Predicted mutation
evidence seq id position mutation annotation gene description
RA CP043523 1,883,418 C→T R47C (CGT→TGT)  FTN78_chr1928 → Transposase TnpA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0435231,883,4180CT100.0% 1664.2 / NA 483R47C (CGT→TGT) FTN78_chr1928Transposase TnpA
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (252/231);  total (252/231)

Only 100 of 483 total aligned reads displayed.

GATTTATATGAAAGCCAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCTGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATAAAACCTCGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCTATAGGAGCTAAGCGACATGTTTATCTCTGTGCT  >  CP043523/1883273‑1883561
                                                                                                                                                 |                                                                                                                                               
   ttATATGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGtttt                                                                                                                                            >  2:2930515/1‑148 (MQ=255)
     atatGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTaa                                                                                                                                          >  1:1678189/1‑148 (MQ=255)
      tatGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTaaa                                                                                                                                         >  2:237137/1‑148 (MQ=255)
       atGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAAt                                                                                                                                        >  1:4457189/1‑148 (MQ=255)
        tGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATc                                                                                                                                       <  1:4127822/148‑1 (MQ=255)
        tGAAAGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATc                                                                                                                                       >  2:3023617/1‑148 (MQ=255)
           aaGCTAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCaaa                                                                                                                                    >  2:3244754/1‑148 (MQ=255)
            agctaagaaaagaaTTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCaaat                                                                                                                                   <  1:623093/144‑1 (MQ=255)
              ctaagaaaagaaTTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCaaataa                                                                                                                                 <  1:3508476/146‑1 (MQ=255)
               taagaaaagaaTTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCaaataaa                                                                                                                                <  2:664389/147‑1 (MQ=255)
                aagaaaagaaTTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCaaataaat                                                                                                                               >  1:2909834/1‑148 (MQ=255)
                 agaaaagaaTTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACCTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAAtc                                                                                                                              <  1:2981752/148‑1 (MQ=255)
                  gaaaagaaTTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAAtct                                                                                                                             <  1:4041686/148‑1 (MQ=255)
                   aaaagaaTTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAAtctc                                                                                                                            >  2:1910392/1‑148 (MQ=255)
                    aaagaaTTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTcc                                                                                                                           >  1:888760/1‑148 (MQ=255)
                       gaaTTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGt                                                                                                                        >  2:2742582/1‑148 (MQ=255)
                        aaTTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTa                                                                                                                       <  2:868200/148‑1 (MQ=255)
                        aaTTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTa                                                                                                                       >  1:3849637/1‑148 (MQ=255)
                         aTTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTAt                                                                                                                      <  1:1872222/148‑1 (MQ=255)
                         aTTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATAAAATAAATCTCCTGTAt                                                                                                                      >  2:4653139/1‑148 (MQ=255)
                          ttGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTAtt                                                                                                                     <  2:4562863/148‑1 (MQ=255)
                           tGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTAttt                                                                                                                    >  1:1468995/1‑148 (MQ=255)
                           tGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTAttt                                                                                                                    >  1:714830/1‑148 (MQ=255)
                              aaCGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTttct                                                                                                                 >  1:2638521/1‑148 (MQ=255)
                                cGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTttcttc                                                                                                               >  1:845394/1‑148 (MQ=255)
                                cGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTttcttc                                                                                                               <  1:3278003/148‑1 (MQ=255)
                                cGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTttcttc                                                                                                               >  1:2693221/1‑148 (MQ=255)
                                   gagCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGa                                                                                                            >  2:3776406/1‑148 (MQ=255)
                                     gCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATa                                                                                                          >  1:155756/1‑148 (MQ=255)
                                        tttAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATc                                                                                                       >  1:4415687/1‑148 (MQ=255)
                                           aaaaTCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGc                                                                                                    <  1:2157590/148‑1 (MQ=255)
                                            aaaTCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCt                                                                                                   <  2:3306906/148‑1 (MQ=255)
                                             aaTCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCt                                                                                                   <  2:392866/147‑1 (MQ=255)
                                                cATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTaaa                                                                                               <  2:3496712/148‑1 (MQ=255)
                                                cATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTaaa                                                                                               <  2:3108054/148‑1 (MQ=255)
                                                cATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTaaa                                                                                               <  1:124366/148‑1 (MQ=255)
                                                  ttcttcTGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACa                                                                                             <  2:3572510/148‑1 (MQ=255)
                                                        tGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAAtt                                                                                       <  2:2106205/148‑1 (MQ=255)
                                                        tGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAAtt                                                                                       >  1:781439/1‑148 (MQ=255)
                                                        tGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAAtt                                                                                       <  1:1323262/148‑1 (MQ=255)
                                                        tGCGTGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAAtt                                                                                       <  1:4210533/148‑1 (MQ=255)
                                                            tGATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAAc                                                                                   <  1:1803914/148‑1 (MQ=255)
                                                             gATTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAAcc                                                                                  >  2:2164306/1‑148 (MQ=255)
                                                              aTTATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAAccc                                                                                 >  1:3697464/1‑148 (MQ=255)
                                                               ttATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCg                                                                                >  1:4698540/1‑148 (MQ=255)
                                                                tATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGa                                                                               >  1:954489/1‑148 (MQ=255)
                                                                tATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGa                                                                               >  2:1127895/1‑148 (MQ=255)
                                                                tATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGa                                                                               <  2:473431/148‑1 (MQ=255)
                                                                tATGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGa                                                                               <  1:4351882/148‑1 (MQ=255)
                                                                 aTGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGaa                                                                              >  1:4319516/1‑148 (MQ=255)
                                                                  tGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAAt                                                                             >  1:2134714/1‑148 (MQ=255)
                                                                  tGGCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAAt                                                                             >  1:2382024/1‑148 (MQ=255)
                                                                   ggCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAAtt                                                                            >  1:3927764/1‑148 (MQ=255)
                                                                    gCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCGAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCACATAAATCTCCTGTATTTTCTTCGGATAATCTGCTTAAACAAGAATTTAACCCGAATTc                                                                           <  2:1672403/148‑1 (MQ=255)
                                                                    gCGTTAATATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTc                                                                           >  1:2927847/1‑148 (MQ=255)
                                                                         aaTATTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCaa                                                                      >  1:503639/1‑148 (MQ=255)
                                                                          atatTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCaaa                                                                     >  2:4029330/1‑148 (MQ=255)
                                                                           tatTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAAt                                                                    >  1:4603802/1‑148 (MQ=255)
                                                                           tatTTCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAAt                                                                    >  1:1387884/1‑148 (MQ=255)
                                                                               tCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAg                                                                <  2:2588326/148‑1 (MQ=255)
                                                                               tCTGAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAg                                                                <  1:1062044/148‑1 (MQ=255)
                                                                                  gAAGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTGCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGttt                                                             >  2:1371236/1‑148 (MQ=255)
                                                                                    aGGCCGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTgg                                                           >  2:3849592/1‑148 (MQ=255)
                                                                                     ggccgTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGa                                                          >  2:2895777/5‑148 (MQ=255)
                                                                                            tCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGa                                                   >  2:2256166/1‑148 (MQ=255)
                                                                                            tCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGa                                                   >  2:4365545/1‑148 (MQ=255)
                                                                                              ttAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGAtt                                                 >  2:3201120/1‑148 (MQ=255)
                                                                                                   aCTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACt                                            >  1:1219554/1‑148 (MQ=255)
                                                                                                     ttCTCAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTta                                          <  2:1411022/148‑1 (MQ=255)
                                                                                                      tctcAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTtat                                         <  2:2431215/148‑1 (MQ=255)
                                                                                                         cAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACtt                                           <  1:2485843/143‑1 (MQ=255)
                                                                                                         cAAGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATAtc                                      >  1:1024921/1‑148 (MQ=255)
                                                                                                          aaGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATAtct                                     >  1:3649498/1‑148 (MQ=255)
                                                                                                          aaGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATAtct                                     <  1:1639638/148‑1 (MQ=255)
                                                                                                          aaGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATAtct                                     <  2:2017682/148‑1 (MQ=255)
                                                                                                           aGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCACATCAAGTTTGGACAACAGATTTCACTTATAtctc                                    <  1:3632401/148‑1 (MQ=255)
                                                                                                           aGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATAtctc                                    >  2:2451082/1‑148 (MQ=255)
                                                                                                           aGTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATAtctc                                    <  1:3432798/148‑1 (MQ=255)
                                                                                                            gTCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATctct                                   >  2:92655/1‑148 (MQ=255)
                                                                                                             tCTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCta                                  <  2:345573/148‑1 (MQ=255)
                                                                                                              cTATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCtat                                 <  2:4110775/148‑1 (MQ=255)
                                                                                                               tATGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCtata                                <  2:3347733/148‑1 (MQ=255)
                                                                                                                aTGACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCTATAg                               >  1:3573805/1‑148 (MQ=255)
                                                                                                                  gACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCTATAGGa                             >  1:3167265/1‑148 (MQ=255)
                                                                                                                  gACACTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCTATAGGa                             >  1:1188297/1‑148 (MQ=255)
                                                                                                                   acacTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTTGACAACAGATTTCACTTATATCTCTATAGGAg                            <  2:4510190/148‑1 (MQ=255)
                                                                                                                   acacTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCTATAGGAg                            <  1:3023617/148‑1 (MQ=255)
                                                                                                                    cacTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCTATAGGAGc                           <  1:2886137/148‑1 (MQ=255)
                                                                                                                    cacTCCCTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCTATAGGAGc                           <  1:3244754/148‑1 (MQ=255)
                                                                                                                          cTAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCTATAGGAGCTAAGCg                     >  1:4566236/1‑148 (MQ=255)
                                                                                                                           tAAAATGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCTATAGGAGCTAAGCGa                    >  1:1138058/1‑148 (MQ=255)
                                                                                                                            aaaaTGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCTATAGGAGCTAAGCGAc                   >  1:2072839/1‑148 (MQ=255)
                                                                                                                               aTGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCTATAGGAGCTAAGCGACATg                <  1:1933825/148‑1 (MQ=255)
                                                                                                                                tGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCTATAGGAGCTAAGCGACATGt               <  2:1213637/148‑1 (MQ=255)
                                                                                                                                tGTCAACCATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCTATAGGAGCTAAGCGACATGt               <  2:755067/148‑1 (MQ=255)
                                                                                                                                      ccATCAAACCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCTATAGGAGCTAAGCGACATGTTTAtct         <  2:1764908/148‑1 (MQ=255)
                                                                                                                                         tcaaaCCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCTATAGGAGCTAAGCGACATGTTTATCTCtg      <  1:2214549/146‑1 (MQ=255)
                                                                                                                                          caaaCCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCTATAGGAGCTAAGCGACATGTTTATCTCtgt     <  2:508119/147‑1 (MQ=255)
                                                                                                                                          caaaCCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCTATAGGAGCTAAGCGACATGTTTATCTCtgt     <  2:4182468/147‑1 (MQ=255)
                                                                                                                                             aCCTTGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCTATAGGAGCTAAGCGACATGTTTATCTCTGTGCt  <  2:249662/148‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                               
GATTTATATGAAAGCCAAGAAAAGAATTGGAACGAGAGCTTTTAAAATCATTCTTCTGCGTGATTATGGCGTTAATATTTCTGAAGGCTGTATCTTAAGACTTCTCAAGTCTATGACACTCCCTAAAATGTCAACCATAAAACCTCGTTTTAAATCAAATAAATCTCCTGTATTTTCTTCTGATAATCTGCTTAAACAAGAATTTAACCCGAATTCCCCAAATCAAGTTTGGACAACAGATTTCACTTATATCTCTATAGGAGCTAAGCGACATGTTTATCTCTGTGCT  >  CP043523/1883273‑1883561

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑