1:948025/148‑1 (MQ=18) aCTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGAt > 2:767174/1‑148 (MQ=21) aCTCCAAAAAGCTATTGAGGAGAGTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATACGAGGATTCACGTGTCATTTATCGGAACAAACGCATTGGAGGTCATGCAGCAAGTCAAGACAAGGCGGTAAAAGAt > 2:3719186/1‑148 (MQ=18) cTCCAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATg < 2:2365489/148‑1 (MQ=21) ccAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTc > 1:2911611/1‑148 (MQ=21) cAAAAAGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCa < 2:4085946/148‑1 (MQ=21) aaaaGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGt > 2:3031594/1‑148 (MQ=21) aaaGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGtt > 2:1657073/1‑148 (MQ=18) aaaGCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGGCAAGACAAGGAGGTAAAAGATGTCAggt > 2:2815751/1‑146 (MQ=18) gCTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGCCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGAc > 2:833286/1‑148 (MQ=255) cTATTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGAcc < 1:3950509/148‑1 (MQ=21) aTTGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGt < 2:4248872/148‑1 (MQ=21) ttGATGAGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGtt > 1:83355/1‑148 (MQ=21) tgatgaGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTc > 1:4533235/1‑148 (MQ=18) tgatgaGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTc < 2:2227653/148‑1 (MQ=21) atgaGATTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCat > 1:1150528/1‑148 (MQ=18) tgaGATTAGAGAAACTTTGGTTTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCata < 1:3844659/148‑1 (MQ=18) gaTTAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAg > 2:1796886/1‑148 (MQ=18) ttAGAGAAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCatacagcc < 1:20968/148‑6 (MQ=18) gaAACTTTCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTat > 2:2859944/1‑147 (MQ=18) actttCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTatgaa < 1:2774794/145‑5 (MQ=18) actttCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTatgaa < 1:1210642/145‑5 (MQ=18) ctttCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTatgaag < 2:2773404/146‑6 (MQ=17) tttCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGACGTCAGTTGACCGTTCATACAGCCCCTatgaagt < 1:429157/147‑7 (MQ=17) aTTCGATTTTCTATCCATTCAAAAAGCAAGTAGTTTATCCGAAGGTTCACGTGTGATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGt < 2:3446857/148‑1 (MQ=11) ttCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTatgaagtc > 2:139748/1‑141 (MQ=17) tCGATTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGaagtca > 2:3342368/1‑143 (MQ=17) aTTTTCTTTCAATACAAAAGGCAAGTAGTTTATCCGAGGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGtcatcc > 1:1798051/1‑146 (MQ=17) | GCGGGAATCAACTTTCTGATAGTTCTGTTAAACAACTGTCTTTATTTGAAAGTGTTCAAGAAAATCAAACTAATAAAAAGCAAGAATCACTCCAAAAAGCTATTGATGAGATTAGAGAAACATTCGATTTTCTATCTATACAAAAAGCAAGTAGTTTATCCGAGGGATCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGAAAAAGATGTCAGTTGACCGTTCATATAGTCCCTACGAGGTTATTA > CP043523/1885541‑1885814 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |