BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP043523	1,867,563	G→A	Q13Q (CAG→CAA)	FTN78_chr1914 →	Site‑specific recombinase, DNA invertase Pin related protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP043523	1,867,563	0	G	A	100.0%	1373.6 / NA	397	Q13Q (CAG→CAA)	FTN78_chr1914	Site‑specific recombinase, DNA invertase Pin related protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (203/194); total (203/194)

Only 100 of 398 total aligned reads displayed.

TAATAAAGAGCTCAAAACTTAACAGTTGTGAGCTCTTTTTTTGTGTGTTAAAATTAAAGGAGAAAGAACGGCTCGTAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAGAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAATTTACGGGGACTACAGTTGAACGTCCACAATTTAATTTAGTGCTCAAAAAGTTAACAAATGGCGATACTTTAATTGTGA  >  CP043523/1867420‑1867705

agcgtttttgcatgtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAAt                                                                                                                                            <  1:1121480‑M1/72‑1 (MQ=255)

  cgtttttgcatgtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTa                                                                                                                                          >  1:2403614‑M1/75‑148 (MQ=255)

    tttttgcatgtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGa                                                                                                                                        <  2:939950‑M1/76‑1 (MQ=255)

        tgcatgtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAAtct                                                                                                                                    >  1:4430017‑M1/69‑148 (MQ=255)

        tgcatgtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAAtct                                                                                                                                    <  2:2123354‑M1/80‑1 (MQ=255)

         gcatgtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGGGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAAtctc                                                                                                                                   <  2:2564211‑M1/81‑1 (MQ=255)

           atgtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCaa                                                                                                                                 <  2:907698‑M1/83‑1 (MQ=255)

            tgtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCaaa                                                                                                                                >  1:2503694‑M1/65‑148 (MQ=255)

            tgtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCaaa                                                                                                                                <  1:776932‑M1/84‑1 (MQ=255)

            tgtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCaaa                                                                                                                                <  2:3029691‑M1/84‑1 (MQ=255)

             gtttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAAt                                                                                                                               >  2:3584346‑M1/64‑148 (MQ=255)

               ttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTg                                                                                                                             >  1:4385526‑M1/62‑148 (MQ=255)

               ttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTg                                                                                                                             <  1:2606750‑M1/87‑1 (MQ=255)

               ttttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTg                                                                                                                             >  2:544021‑M1/62‑148 (MQ=255)

                 ttgtcctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGaa                                                                                                                           <  1:3488187‑M1/89‑1 (MQ=255)

                      ctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCCAATTGAAGTTCt                                                                                                                      <  1:3648493‑M1/94‑1 (MQ=255)

                      ctttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCt                                                                                                                      <  2:158681‑M1/94‑1 (MQ=255)

                      ctttgtctaaattatacaatagtgactctaagacttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCt                                                                                                                      >  1:804412‑M1/55‑148 (MQ=255)

                        ttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGa                                                                                                                    <  1:205384‑M1/96‑1 (MQ=255)

                        ttgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGa                                                                                                                    <  1:3694996‑M1/96‑1 (MQ=255)

                         tgtctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGaa                                                                                                                   <  1:3946029‑M1/97‑1 (MQ=255)

                            ctaaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAaaga                                                                                                                >  1:435785‑M1/49‑148 (MQ=255)

                             taaattatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAaagaa                                                                                                               >  2:2522411‑M1/48‑148 (MQ=255)

                                attatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCa                                                                                                            <  2:1669001‑M1/104‑1 (MQ=255)

                                attatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCa                                                                                                            <  2:3890613‑M1/104‑1 (MQ=255)

                                attatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCa                                                                                                            <  2:2283806‑M1/104‑1 (MQ=255)

                                 ttatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAg                                                                                                           >  1:3903821‑M1/44‑148 (MQ=255)

                                  tatacaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAgg                                                                                                          >  1:1477339‑M1/43‑148 (MQ=255)

                                     acaatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGc                                                                                                       >  1:289057‑M1/40‑148 (MQ=255)

                                     acaatagtgactctaagatttaaggataacatcactcacAACTTAGGGCTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATGGAAGTTCTGAAAGAAGCGGGAGc                                                                                                       <  2:2763044‑M1/109‑1 (MQ=255)

                                      caatagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCa                                                                                                      <  1:563441‑M1/110‑1 (MQ=255)

                                         tagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCagaa                                                                                                   >  2:519022‑M1/36‑148 (MQ=255)

                                         tagtgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCagaa                                                                                                   <  2:3675464‑M1/113‑1 (MQ=255)

                                            tgactctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAgaagaa                                                                                                <  2:4573394‑M1/116‑1 (MQ=255)

                                              actctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGt                                                                                              >  1:337210‑M1/31‑148 (MQ=255)

                                               ctctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGtt                                                                                             >  1:4151235‑M1/30‑148 (MQ=255)

                                                 ctaagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGtttt                                                                                           <  2:295365‑M1/121‑1 (MQ=255)

                                                  taagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTc                                                                                          <  2:3879826‑M1/122‑1 (MQ=255)

                                                  taagatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTc                                                                                          <  1:2841840‑M1/122‑1 (MQ=255)

                                                    agatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCa                                                                                        >  2:3684565‑M1/25‑148 (MQ=255)

                                                    agatttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCa                                                                                        >  2:2859644‑M1/25‑148 (MQ=255)

                                                      atttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAg                                                                                      >  2:4037922‑M1/23‑148 (MQ=255)

                                                       tttaaggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGa                                                                                     >  1:2327466‑M1/22‑148 (MQ=255)

                                                        ttaaggataacatcactcacAACTTAGGGCTAGTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGTACAACAATTAGAATCTCAAATTAAAGTTCTGCAAGACGCAGGAGCAGAAGAAGTTCTCCAAGaa                                                                                    <  2:3200921‑M1/128‑1 (MQ=255)

                                                           aggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAgaaaag                                                                                 <  1:3239703‑M1/131‑2 (MQ=255)

                                                            ggataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAagaaaagt                                                                                >  1:3306807‑M1/17‑146 (MQ=255)

                                                             gataacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCaagaaaagtt                                                                               <  2:185569‑M1/133‑4 (MQ=255)

                                                                aacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTAc                                                                            >  1:321450‑M1/13‑148 (MQ=255)

                                                                aacatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTAc                                                                            >  2:3941763‑M1/13‑148 (MQ=255)

                                                                 acatcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTact                                                                           <  2:1528809‑M1/137‑2 (MQ=255)

                                                                  catcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTtactg                                                                          <  1:3413879‑M1/138‑3 (MQ=255)

                                                                   atcactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTttactgg                                                                         <  1:179743‑M1/139‑4 (MQ=255)

                                                                     cactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAgtttactggaa                                                                       <  1:891712‑M1/141‑6 (MQ=255)

                                                                     cactcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAgtttactggaa                                                                       <  2:4105455‑M1/141‑6 (MQ=255)

                                                                       ctcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAaagtttactggaact                                                                     >  2:2470789‑M1/6‑141 (MQ=255)

                                                                       ctcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAaagtttactggaact                                                                     >  1:2718865‑M1/6‑141 (MQ=255)

                                                                       ctcacAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAaagtttactggaact                                                                     >  1:2466440‑M1/6‑141 (MQ=255)

                                                                        tcacaaCTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTa                                                                    >  1:332652/5‑148 (MQ=255)

                                                                        tcacGACTGAGGGTTATTAATAGAGGTCAAAATATGAAGAGTGGGTATGCACGTGTCAGTACTTTTGAACAAAAAGTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTa                                                                    >  2:1916082‑M1/5‑148 (MQ=255)

                                                                          acAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACa                                                                  >  2:1402807‑M1/3‑148 (MQ=255)

                                                                            aaCTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGt                                                                >  1:1895908/1‑148 (MQ=255)

                                                                              cTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAGAAGTTTACTGGAACTACAGtcg                                                              <  1:2981213/148‑3 (MQ=255)

                                                                               ttAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGa                                                             <  2:4322262/148‑1 (MQ=255)

                                                                                tAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGaa                                                            <  1:4633098/148‑1 (MQ=255)

                                                                                 aGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAAc                                                           >  1:1230686/1‑148 (MQ=255)

                                                                                   ggTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGt                                                         <  2:444747/148‑1 (MQ=255)

                                                                                    gTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTc                                                        >  2:3649333/1‑148 (MQ=255)

                                                                                    gTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTc                                                        >  1:983476/1‑148 (MQ=255)

                                                                                     ttattaATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTcc                                                       >  2:3122861/1‑148 (MQ=255)

                                                                                     ttattaATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTcc                                                       >  1:2084012/1‑148 (MQ=255)

                                                                                     ttattaATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTcc                                                       >  2:1029303/1‑148 (MQ=255)

                                                                                       attaATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCcac                                                     <  1:1313441/148‑1 (MQ=255)

                                                                                           aTAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACaatt                                                 >  1:631289/1‑148 (MQ=255)

                                                                                            tAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACaattt                                                >  2:1904493/1‑148 (MQ=255)

                                                                                            tAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACaattt                                                <  1:2765869/148‑1 (MQ=255)

                                                                                            tAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACaattt                                                >  2:2526219/1‑148 (MQ=255)

                                                                                             agagGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACaattta                                               >  2:1990559/1‑148 (MQ=255)

                                                                                              gagGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACaatttaa                                              >  1:3115959/1‑148 (MQ=255)

                                                                                               agGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACaatttaat                                             <  1:677972/148‑1 (MQ=255)

                                                                                                  tCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAatttaatcta                                          <  2:3512415/148‑1 (MQ=255)

                                                                                                     aaaTATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGta                                       >  1:1399465/1‑147 (MQ=255)

                                                                                                        tatGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGtattt                                    >  1:2640653/1‑144 (MQ=255)

                                                                                                         atGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGtattta                                   <  1:4252892/148‑6 (MQ=255)

                                                                                                           gAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGtatttaaa                                 >  2:2195449/1‑141 (MQ=255)

                                                                                                                ttGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGtt                            <  2:816756/148‑1 (MQ=255)

                                                                                                                ttGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGtt                            >  2:133058/1‑148 (MQ=255)

                                                                                                                 tGGGTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGCTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTa                           >  1:1022053/1‑148 (MQ=255)

                                                                                                                   ggTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTaaa                         >  1:3538905/1‑147 (MQ=255)

                                                                                                                   ggTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTaaa                         >  2:4666365/1‑147 (MQ=255)

                                                                                                                   ggTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTaaa                         >  1:2145703/1‑147 (MQ=255)

                                                                                                                    gTATGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTaaag                        >  1:1643796/1‑146 (MQ=255)

                                                                                                                       tGCACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTaaaggat                     <  1:158681/148‑6 (MQ=255)

                                                                                                                         cACGTGTCAGTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTaaaggatgg                   >  1:1045217/1‑141 (MQ=255)

                                                                                                                                  gTACTTTTGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACttt          >  2:3341930/1‑148 (MQ=255)

                                                                                                                                      ttttGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAAtt      >  2:1752218/1‑148 (MQ=255)

                                                                                                                                      ttttGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAAtt      <  1:4533489/148‑1 (MQ=255)

                                                                                                                                       tttGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATtg     >  2:4371168/1‑148 (MQ=255)

                                                                                                                                        ttGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATtgt    <  2:2610461/148‑1 (MQ=255)

                                                                                                                                        ttGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATtgt    <  1:1967391/148‑1 (MQ=255)

                                                                                                                                         tGAACAAAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAGTTTACTGGAACTACAGTCGAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATtgtg   >  2:4085565/1‑148 (MQ=255)

TAATAAAGAGCTCAAAACTTAACAGTTGTGAGCTCTTTTTTTGTGTGTTAAAATTAAAGGAGAAAGAACGGCTCGTAACTTAGGGTTATTAATAGAGGTCAAAATATGAAAATTGGGTATGCACGTGTCAGTACTTTTGAACAGAAATTAGAATCTCAAATTGAAGTTCTGAAAGAAGCAGGAGCAGAAGAAGTTTTCCAAGAAAAATTTACGGGGACTACAGTTGAACGTCCACAATTTAATTTAGTGCTCAAAAAGTTAACAAATGGCGATACTTTAATTGTGA  >  CP043523/1867420‑1867705

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`