BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP043523	1,883,783	C→T	P11P (CCC→CCT)	FTN78_chr1929 →	Transposase TnpA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP043523	1,883,783	0	C	T	99.8%	2197.1 / NA	637	P11P (CCC→CCT)	FTN78_chr1929	Transposase TnpA
Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (307/329); minor base G (0/1); total (307/330)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 637 total aligned reads displayed.

GAAATAGCTATAACTAAGAGGAAGCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCCTATGATAATGCCGTCACTGATGTCTTTTTCAAGTATCTTAAACAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCC  >  CP043523/1883643‑1883927

gAAATAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAATCAACT‑AGCAATTCGGGT‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTAt                                                                                                                                               <  1:95435/148‑1 (MQ=255)

   aTAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAATCAACT‑AGCAATTCGGGT‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGAt                                                                                                                                            >  1:4174605/1‑148 (MQ=255)

    tAGCTATAAATAAGAGGAAACCTAAGGAACCAATTATTTTTCATTCGGATCATGGCTGAATAATCAACT‑AGCAATTC‑‑‑GGGTTTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATa                                                                                                                                           >  1:3190392/1‑148 (MQ=255)

                                                                                  ttcgggttttAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCaa                                                                 >  2:1898058/8‑148 (MQ=255)

                                                                                  ttcgggttttAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCaa                                                                 >  2:3647819/8‑148 (MQ=255)

                                                                                   tcgggttttAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCaag                                                                >  1:1593962/7‑148 (MQ=255)

                                                                                     gggttttAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCaagaa                                                              <  1:2596862/144‑1 (MQ=255)

                                                                                      ggttttAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCaagaag                                                             <  1:219397/145‑1 (MQ=255)

                                                                                           tAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCaa                                                        >  2:3326375/1‑148 (MQ=255)

                                                                                               aaGTTATTAGATGATCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAActct                                                    <  2:1444992/148‑1 (MQ=255)

                                                                                                aGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCACGTATCTTAAACCTCGAGCAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAActctc                                                   <  1:711891/148‑1 (MQ=255)

                                                                                                 gTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAActctct                                                  <  1:2660908/148‑1 (MQ=255)

                                                                                                  ttattaGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCtt                                                 >  1:1968021/1‑148 (MQ=255)

                                                                                                     ttaGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCt                                              <  1:3085976/148‑1 (MQ=255)

                                                                                                     ttaGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCt                                              >  2:1524860/1‑148 (MQ=255)

                                                                                                      taGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCtt                                             >  1:1824972/1‑148 (MQ=255)

                                                                                                      taGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCtt                                             >  2:2758200/1‑148 (MQ=255)

                                                                                                           gAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAAt                                        >  1:3606416/1‑148 (MQ=255)

                                                                                                           atatttgaaTTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAAt                                        <  1:3821040/141‑1 (MQ=255)

                                                                                                            tatttgaaTTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATa                                       >  1:1267555/7‑148 (MQ=255)

                                                                                                             gCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATAc                                      <  2:4677486/148‑1 (MQ=255)

                                                                                                              tttgaaTTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACa                                     <  2:898665/144‑1 (MQ=255)

                                                                                                              tttgaaTTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACa                                     <  2:2608572/144‑1 (MQ=255)

                                                                                                              cATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCCTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACa                                     >  1:58111/1‑148 (MQ=255)

                                                                                                               ttgaaTTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACAt                                    <  2:2257482/145‑1 (MQ=255)

                                                                                                                tCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATc                                   <  1:2046280/148‑1 (MQ=255)

                                                                                                                  aaTTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGa                                 <  1:791362/148‑1 (MQ=255)

                                                                                                                  aaTTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGa                                 >  1:2331027/1‑148 (MQ=255)

                                                                                                                   cttgcttgcTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGaa                                <  1:4636774/147‑1 (MQ=255)

                                                                                                                   aTTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGaa                                <  1:10194/148‑1 (MQ=255)

                                                                                                                   aTTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGaa                                <  2:1793016/148‑1 (MQ=255)

                                                                                                                   aTTGCTTGCTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATCCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGaa                                >  2:3397330/1‑148 (MQ=255)

                                                                                                                    ttgcttgcTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAAc                               >  2:3493435/1‑148 (MQ=255)

                                                                                                                    ttgcttgcTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAAc                               <  2:3590455/148‑1 (MQ=255)

                                                                                                                    ttgcttgcTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAAc                               >  1:3903977/1‑148 (MQ=255)

                                                                                                                    ttgcttgcTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAAc                               <  1:2100375/148‑1 (MQ=255)

                                                                                                                    ttgcttgcTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAAc                               <  1:3714310/148‑1 (MQ=255)

                                                                                                                    ttgcttgcTTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAAc                               <  2:4256997/148‑1 (MQ=255)

                                                                                                                     tgcttgctTCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACa                              >  1:19307/1‑148 (MQ=255)

                                                                                                                      gcttgcttCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACaa                             >  2:752199/1‑148 (MQ=255)

                                                                                                                      gcttgcttCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACaa                             <  1:1060684/148‑1 (MQ=255)

                                                                                                                      gcttgcttCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACaa                             <  2:4138873/148‑1 (MQ=255)

                                                                                                                        ttgcttCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAAtt                           <  2:2127686/148‑1 (MQ=255)

                                                                                                                        ttgcttCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAAtt                           >  1:2431563/1‑148 (MQ=255)

                                                                                                                        cgatttcttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAAtt                           >  2:351419/5‑148 (MQ=255)

                                                                                                                          gcttCTTACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAAtttt                         <  2:941145/148‑1 (MQ=255)

                                                                                                                           cttcttACTCCTAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTta                        <  2:133082/148‑1 (MQ=255)

                                                                                                                           cttcttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTta                        >  1:149412/1‑148 (MQ=255)

                                                                                                                           cttcttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTta                        <  2:3851687/148‑1 (MQ=255)

                                                                                                                           cttcttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTAAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTta                        <  1:4554304/148‑1 (MQ=255)

                                                                                                                            ttcttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTtat                       <  2:1233894/148‑1 (MQ=255)

                                                                                                                            ttcttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTtat                       <  1:3394095/148‑1 (MQ=255)

                                                                                                                            ttcttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTtat                       <  1:3360077/148‑1 (MQ=255)

                                                                                                                            ttcttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTtat                       <  2:2484209/148‑1 (MQ=255)

                                                                                                                            ttcttACTCCAAGCCTGGATATCCGTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTtat                       <  1:1140415/148‑1 (MQ=255)

                                                                                                                             tcttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTtata                      >  2:406331/1‑148 (MQ=255)

                                                                                                                             tcttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTtata                      >  1:1402607/1‑148 (MQ=255)

                                                                                                                             tcttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTtata                      >  1:2736220/1‑148 (MQ=255)

                                                                                                                             tcttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTtata                      >  1:289827/1‑148 (MQ=255)

                                                                                                                             tcttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTtata                      <  1:442727/148‑1 (MQ=255)

                                                                                                                              cttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATaa                     >  1:251137/1‑148 (MQ=255)

                                                                                                                              cttACTACAATGCTGGATAGCCTGATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCACAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATaa                     <  2:1680482/148‑1 (MQ=255)

                                                                                                                               ttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAAc                    >  2:2843424/1‑148 (MQ=255)

                                                                                                                               ttACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTCGCTTTGAATACATCGAACAATTTTATAAc                    >  1:3982764/1‑148 (MQ=255)

                                                                                                                                tACTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACa                   <  1:4334695/148‑1 (MQ=255)

                                                                                                                                 aCTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACaa                  <  1:4036141/148‑1 (MQ=255)

                                                                                                                                  cTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAAt                 <  2:4292173/148‑1 (MQ=255)

                                                                                                                                  cTCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAAt                 >  2:3137167/1‑148 (MQ=255)

                                                                                                                                   tCCAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAAtt                >  2:2343678/1‑148 (MQ=255)

                                                                                                                                    ccAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATta               <  2:3451872/148‑1 (MQ=255)

                                                                                                                                     cAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATtat              >  1:1671080/1‑148 (MQ=255)

                                                                                                                                     cAAGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATtat              >  2:1044333/1‑148 (MQ=255)

                                                                                                                                      aaGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATtata             <  1:2019342/148‑1 (MQ=255)

                                                                                                                                      aaGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATtata             >  2:4453847/1‑148 (MQ=255)

                                                                                                                                      aaGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATtata             >  2:3221570/1‑148 (MQ=255)

                                                                                                                                       aGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATaa            >  2:1976131/1‑148 (MQ=255)

                                                                                                                                       aGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATaa            <  2:3190392/148‑1 (MQ=255)

                                                                                                                                       aGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATaa            <  2:3992215/148‑1 (MQ=255)

                                                                                                                                       aGCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCCTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATaa            <  2:4570113/148‑1 (MQ=255)

                                                                                                                                        gCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAAt           <  1:863757/148‑1 (MQ=255)

                                                                                                                                        gCCTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAAt           <  2:672047/148‑1 (MQ=255)

                                                                                                                                         ccTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATc          >  1:2807833/1‑148 (MQ=255)

                                                                                                                                          cTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATcc         >  2:534297/1‑148 (MQ=255)

                                                                                                                                          cTGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATcc         <  2:272699/148‑1 (MQ=255)

                                                                                                                                           tGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCt        >  1:2915648/1‑148 (MQ=255)

                                                                                                                                           tGGATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCt        <  2:1591743/148‑1 (MQ=255)

                                                                                                                                            ggATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTc       >  1:4703382/1‑148 (MQ=255)

                                                                                                                                            ggATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTc       <  1:2983921/148‑1 (MQ=255)

                                                                                                                                            ggATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTc       >  1:1319973/1‑148 (MQ=255)

                                                                                                                                            ggATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTc       >  1:4357739/1‑148 (MQ=255)

                                                                                                                                             gATATCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCa      >  1:2371653/1‑148 (MQ=255)

                                                                                                                                              atatCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCAt     <  2:3047970/148‑1 (MQ=255)

                                                                                                                                              atatCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCAt     >  2:3743263/1‑148 (MQ=255)

                                                                                                                                               tatCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCAtt    <  1:351103/148‑1 (MQ=255)

                                                                                                                                               tatCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCAtt    <  2:3822920/148‑1 (MQ=255)

                                                                                                                                               tatCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCAtt    >  1:3566606/1‑148 (MQ=255)

                                                                                                                                               tatCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCAtt    >  2:1135562/1‑148 (MQ=255)

                                                                                                                                                atCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAACATCGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTc   <  1:343876/148‑1 (MQ=255)

                                                                                                                                                atCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTc   <  1:1433002/148‑1 (MQ=255)

                                                                                                                                                 tCCTTATGATAATGCCGTCACTGAGGTCTTTTTCAAGTATCTTAAAAAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTcc  >  2:2899100/1‑148 (MQ=255)

GAAATAGCTATAACTAAGAGGAAGCCTAAGGAACCAATTATCTTTCATTCGGATCAAGGAAGCCAATTTAAATCAGC‑‑TTC‑‑‑C‑‑‑TTTAGAAAGTTATTAGATGAGCATCAATTGCTTGCTTCTTACTCCAAGCCTGGATATCCCTATGATAATGCCGTCACTGATGTCTTTTTCAAGTATCTTAAACAACGAGAAATTAATCGCAGAACTTATCACTCCATTCAAGAAGTTCAACTCTCTTGCTTTGAATACATCGAACAATTTTATAACAATTATAATCCTCATTCC  >  CP043523/1883643‑1883927

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`