Predicted mutation
evidence seq id position mutation annotation gene description
RA CP043523 1,847,985 T→A G57G (GGT→GGA)  FTN78_chr1897 → Cold shock protein of CSP family

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0435231,847,9850TA99.8% 1412.6 / NA 417G57G (GGT→GGA) FTN78_chr1897Cold shock protein of CSP family
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (144/271);  minor base G (0/1);  total (144/273)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 417 total aligned reads displayed.

TTAACGCTGACAAAGGCTATGGTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGTCGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCTTTCCCTACAGTTCATAA  >  CP043523/1847840‑1848128
                                                                                                                                                 |                                                                                                                                               
   aCGCTGACAAAGGCTATGGTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTa                                                                                                                                            >  2:694664/1‑148 (MQ=255)
   aCGCTGACAAAGGCTATGGTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTa                                                                                                                                            <  2:1098743/148‑1 (MQ=255)
      cTGACAAAGGCTATGGTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGc                                                                                                                                         >  1:2468674/1‑148 (MQ=255)
       tGACAAAGGCTATGGTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTTAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCt                                                                                                                                        >  2:4116005/1‑148 (MQ=255)
         aCAAAGGCTATGGTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTc                                                                                                                                      >  2:3162954/1‑148 (MQ=255)
         aCAAAGGCTATGGTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTc                                                                                                                                      >  2:3030000/1‑148 (MQ=255)
         aCAAAGGCTATGGTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTc                                                                                                                                      >  2:1762009/1‑148 (MQ=255)
           aaaGGCTATGGTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCaa                                                                                                                                    <  2:453346/148‑1 (MQ=255)
           aaaGGCTATGGTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCaa                                                                                                                                    <  2:4419017/148‑1 (MQ=255)
             aGGCTATGGTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAAc                                                                                                                                  >  1:2444602/1‑148 (MQ=255)
              ggCTATGGTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACg                                                                                                                                 <  1:3139005/148‑1 (MQ=255)
               gCTATGGTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGt                                                                                                                                >  2:906156/1‑148 (MQ=255)
               gCTATGGTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGt                                                                                                                                <  1:2090221/148‑1 (MQ=255)
                 tATGGTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTAc                                                                                                                              >  2:3838464/1‑148 (MQ=255)
                   tGGTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACAt                                                                                                                            >  2:2062160/1‑148 (MQ=255)
                   tGGTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACAt                                                                                                                            >  2:2630648/1‑148 (MQ=255)
                    ggTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATa                                                                                                                           >  2:1247836/1‑148 (MQ=255)
                     gTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATaa                                                                                                                          >  2:557091/1‑148 (MQ=255)
                          attatGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGAt                                                                                                                     <  1:3207851/148‑1 (MQ=255)
                            tatGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATaa                                                                                                                   >  2:1397924/1‑148 (MQ=255)
                             atGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATaaa                                                                                                                  <  2:1000091/148‑1 (MQ=255)
                                  aGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGt                                                                                                             <  1:174556/148‑1 (MQ=255)
                                    atgatATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAACTGCTTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTa                                                                                                           <  2:1351300/148‑1 (MQ=255)
                                       atatGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAg                                                                                                        <  2:1975511/148‑1 (MQ=255)
                                         atGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCa                                                                                                      >  1:4587091/1‑148 (MQ=255)
                                         atGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCa                                                                                                      <  1:1955297/148‑1 (MQ=255)
                                         atGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCa                                                                                                      <  1:1389873/148‑1 (MQ=255)
                                          tGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGATCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCAt                                                                                                     <  2:370574/148‑1 (MQ=255)
                                           gCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATg                                                                                                    <  1:1334744/148‑1 (MQ=255)
                                           gCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATg                                                                                                    >  2:152090/1‑148 (MQ=255)
                                            cAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATgg                                                                                                   <  2:3104627/148‑1 (MQ=255)
                                              aGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATgggg                                                                                                 <  1:3366032/148‑1 (MQ=255)
                                              aGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATgggg                                                                                                 <  1:2518570/148‑1 (MQ=255)
                                               gATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGgt                                                                                                <  2:23462/148‑1 (MQ=255)
                                                  gtgtTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTc                                                                                             >  1:4012230/1‑148 (MQ=255)
                                                   tgtTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTcc                                                                                            <  2:3998842/148‑1 (MQ=255)
                                                     tttGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCtt                                                                                          <  2:4353189/148‑1 (MQ=255)
                                                      ttGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCttt                                                                                         <  1:3858417/148‑1 (MQ=255)
                                                       tGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTg                                                                                        >  2:4568504/1‑148 (MQ=255)
                                                         cttatctcttatctATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCt                                                                                      <  2:2560087/148‑1 (MQ=255)
                                                            atctcttatctATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCtttt                                                                                   <  2:3391532/148‑1 (MQ=255)
                                                            atctcttatctATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCtttt                                                                                   >  2:3616528/1‑148 (MQ=255)
                                                            atctcttatctATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCtttt                                                                                   <  1:2180768/148‑1 (MQ=255)
                                                            atctcttatctATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCtttt                                                                                   <  1:1817861/148‑1 (MQ=255)
                                                              ctcttatctATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCtttttt                                                                                 <  2:2958845/148‑1 (MQ=255)
                                                                cttatctATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTtttat                                                                               <  2:3292851/148‑1 (MQ=255)
                                                                 ttatctATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTtttatt                                                                              <  1:693791/148‑1 (MQ=255)
                                                                    tctATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTttatttat                                                                           <  2:617614/148‑1 (MQ=255)
                                                                    tctATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTttatttat                                                                           <  1:1288554/148‑1 (MQ=255)
                                                                    tctATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTttatttat                                                                           <  1:1523553/148‑1 (MQ=255)
                                                                    tctATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTttatttat                                                                           >  2:2489109/1‑148 (MQ=255)
                                                                        ttCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTtattgct                                                                       >  2:2675168/1‑148 (MQ=255)
                                                                        ttCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTtattgct                                                                       <  1:353962/148‑1 (MQ=255)
                                                                        ttCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTtattgct                                                                       <  1:356083/148‑1 (MQ=255)
                                                                          cAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTtattgctat                                                                     >  2:131828/1‑148 (MQ=255)
                                                                           aGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTtattgctatt                                                                    >  2:2723472/1‑148 (MQ=255)
                                                                             ggAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTtattgctattgc                                                                  <  1:1203927/148‑1 (MQ=255)
                                                                                  tGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCaaaaa                                                             >  1:646006/1‑148 (MQ=255)
                                                                                   gATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAAt                                                            <  1:4261134/148‑1 (MQ=255)
                                                                                   gATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAAt                                                            <  2:2233311/148‑1 (MQ=255)
                                                                                    aTTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATg                                                           <  1:2862424/148‑1 (MQ=255)
                                                                                     ttttAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGa                                                          >  2:346873/1‑148 (MQ=255)
                                                                                      tttAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGaa                                                         <  1:3452398/148‑1 (MQ=255)
                                                                                         aaaaaaTACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTa                                                      <  1:4356094/148‑1 (MQ=255)
                                                                                         aaaaaaTACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTa                                                      >  1:3752271/1‑148 (MQ=255)
                                                                                          aaaaaTACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTaa                                                     <  1:3581280/148‑1 (MQ=255)
                                                                                           aaaaTACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTaaa                                                    <  1:1638888/148‑1 (MQ=255)
                                                                                            aaaTACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTaaaa                                                   <  1:2578570/148‑1 (MQ=255)
                                                                                             aaTACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAAt                                                  <  2:2135910/148‑1 (MQ=255)
                                                                                             aaTACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAAt                                                  <  1:735756/148‑1 (MQ=255)
                                                                                              aTACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATg                                                 <  2:3882413/148‑1 (MQ=255)
                                                                                              aTACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATg                                                 <  2:3078398/148‑1 (MQ=255)
                                                                                                 cGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTta                                              >  2:3761647/1‑148 (MQ=255)
                                                                                                   aTGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTtata                                            >  2:2440753/1‑148 (MQ=255)
                                                                                                    tGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATAc                                           >  1:3035187/1‑148 (MQ=255)
                                                                                                    tGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATAc                                           <  1:535602/148‑1 (MQ=255)
                                                                                                    tGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTAAAAAAAAAAAAATGAATTAAAATGTTATAc                                           <  2:794619/148‑1 (MQ=255)
                                                                                                         gTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACtgagt                                      >  2:2852330/1‑148 (MQ=255)
                                                                                                          tCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACtgagtg                                     >  2:4225942/1‑148 (MQ=255)
                                                                                                            aaaaGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGAAAATAAAAAAATGAATTAAAATGTTATACtgagtgag                                   <  2:4679878/148‑1 (MQ=255)
                                                                                                               aGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGa                                <  1:4312846/148‑1 (MQ=255)
                                                                                                               aGGTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGa                                >  1:2283138/1‑148 (MQ=255)
                                                                                                                ggTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGaa                               >  2:1040851/1‑148 (MQ=255)
                                                                                                                ggTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGaa                               >  2:2306072/1‑148 (MQ=255)
                                                                                                                 gTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGCGGGcaa                              >  2:1182141/1‑148 (MQ=255)
                                                                                                                 gTTACTTTTGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGaaa                              >  1:2726063/1‑148 (MQ=255)
                                                                                                                       tttGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAg                        >  1:3054205/1‑148 (MQ=255)
                                                                                                                        ttGATATCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGt                       <  2:1581199/148‑1 (MQ=255)
                                                                                                                              tCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCttt                 <  1:906156/148‑1 (MQ=255)
                                                                                                                              tCAAAATGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCttt                 <  2:2468674/148‑1 (MQ=255)
                                                                                                                                aaaaTGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCTTTcc               <  2:4051404/148‑1 (MQ=255)
                                                                                                                                aaaaTGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCTTTcc               <  1:2950553/148‑1 (MQ=255)
                                                                                                                                 aaaTGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCTTTccc              <  1:1103023/148‑1 (MQ=255)
                                                                                                                                  aaTGACGTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCTTTCCCt             >  1:4541650/1‑148 (MQ=255)
                                                                                                                                        gTCTCGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCTTTCCCTACAGtt       <  1:3477500/148‑1 (MQ=255)
                                                                                                                                          ctcGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCTTTCCCTACAGTTCa     >  1:794465/1‑148 (MQ=255)
                                                                                                                                          ctcGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCTTTCCCTACAGTTCa     <  1:4212845/148‑1 (MQ=255)
                                                                                                                                          ctcGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCTTTCCCTACAGTTCa     >  1:1010508/1‑148 (MQ=255)
                                                                                                                                            cGTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCTTTCCCTACAGTTCATa   <  1:1559863/148‑1 (MQ=255)
                                                                                                                                             gTGGACGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCTTTCCCTACAGTTCATaa  <  1:3229128/148‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                               
TTAACGCTGACAAAGGCTATGGTTTTATTATGGCAGATGATATGCAAGATGTGTTTGCTTATCTCTTATCTATTCAGGGAAATGATTTTAAAAAATACGATGAAGGTCAAAAGGTTACTTTTGATATCAAAATGACGTCTCGTGGTCGTTATGCTTCAAACGTACATAAAAGATAAATGAGTTAAAGCATGGGGTGTCCTTTGCTTTTTTATTTATTGCTATTGCAAAAATGAATTAAAATGTTATACTGAGTGAGGGAAAGATTAGTTGCTTTCCCTACAGTTCATAA  >  CP043523/1847840‑1848128

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑