BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP043523	1,848,409	A→T	T40S (ACA→TCA)	FTN78_chr1898 →	Cold shock protein of CSP family

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP043523	1,848,409	0	A	T	100.0%	797.0 / NA	303	T40S (ACA→TCA)	FTN78_chr1898	Cold shock protein of CSP family
Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (149/154); total (149/154)

Only 100 of 304 total aligned reads displayed.

ACGCAGATAAAGGATTTGGCTTTATCACTTCAGAAGAAGGCAAAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAAACACTTGATGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAGCTGGAGTCATGACTTCAGTTTTTTTATATTCAGTTGC  >  CP043523/1848320‑1848553

acgctactAAAGGATTTGGTTTTATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCa                                                                                        >  2:4148062/8‑148 (MQ=11)

 cgctactAAAGGATTTGGTTTTATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCaa                                                                                       >  2:3335242/7‑148 (MQ=11)

 cgctactAAAGGATTTGGTTTTATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCaa                                                                                       <  2:2535275/142‑1 (MQ=11)

   ctactAAAGGATTTGGTTTTATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGc                                                                                     <  1:2792447/144‑1 (MQ=11)

   ctactAAAGGATTTGGTTTTATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGc                                                                                     <  1:3388363/144‑1 (MQ=11)

    tactAAAGGATTTGGTTTTATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCa                                                                                    <  1:463505/145‑1 (MQ=11)

      ctAAAGGATTTGGTTTTATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGt                                                                                  >  2:3714311/2‑148 (MQ=11)

       tAAAGGATTTGGTTTTATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGtt                                                                                 >  1:2879696/1‑148 (MQ=11)

       tAAAGGATTTGGTTTTATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGtt                                                                                 >  1:471562/1‑148 (MQ=11)

        aaaGGATTTGGTTTTATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTa                                                                                <  1:664035/148‑1 (MQ=11)

        aaaGGATTTGGTTTTATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTa                                                                                >  2:3836472/1‑148 (MQ=11)

         aaGGATTTGGTTTTATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTaa                                                                               >  1:4388048/1‑148 (MQ=11)

          aGGATTTGGTTTTATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAat                                                                              >  2:2514677/1‑148 (MQ=11)

          aGGATTTGGTTTTATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAat                                                                              <  2:3071380/148‑1 (MQ=11)

          aGGATTTGGTTTTATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAat                                                                              <  1:4593783/148‑1 (MQ=11)

           ggATTTGGTTTTATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAata                                                                             <  1:4190761/148‑1 (MQ=11)

            gATTTGGTTTTATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAatat                                                                            <  1:4502506/148‑1 (MQ=11)

             aTTTGGTTTTATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATc                                                                           <  2:2478151/148‑1 (MQ=11)

              tttGGTTTTATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATca                                                                          >  2:1499987/1‑148 (MQ=11)

                  gttttATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACaaa                                                                      <  1:3790181/146‑1 (MQ=11)

                  gttttATTACCTCTGAAGATGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACaaa                                                                      >  1:1520755/3‑148 (MQ=11)

                           cctctgaagatGGTCAAGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAAtt                                                             <  2:2210587/143‑1 (MQ=11)

                                   gatggtcaaGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGa                                                     >  2:901718/8‑148 (MQ=14)

                                    atggtcaaGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGaa                                                    <  1:3737240/142‑1 (MQ=14)

                                    atggtcaaGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGaa                                                    >  2:1030778/7‑148 (MQ=14)

                                    atggtcaaGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGaa                                                    >  2:4278196/7‑148 (MQ=14)

                                      ggtcaaGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGaaaa                                                  <  1:3992256/144‑1 (MQ=14)

                                      ggtcaaGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGaaaa                                                  >  1:428425/5‑148 (MQ=14)

                                        tcaaGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATc                                                >  2:3235817/3‑148 (MQ=255)

                                        tcaaGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATc                                                >  2:3480563/3‑148 (MQ=255)

                                        tcaaGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATc                                                >  2:3547149/3‑148 (MQ=255)

                                        tcaaGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATc                                                >  2:3554169/3‑148 (MQ=255)

                                        tcaaGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATc                                                >  1:2157785/3‑148 (MQ=255)

                                        tcaaGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATc                                                <  1:1702869/146‑1 (MQ=255)

                                         caaGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCg                                               <  2:2795629/147‑1 (MQ=255)

                                         caaGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCg                                               >  2:82244/2‑148 (MQ=255)

                                          aaGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGt                                              >  2:3108856/1‑148 (MQ=255)

                                           aGATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTg                                             <  2:1963178/148‑1 (MQ=255)

                                            gATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGc                                            <  2:3769553/148‑1 (MQ=255)

                                            gATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGc                                            >  1:185462/1‑148 (MQ=255)

                                            gATTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGc                                            >  2:2448596/1‑148 (MQ=255)

                                             aTTTGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCa                                           <  1:1641260/148‑1 (MQ=255)

                                              tttGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCaa                                          <  2:2292684/148‑1 (MQ=255)

                                              tttGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCaa                                          <  1:4330350/148‑1 (MQ=255)

                                               ttGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCaaa                                         >  2:2590230/1‑148 (MQ=255)

                                                tGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCaaaa                                        <  2:3169294/148‑1 (MQ=255)

                                                tGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCaaaa                                        >  2:4651015/1‑148 (MQ=255)

                                                tGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCaaaa                                        >  1:306716/1‑148 (MQ=255)

                                                tGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCaaaa                                        <  1:2076466/148‑1 (MQ=255)

                                                tGTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCaaaa                                        >  2:1654363/1‑148 (MQ=255)

                                                 gTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCaaaaa                                       <  1:181504/148‑2 (MQ=255)

                                                 gTTCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCaaaaa                                       >  1:3280558/1‑147 (MQ=255)

                                                  ttCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCaaaaac                                      >  2:1784858/1‑146 (MQ=255)

                                                   tCGCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACt                                     <  1:2240163/148‑1 (MQ=255)

                                                     gCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCGACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTgg                                   <  2:1324110/148‑1 (MQ=14)

                                                     gCTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTgg                                   >  1:928005/1‑148 (MQ=14)

                                                      cTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGa                                  <  2:4332623/148‑1 (MQ=255)

                                                      cTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGa                                  >  1:1016397/1‑148 (MQ=14)

                                                      cTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGa                                  >  1:2346132/1‑148 (MQ=14)

                                                      cTCACTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGa                                  <  1:1711212/148‑1 (MQ=14)

                                                         aCTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTc                               <  1:3235817/148‑1 (MQ=255)

                                                         aCTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTc                               <  1:3430084/148‑1 (MQ=14)

                                                         aCTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTc                               <  2:50559/148‑1 (MQ=14)

                                                         aCTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTc                               >  1:1357898/1‑148 (MQ=14)

                                                         aCTTCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTc                               >  1:3915442/1‑148 (MQ=14)

                                                           ttCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCAt                             <  1:1939949/148‑1 (MQ=14)

                                                           ttCTCATCAATCCAATCTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCAt                             >  2:4007286/1‑148 (MQ=14)

                                                              tcatcaatccaatcTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGAc                          >  1:2589572/5‑148 (MQ=14)

                                                              tcatcaatccaatcTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGAc                          <  1:3531215/144‑1 (MQ=14)

                                                               catcaatccaatcTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACt                         <  1:747105/145‑1 (MQ=255)

                                                               catcaatccaatcTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACt                         >  1:3549852/4‑148 (MQ=17)

                                                               catcaatccaatcTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACt                         <  1:251760/145‑1 (MQ=17)

                                                                atcaatccaatcTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACtt                        >  2:2894574/3‑148 (MQ=255)

                                                                atcaatccaatcTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACtt                        <  1:1156750/146‑1 (MQ=255)

                                                                atcaatccaatcTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACtt                        <  2:2228342/146‑1 (MQ=255)

                                                                atcaatccaatcTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACtt                        <  2:2096044/146‑1 (MQ=255)

                                                                atcaatccaatcTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATAGTGCAAAAACTGGAGTCATGACtt                        <  2:748499/146‑1 (MQ=17)

                                                                  caatccaatcTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCa                      >  2:2429690/1‑148 (MQ=255)

                                                                  caatccaatcTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAAAAATGAAAAAACTGGAGTCATGACTTCa                      <  2:1767637/148‑1 (MQ=17)

                                                                   aatccaatcTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAg                     <  1:2432982/148‑1 (MQ=255)

                                                                    atccaatcTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGt                    <  1:1294334/148‑1 (MQ=255)

                                                                     tccaatcTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGtt                   >  2:28613/1‑148 (MQ=255)

                                                                      ccaatcTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGttt                  >  1:4544966/1‑148 (MQ=255)

                                                                      ccaatcTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGttt                  >  2:676837/1‑148 (MQ=255)

                                                                      ccaatcTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTGGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGttt                  >  2:4117921/1‑148 (MQ=255)

                                                                        aatcTGATGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGttttt                >  2:2635713/1‑148 (MQ=255)

                                                                               tGGATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGTTTTTTTATAtt         <  2:582318/148‑1 (MQ=255)

                                                                                 gATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGTTTTTTTATATTCa       <  2:533871/148‑1 (MQ=255)

                                                                                 gATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGTTTTTTTATATTCa       <  1:2873429/148‑1 (MQ=255)

                                                                                 gATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGTTTTTTTATATTCa       >  1:3611831/1‑148 (MQ=255)

                                                                                 gATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGTTTTTTTATATTCa       >  2:4417613/1‑148 (MQ=255)

                                                                                 gATTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGTTTTTTTATATTCa       <  2:1753572/148‑1 (MQ=255)

                                                                                  aTTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGTTTTTTTATATTCAg      <  1:1084508/148‑1 (MQ=255)

                                                                                  aTTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGTTTTTTTATATTCAg      <  2:4545510/148‑1 (MQ=255)

                                                                                  aTTCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGTTTTTTTATATTCAg      >  2:1063828/1‑148 (MQ=255)

                                                                                   ttCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGTTTTTTTATATTCAGt     >  2:2929356/1‑148 (MQ=255)

                                                                                    tCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGTTTTTTTATATTCAGtt    >  2:3413640/1‑148 (MQ=255)

                                                                                    tCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGTTTTTTTATATTCAGtt    >  2:1163406/1‑148 (MQ=255)

                                                                                    tCAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGTTTTTTTATATTCAGtt    >  1:3723391/1‑148 (MQ=255)

                                                                                     cAAATCACTTGACGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAACTGGAGTCATGACTTCAGTTTTTTTATATTCAGTTg   >  1:2722194/1‑148 (MQ=255)

ACGCAGATAAAGGATTTGGCTTTATCACTTCAGAAGAAGGCAAAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAAACACTTGATGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGACCTCAAGCAGTTAATATCACAAAAGCATAATTGTATCTGAAAATCGTGCAAAAGCTGGAGTCATGACTTCAGTTTTTTTATATTCAGTTGC  >  CP043523/1848320‑1848553

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`