| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,577,852 | C→T | L497L (CTG→CTA) | yddA ← | ABC transporter family protein YddA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,577,852 | 0 | C | T | 75.5% | 84.4 / 27.0 | 50 | L497L (CTG→CTA) | yddA | ABC transporter family protein YddA |
| Reads supporting (aligned to +/- strand): ref base C (5/7); new base T (18/19); total (24/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.57e-01 | |||||||||||
CCACATCAGCGCCACATAAAATGACGCCAGGAATAAGAACTCGCTTCATTTATTTATATCTCCGTACAGCAGGGCTTTTATTGTTTTTATAAAACCGCGCT‑AATGTCACAAATATCATCGGCCAGGTTCCAGACACCGGGTTGATGTGTAACCATAATGACGCCGCTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCCAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGTACTTCGCTCAACGATTTATCGTCTACGGGCAGGGGAAGTGCTTTACAAATAATCTCTTTCAGTAAGCCGGTTTTGATTAACGGTGTTTGTGACACATACCAACTGTCAGCAGGAGAAGAAATATCACCTTTAAACCACGGCCAGCAGTGGGATAATGTTTTAAGCA > NC_000913/1577571‑1578117 | ccACATCAGCGCCACATAAAATGACGCCAGGAATAAGAACTCGCTTCATTTATTTATATCTCCGTACAGCAGGGCTTTTATTGTTTTTATAAAACCGCGCT‑AATGTCACAAATATCATCGGCCAGGTTCCAGACACCGGGTTGATGTGTAACCATAATGACGCCGCTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCg < 1:425427/288‑1 (MQ=255)ccACATCAGCGCCACATAAAATGACGCCAGGAATAAGAACTCGCTTCATTTATTTATATCTCCGTACAGCAGGGCTTTTATTGTTTTTATAAAACCGCGCT‑AATGTCACAAATATCATCGGCCAGGTTCCAGACACCGGGTTGATGTGTAACCATAATGACGCCGCTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATAGCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCg < 1:234706/288‑1 (MQ=255) caTCAGCGCCACATAAAATGACGCCAGGAATAAGAACTCGCTTCATTTATTTATATCTCCGTACAGCAGGGCTTTTATTGTGTTTATAAAACCGCGCT‑AATGTCACAAATATCATCGGCCAGGTTCCAGACACCGGGTTGATGTGTAACCATAATGACGCCGCTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGGGATa > 1:224982/1‑288 (MQ=255) aTCAGCGCCACATAAAATGACGCCAGGAATAAGAACTCCCTTCATTTATTTATATCTCCGTACAGCAGGGCTTTTATTGTTTTTATAAAACCGCGGT‑AATGTCACAAATATCATAGGCCAGGTTCCAGACAACGGGTTGTTGTGTAACCATATTAACGCGGCTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCGCCAGATTAGCGGTAAGTTCGTACAGAAAAATGCCTTACGGACGTCGTAAAATTAAATGTGGGAGGGNGNTAc > 2:175785/1‑288 (MQ=255) caTAAAATGACGCCAGGAATAAGAACTCGCTTCATTTATTTATATCTCCGTACAGCAGGGCTTTTATTGTTTTTATAAAACCGCGCT‑AATGTCACAGATATCATCGGCCAGGTTCCAGACACCGGGTTGATGTGTAACCATAATGACGCCGCTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGttttt > 1:418584/1‑287 (MQ=255) aTAAGAACTCGCTTCATTTATTTATATCTCCGTACAGCAGGGCTTTTATTGTTTTTATAAAACCGCGCT‑AATGTCACAAATATCATCGGCCAGGTTCCAGACACCGGGTTGATGTGTAACCATAATGACGCCGCTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAata < 1:175785/286‑1 (MQ=255) cGCTTCATTTATTTATATCTCCGTACAGCAGGGCTTTTATTGTTTTTATAAAACCGCGCT‑AATGTCACAAATATCATCGCCCAGGTTCCAGACACCGGGTTGATGTGTAACCATAATGACGCCGCTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCg > 1:224269/1‑288 (MQ=255) atttatttATATCTCCGTACAGCAGGGCTTTTATTGTTTTTATAAAACCGCGCT‑AATGTCACAAATATCATCGGCCAGGTTCCAGACACCGGGTTGATGTGTAACCATAATGACGCCGCTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTTCTAGGGCGATACGTTGTTTTTc > 1:84803/1‑255 (MQ=255) ttatATCTCCGTACAGCAGGGCTTTTATTGTTTTTATAAAACCGCGCT‑AATGTCACAAATATCATCGGCCAGGTTCCAGACACCGGGTTGATGTGTAACCATAATGACGCCGCTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGa < 1:328901/258‑1 (MQ=255) gTACAGCAGGGCTTTTATTGTTTTTATAAAACCGCGCT‑AATGTCACAAATATCATCGGCCAGGTTCCAGACACCGGGTTGATGTGTAACCATAATGACGCCGCTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCa < 1:363669/288‑1 (MQ=255) tttttttTGTTTTTA‑AAAACCCCGTTAAATGTCACAAAGATCAGCGGCCAGTTTCCAGAAACCGGGTTGATGGGTAACCATAATGACGCCGCTTGTGGGTAGTTTGTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCTGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTccc < 2:224269/287‑1 (MQ=255) cTTTTATTGTTTTTATAAAACCGCGCT‑AATGTCACAAATATCATCGGCCAGGTTCCAGACACCGGGTTGATATGTAACCATAATGACGCCGCTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTccc > 1:371790/1‑288 (MQ=255) tttnaaaccncaagcT‑AGTGTCACCGATAGAATCGGCCAGTTTCCTGCAACCGGGTTGATGTGTAACCATAATGACGCCGCTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATAcgcg < 2:418584/251‑1 (MQ=255) tCCGGACACCTGGCAGATGTTTAACCATAATGACGCCGCTTGTGGGTAGTGTTTCACGAACTAAAGGCAGTAAGCGGATAGCCTATTGGTCCTCGAGATGAGAGGTAGTTTCGTCAAGAAATTTCCATTTCGGACGTCGTAAAATTAATCGTGCCAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCaa < 2:272200/229‑1 (MQ=255) cGGGTTGATGTGTAACCATAATGACGCCGCTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGCGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCCAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAg > 1:272200/1‑229 (MQ=255) aCCATAATGACGCCGCTTGTGGGTAGTTTTTCAAGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGAt > 1:449716/1‑140 (MQ=255) tAATGACGCCGCTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCCAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGTACTTCGCTCAACGATTTATCGTCTACGGGCAGGGGAATTGCTTTGCAAATAATCTCTTTCa > 1:189458/1‑288 (MQ=255) aTGACGCCGCTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCg > 2:213410/1‑177 (MQ=255) aTGACGCCGCTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCg < 1:213410/177‑1 (MQ=255) aTGACGCCGCTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGt > 1:695098/1‑225 (MQ=255) gccgcTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCg > 1:565645/1‑127 (MQ=255) gccgcTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCg < 2:565645/127‑1 (MQ=255) ccgcTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGTACTTCGCTCAACGATTTATCGTCTACgg > 1:347306/1‑247 (MQ=255) ccgcTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCCAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGaa < 1:165000/154‑1 (MQ=255) ccgcTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCCAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGaa > 2:165000/1‑154 (MQ=255) gTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCCAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAAGACGCGCAGCCAATTTCCCGAGACCAACCTGATGCAGTACATCGCCCAACGATTTATCGTCTACGGGCAGGTGAAGTGCTTTACAAATAATCTCTTTCAGTAAGCCGGTTTTGATTAACg < 1:171526/288‑1 (MQ=255) cTAAACGCAGTAAGCGGATGGCCTCTTGTTCCTCAAGAGGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAGGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGTACTTCGCTCAACGATTTATCGGCTACGGGCAGGGGAAGTGCTTTACAAATAATCTCTTTCAGTAAGCCGGTTTTGATTAACg < 1:699188/276‑1 (MQ=255) aGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGc > 2:238024/1‑133 (MQ=255) aGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGc < 1:238024/133‑1 (MQ=255) ctctTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGTACTTCGCTCAACGATTTATCGTCTACGGGCAGGGGAAGTGCTTTACAAATAATCTCTTTCAGTAAGCCGGTTTTGATTAACGGTGTTTGTGACACATACCAACt < 1:4025/276‑1 (MQ=255) ctctTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAAGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCAATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGTACTTAGCTCAACGATTTATCGTCTACGGGCAGGGGAAGTGCTTTACAAATAATCTCTTTCAGTAAGCCGGTTTTGATTAACGGTGTTTGTGACACATACCAACTGTCAGCAGgaga < 1:211178/288‑1 (MQ=255) ctTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGTACTTCGCTCAACGATTTATCGTCTACGGGCAGGGGAAGTGCTTTACAAATAATCTCTTTCAg < 1:497425/232‑1 (MQ=255) tGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAAcc < 1:400205/159‑1 (MQ=255) tGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAAcc > 2:400205/1‑159 (MQ=255) ccTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCCAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGTACTTCGCTCAACGATTTATCGTCTACGGGCAGGGGAAGTGCTTTACAAATAATCTCTTTCAGTAAGCCGGTTTTGATTAACGGTGTTTGTGACACATACCAACTGTCAGCAGGAGAAGAAatat < 1:81091/288‑1 (MQ=255) cAAGTTGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGt > 1:364362/1‑161 (MQ=255) gTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGTACTTCGCTCAACGATTTATCGTCTACTGGCAGGGGAAGTGCTTTACAAATAATCTCTTTCAGTAAGCCGGTTTTGATTAACGGTGTTTGTGACACATACCAACTGTCAGCAGGAGAAGAAATATCACCTTTAAACCAc > 1:665154/1‑288 (MQ=255) gTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCCAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGTACTTCGCTCAACGATTTATCGTCTACGGGCAGGGGAAGTGCTTTACAAATAATCTCTTTCAGTAAGCCGGTTTTGATTAACGGTGTTTGTGACACATACCAACTGTCAGCAGGAGAAGAAatat < 1:161589/274‑1 (MQ=255) gTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTcgccg > 1:51014/1‑72 (MQ=255) gTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTcgccg < 2:51014/72‑1 (MQ=255) gTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCCAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGTACTTCGCTCAACGATTTATCGTCTa < 2:308803/167‑1 (MQ=255) gTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCCAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGTACTTCGCTCAACGATTTATCGTCTa > 1:308803/1‑167 (MQ=255) tCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCCAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGTACTTCGCTCAACGATTTATCGTCTACGGGCAGGGGAAGTGCTTTACAAATAATCTCTTTCAGTAAGCCGGTTTTGATTAACGGTGTTTGTGACCCATACAAACTGTCACAAGGAGAAAAAAAATAAACTTTtaaaaatgccatca > 2:161589/1‑275 (MQ=255) tCAAAAAATATCCCTTTCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGTACTTCGCTCAACGATTTATCGTCTACGGGCAGGGGAAGTGCTTTACAAATAATCTCTTTCAGTAAGCCGGTTTTGATTAACGGTGTTTGTGACACATACCAACTGTCAGCAGGAGAAGAAATATCACCTTTAAACCACGGCcagcag < 1:572135/288‑1 (MQ=255) ttCGGACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCCGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGTACTTCGCTCAACGATTTATAGTCTACGGGCAGGGGAAGTGCTGTACAAATAATCCCTTTCAGTAAGCCGGTTTTGATTAACGGTGTTTGTGACCCATACCAACTGTCAGCAGGAGAAGAAATATCACGTTTAAACCACGGCCAGCAGTGGGATAATGTTTTa > 1:645145/1‑288 (MQ=255) cGGACGTCGTAAAATTAATCGTGCCAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGTACTTCGCTCAACGATTTATCGTCTACGGGCAGGGGAAGTGCTTTACAAATAATCTCTTTCAGTAAGCCGGTTTTGATTAACGGTGTTTGTGACACATACCAACTGTCAGCAGGAGAAGAAATATCACCTTTAAACCACGGCCAGCAGTGGGATAATGTTTTAAg < 1:364452/288‑1 (MQ=255) gACGTCGTAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGTACTTCGCTCAACGATTTATCGTCTACGGGCAGGGGAAGTGCTTTACAAATAATCTCTTTCAGTAAGCCGGTTTTGATTAACGGTGTTTGTGACACATACCAACTGTCAGCAGGAGAAGAAATAACACCTTTAAACCACGGCCAGCAGTGGGATAATGTTTTAAGCa > 1:302661/1‑288 (MQ=255) gtAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTcgccg < 1:27964/41‑1 (MQ=255) gtAAAATTAATCGTGCTAGGGCGATACGTTGTTTTTcgccg > 2:27964/1‑41 (MQ=255) tCGTGCTAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGTACTTCGCTCAACGATTTATCGTCTACGGGCAGGTGAAGTGCTTTACAAATAATCTCTTTCAGTAAGCCGGTTTTGATTAACGGTGTTTGTGACACATACCAACTGTCAGCAGGAGAAGAAATATCACCTTTAAACCACGGcc < 1:271610/248‑1 (MQ=255) | CCACATCAGCGCCACATAAAATGACGCCAGGAATAAGAACTCGCTTCATTTATTTATATCTCCGTACAGCAGGGCTTTTATTGTTTTTATAAAACCGCGCT‑AATGTCACAAATATCATCGGCCAGGTTCCAGACACCGGGTTGATGTGTAACCATAATGACGCCGCTTGTGGGTAGTTTTTCACGCACTAAACGCAGTAAGCGGATAGCCTCTTGTTCCTCAAGATGAGAGGTAGTTTCGTCAAGAAATATCCATTTCGGACGTCGTAAAATTAATCGTGCCAGGGCGATACGTTGTTTTTCGCCGCTGGAAAGAATATCTCCCCAGCGATCGTGGTCATGAATACGCGCAGCCAATTTCCCAAGACCAACCTGATGCAGTACTTCGCTCAACGATTTATCGTCTACGGGCAGGGGAAGTGCTTTACAAATAATCTCTTTCAGTAAGCCGGTTTTGATTAACGGTGTTTGTGACACATACCAACTGTCAGCAGGAGAAGAAATATCACCTTTAAACCACGGCCAGCAGTGGGATAATGTTTTAAGCA > NC_000913/1577571‑1578117 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |