BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP043523	1,867,786	T→C	Y88H (TAT→CAT)	FTN78_chr1914 →	Site‑specific recombinase, DNA invertase Pin related protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP043523	1,867,786	0	T	C	100.0%	1196.8 / NA	329	Y88H (TAT→CAT)	FTN78_chr1914	Site‑specific recombinase, DNA invertase Pin related protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (170/159); total (170/159)

Only 100 of 344 total aligned reads displayed.

AGTTGAACGTCCACAATTTAATTTAGTGCTCAAAAAGTTAACAAATGGCGATACTTTAATTGTGACAAAGTTAGATCGATTAGCCAGGAACACTAAAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTTATATATTAAATATTGGACTTATCGATAATACACCGACAGGTCAACTTATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAACTTTGCTAAAATCCATGATCC  >  CP043523/1867641‑1867928

agtcgAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTcat                                                                                                                                              <  2:3335585/144‑1 (MQ=255)

agtcgAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTcat                                                                                                                                              <  2:3538905/144‑1 (MQ=255)

 gtcgAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTcata                                                                                                                                             >  1:674400/4‑148 (MQ=255)

  tcgAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTcatat                                                                                                                                            <  2:2058503/146‑1 (MQ=255)

  tcgAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTcatat                                                                                                                                            <  2:2379878/146‑1 (MQ=255)

   cgAACGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTcatata                                                                                                                                           <  2:450070/147‑1 (MQ=255)

     aaCGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATAtt                                                                                                                                         >  1:3545050/1‑148 (MQ=255)

      aCGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTa                                                                                                                                        <  2:2309899/148‑1 (MQ=255)

      aCGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTa                                                                                                                                        >  1:3972800/1‑148 (MQ=255)

       cGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTaa                                                                                                                                       <  2:3576720/148‑1 (MQ=255)

       cGTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTaa                                                                                                                                       <  2:1505641/148‑1 (MQ=255)

        gTCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTaaa                                                                                                                                      <  1:158262/148‑1 (MQ=255)

         tCCACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAat                                                                                                                                     >  2:4556742/1‑148 (MQ=255)

          ccACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAata                                                                                                                                    >  1:4065827/1‑148 (MQ=255)

          ccACAATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAata                                                                                                                                    >  1:1842657/1‑148 (MQ=255)

           cacaATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAatat                                                                                                                                   >  1:1628479/1‑148 (MQ=255)

             caATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTg                                                                                                                                 >  1:3522228/1‑148 (MQ=255)

             caATTTAATCTAGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTg                                                                                                                                 <  2:1000960/148‑1 (MQ=255)

               atttaatctaGTATTTAAAAAGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTggt                                                                                                                               <  2:2456853/148‑2 (MQ=255)

               atttaatctaGTATTTAAAAAGTTAAAGGATGGTGACACATTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATAGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTggt                                                                                                                               >  2:2752170/1‑147 (MQ=255)

                        agtatttaaaaaGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGat                                                                                                                      >  2:3705944/8‑148 (MQ=255)

                        agtatttaaaaaGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGat                                                                                                                      >  1:3327419/8‑148 (MQ=255)

                          tatttaaaaaGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGataa                                                                                                                    >  1:4178105/6‑148 (MQ=255)

                          tatttaaaaaGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGataa                                                                                                                    <  1:3200921/143‑1 (MQ=255)

                          tatttaaaaaGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGataa                                                                                                                    >  1:1822143/6‑148 (MQ=255)

                            tttaaaaaGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGataata                                                                                                                  <  2:631289/145‑1 (MQ=255)

                            tttaaaaaGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGataata                                                                                                                  <  2:71918/145‑1 (MQ=255)

                              taaaaaGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATaca                                                                                                                <  2:3915444/147‑1 (MQ=255)

                               aaaaaGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATacac                                                                                                               <  1:2238073/148‑1 (MQ=255)

                               aaaaaGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATacac                                                                                                               <  1:1969789/148‑1 (MQ=255)

                                 aaaGTTAAAGGATGGTGACACTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACAcct                                                                                                             >  1:1261580/1‑147 (MQ=255)

                                                 cacaCTTTAATTGTGACAAAGTTCGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGAttt                                                                                             <  1:1517507/145‑1 (MQ=255)

                                                    aCTTTAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTa                                                                                          <  1:540284/148‑1 (MQ=255)

                                                      tttAATTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTAcc                                                                                        >  1:3733503/1‑148 (MQ=255)

                                                         aaTTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATc                                                                                     <  2:868818/148‑1 (MQ=255)

                                                         aaTTGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATc                                                                                     >  1:1923410/1‑148 (MQ=255)

                                                           ttGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCtt                                                                                   >  2:3160316/1‑148 (MQ=255)

                                                           ttGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCtt                                                                                   <  1:1752218/148‑1 (MQ=255)

                                                           ttGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCtt                                                                                   >  2:1164330/1‑148 (MQ=255)

                                                           ttGTGACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCtt                                                                                   >  1:313956/1‑148 (MQ=255)

                                                             gtgACAAAGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCa                                                                                 <  1:4371168/148‑1 (MQ=255)

                                                                  aaaGTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTTAATCGTTATTTAATAGTGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCt                                                                            <  2:2926441/148‑1 (MQ=255)

                                                                     gTTAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCtttt                                                                         >  2:621162/1‑148 (MQ=255)

                                                                      ttAGACCGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTg                                                                        >  2:1553327/1‑148 (MQ=255)

                                                                        agaccGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTgcg                                                                      >  1:344006/5‑148 (MQ=255)

                                                                         gaccGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTgcgc                                                                     <  2:3447490/145‑1 (MQ=255)

                                                                          accGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCa                                                                    >  2:4377217/3‑148 (MQ=255)

                                                                           ccGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAg                                                                   <  2:1688364/147‑1 (MQ=255)

                                                                           ccGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAg                                                                   <  2:132802/147‑1 (MQ=255)

                                                                           ccGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAg                                                                   >  2:1044734/2‑148 (MQ=255)

                                                                            cGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGt                                                                  <  1:4284441/148‑1 (MQ=255)

                                                                            cGATTAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGt                                                                  >  1:3080913/1‑148 (MQ=255)

                                                                                tAGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGa                                                              <  1:2464031/148‑1 (MQ=255)

                                                                                 aGCCAGGAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGaa                                                             >  1:843402/1‑148 (MQ=255)

                                                                                       gAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGCATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGAc                                                       >  1:2556048/1‑148 (MQ=255)

                                                                                       gAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGAc                                                       >  1:1499290/1‑148 (MQ=255)

                                                                                       gAACACTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGAc                                                       >  2:3037335/1‑148 (MQ=255)

                                                                                          cacTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCtt                                                    <  1:3043027/148‑1 (MQ=255)

                                                                                           acTAGAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTa                                                   <  1:1322711/148‑1 (MQ=255)

                                                                                            ctagagaagTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTAt                                                  >  1:891929/5‑148 (MQ=255)

                                                                                            ctagagaagTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTAt                                                  >  2:1643165/5‑148 (MQ=255)

                                                                                            ctagagaagTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTAt                                                  >  1:4456226/5‑148 (MQ=255)

                                                                                               gagaagTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGt                                               <  1:3370910/147‑1 (MQ=255)

                                                                                               gagaagTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGt                                               <  2:185931/147‑1 (MQ=255)

                                                                                                 gaagTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTaa                                             <  2:1714253/148‑1 (MQ=255)

                                                                                                  aagTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAAc                                            >  1:3665914/1‑148 (MQ=255)

                                                                                                  aagTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAAc                                            >  2:1941903/1‑148 (MQ=255)

                                                                                                   agTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAAcc                                           >  1:1038695/1‑148 (MQ=255)

                                                                                                    gTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCa                                          >  1:3289859/1‑148 (MQ=255)

                                                                                                    gTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCa                                          >  2:3599520/1‑148 (MQ=255)

                                                                                                      tttAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAgg                                        <  2:1108195/148‑1 (MQ=255)

                                                                                                      tttAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAgg                                        >  1:1684885/1‑148 (MQ=255)

                                                                                                       ttAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGa                                       <  1:1002752/148‑1 (MQ=255)

                                                                                                        tAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGAc                                      >  2:3238000/1‑148 (MQ=255)

                                                                                                         aGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACt                                     >  2:2515459/1‑148 (MQ=255)

                                                                                                         aGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACt                                     <  2:1366637/148‑1 (MQ=255)

                                                                                                         aGAAATTGCTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACt                                     <  1:3392662/148‑1 (MQ=255)

                                                                                                            aaTTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCag                                  >  1:4556704/1‑148 (MQ=255)

                                                                                                             aTTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCagg                                 >  1:3591075/1‑148 (MQ=255)

                                                                                                                  tCAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCaggaagga                            >  1:734416/1‑148 (MQ=255)

                                                                                                                   cAATCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGAATAAggaaggaa                           <  2:4283020/148‑1 (MQ=255)

                                                                                                                    aaTCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGaaa                          >  2:3971140/1‑148 (MQ=255)

                                                                                                                     aTCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGaaaa                         <  2:4470567/148‑1 (MQ=255)

                                                                                                                     aTCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGaaaa                         >  1:2148608/1‑148 (MQ=255)

                                                                                                                      tCGTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACTATCTTTAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGaaaaa                        >  2:965961/1‑148 (MQ=255)

                                                                                                                        gTTATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGaaaaaat                      >  1:2002346/1‑147 (MQ=255)

                                                                                                                          tATTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAAttt                    >  2:4074907/1‑148 (MQ=255)

                                                                                                                           aTTTAATAGAGGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAAtttt                   >  1:4196545/1‑148 (MQ=255)

                                                                                                                                  agagGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTaagc            <  2:1018150/148‑3 (MQ=255)

                                                                                                                                  agagGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTaagc            >  1:107901/1‑146 (MQ=255)

                                                                                                                                   gagGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTaagct           <  2:2672245/148‑4 (MQ=255)

                                                                                                                                    agGAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTaagctt          <  2:674400/148‑5 (MQ=255)

                                                                                                                                     ggAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTaagcttc         <  1:4093193/148‑6 (MQ=255)

                                                                                                                                     ggAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTaagcttc         <  1:2681749/148‑6 (MQ=255)

                                                                                                                                      gAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTaagcttca        >  1:506975/1‑142 (MQ=255)

                                                                                                                                      gAATTAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTaagcttca        >  2:2707704/1‑142 (MQ=255)

                                                                                                                                          tAAGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGAt    >  1:2742449/1‑148 (MQ=255)

                                                                                                                                           aaGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATc   <  2:4178105/148‑1 (MQ=255)

                                                                                                                                            aGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATcc  <  2:3822284/148‑1 (MQ=255)

                                                                                                                                            aGGTTCATATATTAAATATTGGTCTTATTGATAATACACCTACTGGTCAGCTGATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAATTTTGCTAAGCTTCATGATcc  <  1:1890703/148‑1 (MQ=255)

AGTTGAACGTCCACAATTTAATTTAGTGCTCAAAAAGTTAACAAATGGCGATACTTTAATTGTGACAAAGTTAGATCGATTAGCCAGGAACACTAAAGAAGTTTTAGAAATTGTTCAATCGTTATTTAATAGAGGAATTAAGGTTTATATATTAAATATTGGACTTATCGATAATACACCGACAGGTCAACTTATTTTTACCATCTTCAGTGCTTTTGCGCAGTTTGAACGAGACCTTATTGTAACCAGGACTCAGGAAGGAAAAAACTTTGCTAAAATCCATGATCC  >  CP043523/1867641‑1867928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`