| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP043523 | 1,883,197 | T→C | intergenic (+78/‑83) | FTN78_chr1927 → / → FTN78_chr1928 | 3‑ketoacyl‑CoA thiolase, Acetyl‑CoA acetyltransferase/Transposase TnpA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP043523 | 1,883,197 | 0 | T | C | 100.0% | 1540.0 / NA | 421 | intergenic (+78/‑83) | FTN78_chr1927/FTN78_chr1928 | 3‑ketoacyl‑CoA thiolase, Acetyl‑CoA acetyltransferase/Transposase TnpA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (190/231); total (190/231) | |||||||||||
Only 100 of 421 total aligned reads displayed.
ACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCT‑TAGACTCCGATTTGAACACACGACAGTCATGCTCTGTCGTGTTTTACATGTCAATCGTTCCATCAACTATAACTTTATAAACAAGAGGCCTTCGAAGCGTGAAGTAAAAAATCAACGCTTGTGAAAACACCTCCTTGAGATTTATATGAAAGCCAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTA > CP043523/1883056‑1883338 | agagGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTGATGCTCTGTCGTGTATTACATGTCAATCGTTCCACCTACtgta > 2:3660749/1‑148 (MQ=255) ggAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACt > 2:2030293/1‑148 (MQ=255) aagaaAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACttc < 2:4654347/148‑2 (MQ=255) agaaAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACttca < 2:1910829/148‑3 (MQ=255) agaaAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACttca > 2:3267430/1‑146 (MQ=255) agaaAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACttca > 2:2753787/1‑146 (MQ=255) gaaAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTcat < 1:234505/148‑1 (MQ=255) aaTCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATaaa < 1:3270795/148‑1 (MQ=255) aaTCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATaaa > 1:272412/1‑148 (MQ=255) aTCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAAc < 2:913495/148‑1 (MQ=255) tCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACa < 1:1538835/148‑1 (MQ=255) tCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACa < 2:3884184/148‑1 (MQ=255) tCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAgg > 2:2304553/1‑148 (MQ=255) aaaaaaaGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCtt > 1:172089/1‑148 (MQ=255) aaaaaGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCg > 1:2955751/1‑148 (MQ=255) aaaaGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGa < 1:1972581/148‑1 (MQ=255) aaaGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGaa > 1:614449/1‑148 (MQ=255) aaGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAg > 1:4088470/1‑148 (MQ=255) cGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGt < 1:1935384/148‑1 (MQ=255) cGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATATATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGt < 1:4205774/148‑1 (MQ=255) cGAGTGCCATATTCATGCAAAACTACAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACACGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGt < 2:1735491/148‑1 (MQ=255) gAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTg > 1:664254/1‑148 (MQ=255) tGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAg > 1:2744453/1‑148 (MQ=255) tGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAg > 1:4486270/1‑148 (MQ=255) tGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAg < 1:4695313/148‑1 (MQ=255) gCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAATAAGAGGCCTTCGAAGCGTGAAGt < 2:590179/148‑1 (MQ=255) ccATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTa < 2:718479/148‑1 (MQ=255) tatTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTagaa > 1:1822251/1‑145 (MQ=255) ttCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTagaaaa < 2:4584379/148‑1 (MQ=255) ttCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTagaaaa < 2:3959570/148‑1 (MQ=255) ttCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTagaaaa > 1:2836123/1‑148 (MQ=255) tCATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACTTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAAt > 2:1358809/1‑148 (MQ=255) cATGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATc < 1:919292/148‑1 (MQ=255) aTGCAAAACTCCAAGTAAGATTGACAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCa < 2:2410435/148‑1 (MQ=255) tGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCaa < 2:1248287/148‑1 (MQ=255) tGCAAAACTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCaa < 2:215577/148‑1 (MQ=255) aaaaCTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGc < 1:3742730/148‑1 (MQ=255) aaaaCTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGc < 2:776978/148‑1 (MQ=255) aaaaCTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGc < 2:1127604/148‑1 (MQ=255) aaaaCTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGc < 1:3837920/148‑1 (MQ=255) aaCTCCAAGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCtt > 2:853596/1‑148 (MQ=255) aGTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGaaaa < 2:50568/148‑1 (MQ=255) gTAAGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGaaaat > 2:147961/1‑147 (MQ=255) aaGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGaaaatta < 1:532756/148‑4 (MQ=255) aGATTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGaaaattac > 2:3183671/1‑144 (MQ=255) aTTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGaaaattactc > 1:3893452/1‑142 (MQ=255) aTTGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGaaaattactc > 2:4127822/1‑142 (MQ=255) ttGAAAGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGaaaattactcc < 2:1598372/148‑8 (MQ=255) aaGCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTga < 1:1909825/148‑1 (MQ=255) gCCATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTgaga < 2:3722106/148‑1 (MQ=255) ccATCTATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGAt < 1:2126536/148‑1 (MQ=255) ctatAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTtat > 1:2456600/4‑148 (MQ=255) atAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTatat < 1:1775202/147‑1 (MQ=255) atAGACTCCGATTTGAACACACGACAGCTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTatat > 2:2924628/2‑148 (MQ=255) aGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGa > 2:623093/1‑148 (MQ=255) aGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGa < 2:3113401/148‑1 (MQ=255) aGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGa < 1:3349719/148‑1 (MQ=255) aGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGa < 2:2220430/148‑1 (MQ=255) gACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGaa < 2:4402309/148‑1 (MQ=255) gACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGaa < 1:4065722/148‑1 (MQ=255) aCTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGaaa < 1:260123/148‑1 (MQ=255) aCTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGaaa > 2:238614/1‑148 (MQ=255) tCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGc < 1:1222949/148‑1 (MQ=255) ccGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGct > 2:3324711/1‑147 (MQ=255) ccGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGct < 1:106636/148‑2 (MQ=255) cGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGcta < 2:4442543/148‑3 (MQ=255) gATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTaa < 1:795288/148‑1 (MQ=255) aTTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTaag > 1:3306906/1‑148 (MQ=255) ttGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTaagaa > 1:2412990/1‑148 (MQ=255) ttGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTaagaa > 1:2431289/1‑148 (MQ=255) cacacGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTaagaaaagaa < 2:2810379/148‑1 (MQ=255) acacGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAAt < 1:2943519/148‑1 (MQ=255) cGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTgg < 2:1761465/148‑1 (MQ=255) cAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAAc > 2:4332965/1‑148 (MQ=255) gttaTGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACga > 1:3236373/4‑148 (MQ=255) ttaTGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACgag > 1:433006/3‑148 (MQ=255) aTGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGagag < 1:704158/148‑1 (MQ=255) aTGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGagag > 1:1594812/1‑148 (MQ=255) gCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCt > 2:2971817/1‑148 (MQ=255) gCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCt > 2:3523295/1‑148 (MQ=255) ctGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCtttt > 2:3010189/1‑148 (MQ=255) ctGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCtttt < 2:1168007/148‑1 (MQ=255) tCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTaaa < 1:1007244/148‑1 (MQ=255) tCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTaaa > 1:4562863/1‑148 (MQ=255) tgtTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATc < 2:4063273/148‑1 (MQ=255) ttttACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAGCGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCAt > 1:345573/1‑148 (MQ=255) tttACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCAtt > 1:2588326/1‑148 (MQ=255) tttACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCAtt < 2:1630369/148‑1 (MQ=255) tACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCAttct < 2:2594846/148‑1 (MQ=255) tACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCAttct > 1:1501809/1‑148 (MQ=255) tACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCCTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCAttct < 1:1654530/148‑1 (MQ=255) aCATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCAttctt < 2:2954862/148‑1 (MQ=255) aTGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCATtcttct > 1:319211/1‑148 (MQ=255) tGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCATTCTTCTg > 1:4463314/1‑148 (MQ=255) tGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTGGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCATTCTTCTg < 1:3709702/148‑1 (MQ=255) gTCAACCGTGCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCAttcttggag < 2:4232968/148‑5 (MQ=255) tCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCATTCTTCTGCg > 1:2266049/1‑148 (MQ=255) tCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAAGTACTCCTTGAGATTTATATGAAAGCTCAGAAAAGAATTGGAACGAGAGCTTTTAAAATCATTCTTCTGCg < 1:3061301/148‑1 (MQ=255) tCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGAt > 1:995632/1‑148 (MQ=255) gTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGATTTATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTa < 1:2089213/148‑1 (MQ=255) | ACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATCT‑TAGACTCCGATTTGAACACACGACAGTCATGCTCTGTCGTGTTTTACATGTCAATCGTTCCATCAACTATAACTTTATAAACAAGAGGCCTTCGAAGCGTGAAGTAAAAAATCAACGCTTGTGAAAACACCTCCTTGAGATTTATATGAAAGCCAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTA > CP043523/1883056‑1883338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |