New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1979270NA (NA)17 (0.750) 12/382 0.8 32.1% noncoding (1/768 nt) IS1 repeat region
?NC_000913 = 3853475 36 (1.590)intergenic (‑218/‑78) istR/tisB small RNA IstR‑2/membrane‑depolarizing toxin TisB

AAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGTGCATAGTTGAGTATCGATCACAGTTTGCGTTTTGTCCAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGGAGACGCGTATGAACCTGGTGGATATCGCCATTCTTATCCTCAAACTCATTGTTGCAGCACTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACG  >  NC_000913/3853198‑3853730
                                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                               
aaGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGTGCATAGTTGAGTATCGATCACAGTTTGCGTTTTGTCCAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATAggtg                                                                                                                                                                                                                                                             >  1:346229‑M2/1‑278 (MQ=255)
           ttCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGTGCATAGTTGAGTATCGATCACAGTTTGCGTTTTGTCCAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATTCTGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTTAGCACACTGTGTTATGTCAAAAAGCACAACGTTTCTCCTTGAGATACCGCGTGCacaaca                                                                                                                                                                                                                                                   >  1:329475/1‑281 (MQ=255)
           ttCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGTGCATAGTTGAGTATCGATCACAGTTTGCGTTTTGTCCAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAg                                                                                                                                                                                                                                                  >  1:371938/1‑282 (MQ=255)
               gcgcAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGTGCATAGTTGAGTATCGATCACAGTTTGCGTTTTGTCCAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTgg                                                                                                                                                                                                                                              <  1:318939/282‑1 (MQ=255)
                                                              aGTTGAGTATCGATCACAGTTTGCGTTTTGTCCAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACATTGTGTTATGTCAACAAGAACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGAGGAAAGGAACGTCAGCTGGCAGTGCTCCTGACCcac                                                                                                                                                                                               >  1:298186/1‑282 (MQ=255)
                                                                  gAGTATCGATCACAGTTTGCGTTTTGTCCAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTc                                                                                                                                                                                                        <  1:209227/269‑1 (MQ=255)
                                                                       tCGATCACAGTTTGCGTTTTGTCCAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcca                                                                                                                                                                                                          >  1:300493‑M2/1‑207 (MQ=255)
                                                                          aTCACAGTTTGCGTTTTGTCCAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCATGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGGAGAagc                                                                                                                                                                                      >  1:340158/1‑279 (MQ=255)
                                                                           tCACAGTTTTCGTTTTGTCCAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGGAGACGCGTa                                                                                                                                                                                   <  1:184911/281‑1 (MQ=255)
                                                                                     agaggggTCAAAATTTTTCTCTTTATTTATACAGTAAACGTCTATAATATCCCTGTACGCAATGGGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACAGTGTTATGTCAACAAGAACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGGAGAcg                                                                                                                                                                                       <  2:308209/261‑1 (MQ=255)
                                                                                                                       tAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaag                                                                                                                                      <  1:229363‑M2/282‑124 (MQ=255)
                                                                                                                               tataATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGc                                                                                                                                                                                                          >  1:145986/1‑206 (MQ=255)
                                                                                                                                            tACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGgaga                                                                                                                                                                                         <  2:57570/210‑1 (MQ=255)
                                                                                                                                            tACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGgaga                                                                                                                                                                                         >  1:57570/1‑210 (MQ=255)
                                                                                                                                              cGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCgg                                                                                                                                                                                                                                 >  2:65518/1‑168 (MQ=255)
                                                                                                                                              cGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCgg                                                                                                                                                                                                                                 <  1:65518/168‑1 (MQ=255)
                                                                                                                                              cGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAACGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGGAGACGCGTATGAACCTGGTGGATATCGCCATTCTTATCCTCAAACTCATTGTTGCAGCACTGCAACTGCTTGATGCt                                                                                                               >  1:158894/1‑282 (MQ=255)
                                                                                                                                                cAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGGAGACGCGTATGAACCTGGTGGATATCGCCATTCTTATCCTCAAACTCATTGTTgcag                                                                                                                                   <  1:141739/260‑1 (MQ=255)
                                                                                                                                                              ggggCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCGTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGGAGACGCGTATGAACCTGGTGGATATCGCCATTCTTATCCTCAAACTCAt                                                                                                                                           <  1:382963/238‑1 (MQ=255)
                                                                                                                                                                           tACCCGGCGCACTAAGTCCTGGCTGAAGCGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACCGTGTCATGTCAGCAAGCACAACCGTTCTCCTCGCGATACCGCGTGCACGAAAGCTGACAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCGCCTGAACCACAGGAGACGCGTATGAACCTGGTGGATATAGCCATTCTTATCCTCAAACTCAgtgt                                                                                                                                        >  1:105925/1‑228 (MQ=255)
                                                                                                                                                                                              tGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTAAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGGAGACGCGTATGAACCTGGTGGATATCGCCATTCTTATCCTCAAACTCATTGTTGCAGCACTGCAACTGCTGGATGCTGTTCTGAAATACCTGAAGGAATGCAGATTCAAGTCGCACCAAAgggca                                                               >  1:209020/1‑280 (MQ=255)
                                                                                                                                                                                               ggCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACcgcg                                                                                                                                                                                                                                                            <  1:64769/92‑1 (MQ=255)
                                                                                                                                                                                               ggCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACcgcg                                                                                                                                                                                                                                                            >  2:64769/1‑92 (MQ=255)
                                                                                                                                                                                                                    cAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGCGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGGAGACGCGTATGAACCTGGTGGATATCGCCATTCTTATCCTCAAACTCATTGTGGCAGCACTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCtttt                                          >  1:278849/1‑281 (MQ=255)
                                                                                                                                                                                                                                    cgTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctccctgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccgggaagccccaaaaacaacacaataat                         <  2:167058‑M2/282‑233 (MQ=255)
                                                                                                                                                                                                                                    cgTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATAggtgatgctgcc                                                                                                                                                                                                                                                     >  2:116529‑M2/1‑50 (MQ=255)
                                                                                                                                                                                                                                    cgTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATAggtgatgctgcc                                                                                                                                                                                                                                                     <  2:277001‑M2/62‑13 (MQ=255)
                                                                                                                                                                                                                                    cgTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATAggtgatgctgcc                                                                                                                                                                                                                                                     <  1:116529‑M2/62‑13 (MQ=255)
                                                                                                                                                                                                                                    cgTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATAggtgatgctgcc                                                                                                                                                                                                                                                     >  1:277001‑M2/1‑50 (MQ=255)
                                                                                                                                                                                                                                    cgTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATAcc                                                                                                                                                                                                                                                               >  2:80469/1‑52 (MQ=255)
                                                                                                                                                                                                                                    cgTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATAcc                                                                                                                                                                                                                                                               <  1:80469/52‑1 (MQ=255)
                                                                                                                                                                                                                                    cgTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAAc                                                                                                                                                                                                  <  1:275351/113‑1 (MQ=255)
                                                                                                                                                                                                                                    cgTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAAc                                                                                                                                                                                                  >  2:275351/1‑113 (MQ=255)
                                                                                                                                                                                                                                    cgTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGGAGACGCGTa                                                                                                                                                                                   <  1:171528/128‑1 (MQ=255)
                                                                                                                                                                                                                                    cgTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGGAGACGCGTa                                                                                                                                                                                   >  2:171528/1‑128 (MQ=255)
                                                                                                                                                                                                                                    cgTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGGAGACGCGTATGAACCTGGTGGa                                                                                                                                                                      >  1:320397/1‑141 (MQ=255)
                                                                                                                                                                                                                                    cgTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGGAGACGCGTATGAACCTGGTGGa                                                                                                                                                                      <  2:320397/141‑1 (MQ=255)
                                                                                                                                                                                                                                             acTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcag                                                                            >  2:240677‑M2/1‑41 (MQ=255)
                                                                                                                                                                                                                                             acTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcag                                                                            <  1:240677‑M2/222‑182 (MQ=255)
                                                                                                                                                                                                                                                  gtataaacaaaaaGCCCAACCTTTCCCCCTGGGTGTACCCCCTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCCCAGGAGACGCGTATGAACCTGGTGGATATCGCCATTCTTATCCTCAAACTCATTGTTGCAGCACTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGgatgc            <  2:371938/275‑1 (MQ=255)
                                                                                                                                                                                                                                                       gTCAACAAGCACAACGTTTCTCCTTGAGATAggtgatgctgccaacttactgagttagtgtatgatgttgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaaccattgatatggccatgaatggcgttggat      <  1:67053‑M2/282‑252 (MQ=255)
                                                                                                                                                                                                                                                        tCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGGAGACGCGTATGAACCTGGTGGATATCGCCATTCTTATCCTCAAACTCATTGTTGCAGCACTGCaa                                                                                                                           <  1:306951/164‑1 (MQ=255)
                                                                                                                                                                                                                                                           acaaGCACAACGTTTGTCCTTGAGATACCGCGTGCACAACAGCTGGCAAGGGGCAGCGGAAAGGTACGTCAGCTGGCAGTTCTCCTGAACCACAGGAGACGCGGATGTACCTGGTGGAGACCGCCATTTTTAATCTCCAACTCATTGTTGCAGCACTGCAACTg                                                                                                                        >  2:306951/1‑164 (MQ=255)
                                                                                                                                                                                                                                                           acaaGCACAACGTTTCTCCTTGAGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcag                                                                            <  2:136225‑M2/208‑182 (MQ=255)
                                                                                                                                                                                                                                                           acaaGCACAACGTTTCTCCTTGAGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcag                                                                            >  1:136225‑M2/1‑27 (MQ=255)
                                                                                                                                                                                                                                                           acaaGCACAACGTTTCTCCTTGAGATAggtgatgctgccaacttactgattta                                                                                                                                                                                                                                       >  1:275593‑M2/1‑27 (MQ=255)
                                                                                                                                                                                                                                                           acaaGCACAACGTTTCTCCTTGAGATAggtgatgctgccaacttactgattta                                                                                                                                                                                                                                       <  2:275593‑M2/53‑27 (MQ=255)
                                                                                                                                                                                                                                                           acaaGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGGAGACGCGTATGAACCTGGTGGATATCGCCATTCTTATCCTCAAACTCATTGTTGCAGCACTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCg                                                                           <  2:360449/209‑1 (MQ=255)
                                                                                                                                                                                                                                                           acaaGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGGAGACGCGTATGAACCTGGTGGATATCGCCATTCTTATCCTCAAACTCATTGTTGCAGCACTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCg                                                                           >  1:360449/1‑209 (MQ=255)
                                                                                                                                                                                                                                                           acaaGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGGAGACGCGTATGAACCTGGTGGATATCGCCATTCTTATCCTCAAACTCATTGTTGCAGCACTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACg  >  1:300966/1‑282 (MQ=255)
                                                                                                                                                                                                                                                           acaaGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGGAGACGCGTATGAACCTGGTGGATATCGCCATTCTTATCCTCAAACTCATTGTTGCAGCACTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACg  >  1:319505/1‑282 (MQ=255)
                                                                                                                                                                                                                                                                               tGAGATAggtgatgctgccaacttactgatttagtgtatgatgg                                                                                                                                                                                                                            <  2:272740‑M2/44‑38 (MQ=255)
                                                                                                                                                                                                                                                                               tGAGATAggtgatgctgccaacttactgatttagtgtatgatgg                                                                                                                                                                                                                            >  1:272740‑M2/1‑7 (MQ=255)
                                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                               
AAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGTGCATAGTTGAGTATCGATCACAGTTTGCGTTTTGTCCAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCTTGAGATACCGCGTGCACAACAGCTGGCAACAGGCAGCGGAAAGGTACGTCAGCTGGCAGTGCTCCTGAACCACAGGAGACGCGTATGAACCTGGTGGATATCGCCATTCTTATCCTCAAACTCATTGTTGCAGCACTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACG  >  NC_000913/3853198‑3853730

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.