BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP043523	1,883,656	C→A	intergenic (+59/‑95)	FTN78_chr1928 → / → FTN78_chr1929	Transposase TnpA/Transposase TnpA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP043523	1,883,656	0	C	A	100.0%	1801.0 / NA	526	intergenic (+59/‑95)	FTN78_chr1928/FTN78_chr1929	Transposase TnpA/Transposase TnpA
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (284/242); total (284/242)

Only 100 of 533 total aligned reads displayed.

GATTTCACTTATATCTCTATAGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGAAAAGTAAGTGATAGGATTGA‑TGCCAAAC‑TCGCCTGTGATACCTTAGAAATAGCTATAACTAAGAGGAAGCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCCTATGATAATGCCGTCA  >  CP043523/1883511‑1883799

gATTTCACTTATATCTCTATAGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATa                                                                                                                                                     >  2:2488082/1‑148 (MQ=255)

gATTTCACTTATATCTCTATAGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATa                                                                                                                                                     <  2:2149285/148‑1 (MQ=255)

   ttCACTTATATCTCTATAGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAaga                                                                                                                                                  >  1:2034231/1‑148 (MQ=255)

    tCACTTATATCTCTATAGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAagag                                                                                                                                                 >  2:2709101/1‑148 (MQ=255)

      aCTTATATCTCTATAGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCAACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGa                                                                                                                                               <  1:2577132/148‑1 (MQ=255)

           tatCTCTATAGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCt                                                                                                                                          >  2:3431340/1‑148 (MQ=255)

            atCTCTATAGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTa                                                                                                                                         <  1:2451082/148‑1 (MQ=255)

                  ataGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAAc                                                                                                                                   >  1:3137384/1‑148 (MQ=255)

                  ataGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAAc                                                                                                                                   >  1:508113/1‑148 (MQ=255)

                  ataGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAAc                                                                                                                                   >  1:2351506/1‑148 (MQ=255)

                   taGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAAcc                                                                                                                                  >  2:1903174/1‑148 (MQ=255)

                    aGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCa                                                                                                                                 >  2:1934649/1‑148 (MQ=255)

                       aGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAAtt                                                                                                                              <  2:1222545/148‑1 (MQ=255)

                         cTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTAt                                                                                                                            <  2:2910008/148‑1 (MQ=255)

                          tAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATc                                                                                                                           >  1:4162359/1‑148 (MQ=255)

                            aGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCtt                                                                                                                         >  1:2864924/1‑148 (MQ=255)

                              cGACATGTTGATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTc                                                                                                                       >  2:431265/1‑148 (MQ=255)

                                aCATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCAt                                                                                                                     >  1:4068229/1‑148 (MQ=255)

                                   tGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGATTTTCAAACTTCGCAACAGA‑ACC‑‑‑GAAATAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGa                                                                                                                >  2:3601234/1‑148 (MQ=255)

                                     tttATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGa                                                                                                                <  1:3049297/148‑1 (MQ=255)

                                           tctGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAgg                                                                                                          <  1:4480350/148‑1 (MQ=255)

                                              gtgCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAg                                                                                                       <  2:161172/148‑1 (MQ=255)

                                              gtgCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAg                                                                                                       >  2:518547/1‑148 (MQ=255)

                                              gtgCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAg                                                                                                       <  2:3701376/148‑1 (MQ=255)

                                                gatATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAATC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGcc                                                                                                     <  1:3334309/146‑1 (MQ=255)

                                                  tATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCaa                                                                                                   <  1:1860885/148‑1 (MQ=255)

                                                  tATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCaa                                                                                                   <  2:1158753/148‑1 (MQ=255)

                                                   aTTCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAt                                                                                                  >  2:414014/1‑148 (MQ=255)

                                                    ttCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAt‑t                                                                                                >  2:2318243/1‑148 (MQ=255)

                                                    ttCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAt‑t                                                                                                >  2:30973/1‑148 (MQ=255)

                                                     tCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAt‑tt                                                                                               >  1:4357144/1‑148 (MQ=255)

                                                     tCTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAt‑tt                                                                                               <  1:1952795/148‑1 (MQ=255)

                                                      cTTGACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTa                                                                                              >  2:3001615/1‑148 (MQ=255)

                                                         gACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAAt                                                                                           <  2:3825862/148‑1 (MQ=255)

                                                         gACCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAAt                                                                                           >  2:4560229/1‑148 (MQ=255)

                                                          aCCTCTACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATc                                                                                          <  2:830989/148‑1 (MQ=255)

                                                            ctctACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAg                                                                                        <  1:761334/148‑1 (MQ=255)

                                                            ctctACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAg                                                                                        <  2:4240579/148‑1 (MQ=255)

                                                            ctctACTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAg                                                                                        >  2:1495148/1‑148 (MQ=255)

                                                                aCTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTc                                                                                  >  1:4186626/1‑148 (MQ=255)

                                                                aCTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTc                                                                                  >  2:1847344/1‑148 (MQ=255)

                                                                aCTCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTc                                                                                  >  2:755756/1‑148 (MQ=255)

                                                                 cgcAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTCAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTc‑‑‑c                                                                              <  2:3528721/146‑1 (MQ=255)

                                                                  tCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑Ct                                                                             <  2:1465025/148‑1 (MQ=255)

                                                                  tCAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑Ct                                                                             <  1:3776919/148‑1 (MQ=255)

                                                                   cAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑Ctt                                                                            <  2:2072839/148‑1 (MQ=255)

                                                                   cAAGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑Ctt                                                                            <  1:2234040/148‑1 (MQ=255)

                                                                    aaGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑Cttt                                                                           >  2:1756654/1‑148 (MQ=255)

                                                                     aGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTc‑‑‑c                                                                              >  2:4490519/1‑144 (MQ=255)

                                                                     aGGAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTa                                                                          >  1:2400880/1‑148 (MQ=255)

                                                                       gAAATGTATTGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGa                                                                        <  2:2853342/148‑1 (MQ=255)

                                                                                tGCGTGGAAAGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGttatta                                                               <  1:1331320/148‑1 (MQ=255)

                                                                                    tggaaaGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATg                                                           >  1:1632881/4‑148 (MQ=255)

                                                                                    tggaaaGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATg                                                           <  1:3953381/145‑1 (MQ=255)

                                                                                     ggaaaGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGa                                                          >  2:2248298/3‑148 (MQ=255)

                                                                                       aaaGTAAGTGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGc                                                        <  2:219247/148‑1 (MQ=255)

                                                                                         agtaagtGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCAt                                                      >  1:4659024/1‑148 (MQ=255)

                                                                                          gtaagtGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCGGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATc                                                     <  1:1745391/148‑1 (MQ=255)

                                                                                          gtaagtGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATc                                                     <  2:295989/148‑1 (MQ=255)

                                                                                           taagtGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCa                                                    <  1:4550844/148‑1 (MQ=255)

                                                                                            aagtGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCaa                                                   >  2:3757875/1‑148 (MQ=255)

                                                                                            aagtGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCaa                                                   >  1:4285900/1‑148 (MQ=255)

                                                                                             agtGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAAt                                                  <  2:1138058/148‑1 (MQ=255)

                                                                                             agtGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAAt                                                  <  2:4701646/148‑1 (MQ=255)

                                                                                               tgatcgaaTTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAAttg                                                >  2:4405695/8‑148 (MQ=255)

                                                                                               tGATCGAATTGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAAttg                                                <  2:3225441/148‑1 (MQ=255)

                                                                                                       ttGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGcttc                                        >  1:3904470/1‑148 (MQ=255)

                                                                                                        tGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGcttct                                       <  1:3589459/148‑1 (MQ=255)

                                                                                                        tGA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGcttct                                       >  1:1215340/1‑148 (MQ=255)

                                                                                                         gA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACTAATTATCTATCATTAAGATCATGGTAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTATAGAAAGTGATTAGATGAGCAGCAATTACTTGcttctt                                      >  2:1005260/1‑148 (MQ=255)

                                                                                                         gA‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGcttctt                                      <  1:710406/148‑1 (MQ=255)

                                                                                                          a‑TGCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTA                                     >  2:761802‑M1/1‑148 (MQ=255)

                                                                                                             gCCAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACT                                   <  1:1165032‑M1/148‑1 (MQ=255)

                                                                                                              ccAAAC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTC                                  <  1:915703‑M1/148‑1 (MQ=255)

                                                                                                                aaaC‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCA                                >  1:2972062‑M1/1‑148 (MQ=255)

                                                                                                                   c‑TCGCCTGCGACACCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttc                             >  2:653377‑M1/1‑145 (MQ=255)

                                                                                                                         ctgcgacaccttagaAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaa                        >  2:1039699‑M1/8‑140 (MQ=255)

                                                                                                                         ctgcgacaccttagaAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaa                        >  2:3343707‑M1/8‑140 (MQ=255)

                                                                                                                          tgcgacaccttagAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaag                       >  1:2645874‑M1/7‑139 (MQ=255)

                                                                                                                          tgcgacaccttagAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaag                       <  2:4013992‑M1/142‑10 (MQ=255)

                                                                                                                               cagaaccgAAATAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAA‑TCAACT‑AGCAATTCGGGTTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGata                      <  1:1008594/141‑1 (MQ=255)

                                                                                                                               cacCTTAGAAATAGCTATAAATAAGAGGAATCCTAAGAAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaa                  <  2:1326979‑M1/147‑15 (MQ=255)

                                                                                                                                 gaaccgAAATAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAA‑TCAACT‑AGCAATTCGGGTTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATc                    <  2:3850625/143‑1 (MQ=255)

                                                                                                                                 ccTTAGAAATAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaact                >  1:4617265‑M1/1‑132 (MQ=255)

                                                                                                                                  aaccgAAATAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAA‑TCAACT‑AGCAATTCGGGTTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATcc                   >  1:2751637/5‑148 (MQ=255)

                                                                                                                                     cgAAATAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTG‑‑AATAATCAACTAGCAATTCGGGTTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTa                <  2:2819122/147‑1 (MQ=255)

                                                                                                                                      gAAATAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAA‑TCAACT‑AGCAATTCGGGTTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTAt               <  1:95435/148‑1 (MQ=255)

                                                                                                                                      gAAATAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAA‑TCAACT‑AGCAATTCGGGTTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTAt               >  1:1924066/1‑148 (MQ=255)

                                                                                                                                       aaaTAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaactctcttg          >  2:1402371‑M1/1‑126 (MQ=255)

                                                                                                                                       aaaTAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAA‑TCAACT‑AGCAATTCGGGTTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATg              >  1:2477674/1‑148 (MQ=255)

                                                                                                                                       aaaTAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAA‑TCAACT‑AGCAATTCGGGTTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATg              <  1:4020959/148‑1 (MQ=255)

                                                                                                                                       aaaTAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAA‑TCAACT‑AGCAATTCGGGTTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATg              >  2:1075845/1‑148 (MQ=255)

                                                                                                                                        aaTAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAA‑TCAACT‑AGCAATTCGGGTTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGa             >  1:3451872/1‑148 (MQ=255)

                                                                                                                                        aaTAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAA‑TCAACT‑AGCAATTCGGGTTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGa             >  1:2520322/1‑148 (MQ=255)

                                                                                                                                        aaTAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAA‑TCAACT‑AGCAATTCGGGTTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGa             >  1:1438075/1‑148 (MQ=255)

                                                                                                                                         aTAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaactctcttgct        <  1:3233618‑M1/148‑25 (MQ=255)

                                                                                                                                         aTAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAA‑TCAACT‑AGCAATTCGGGTTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGAt            <  1:586006/148‑1 (MQ=255)

                                                                                                                                          tAGCTATAAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaactctcttgc         <  1:2167954‑M1/146‑24 (MQ=255)

                                                                                                                                              tataAATAAGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaactctcttgctttgaa   >  2:3933901‑M1/1‑119 (MQ=255)

                                                                                                                                               ataaataaGAGGAATCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAttcaagaagttcaactctcttgctttgaat  <  1:3676981‑M1/148‑31 (MQ=255)

GATTTCACTTATATCTCTATAGGAGCTAAGCGACATGTTTATCTCTGTGCTATTCTTGACCTCTACTCAAGGAAATGTATTGCGTGAAAAGTAAGTGATAGGATTGA‑TGCCAAAC‑TCGCCTGTGATACCTTAGAAATAGCTATAACTAAGAGGAAGCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAAT‑TTAAATCAGC‑‑TTC‑‑‑CTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCCTATGATAATGCCGTCA  >  CP043523/1883511‑1883799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`