| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1822856 = | 57 (1.140) | 3 (0.060) | 3/398 | 5.1 | 5.6% | coding (399/828 nt) | nadE | NH3‑dependent NAD(+) synthetase |
| ? | NC_000913 | = 3500032 | 47 (0.970) | coding (123/1338 nt) | frlA | fructoselysine/psicoselysine transporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACTGTTTACCCTGACGTTTGTTGAGACGATACAGCGGATTAATGTCCGTACCGCCGTCACCATATTTAGTGAAGAATCCGGTAATGGCTTCTGCTGCATGATCGGTGCCCACCACGACACCGCTGGTCATACCCGCAATGCTATATTGTGCTTTCATCCGCTCACGCGCTTTTTCATTGCCACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1823040‑1822856‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacggCGTGCCCGCTGCTTTTGCCACTTCACCCACAGATACAAAAATACCGGAGCCGACGGTTGTCCCGACGGCGATTGCAAGAACGGCCCAAAATCCGAGCTTGCGTTGGAGTTCCTGGCTTCCCATAGCGATACCTTTTTCTTGTCCAATACGTTGTAGGGGAGAGTTTGCAGTCATTTAAAAGGTAACATGACAATGCATGATGAATATAACAACATATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGT < NC_000913/3500032‑3499747 ACTGTTTACCCTGACGTTTGTTGAGACGATACAGCGGATTAATGTCCGTACCGCCGTCACCATATTTAGTGAAGAATCCGGTAATGGCTTCTGCTGCATGATCGGTGCCCACCACGACACCGCTGGTCATACCCGCAATGCTATATTGTGCTTTCATCCGCTCACGCGCTTTTTCATTGCC > 1:478797/1‑181ACTGTTTACCCTGACGTTTGTTGAGACGATACAGCGGATTAATGTCCGTACCGCCGTCACCATATTTAGTGAAGAATCCGGTAATGGCTTCTGCTGCATGATCGGGGCCCACCACGACACCGCTGGTCATACCCGCAATGCTATATTGTGCTTTCATCCGCTCACGCGCTTTTTCATTGCC < 2:478797/181‑1 TGCTTTCATCCGCTCACGCGCTTTTTCATTGCCACGGCGTGCCCGCTGCTTTTGCCACTTCACCCACAGATACAAAAATACCGGAGCCGACGGTTG < 1:737289/96‑1 TGCTTTCATCCGCTCACGCGCTTTTTCATTGCCACGGCGTGCCCGCTGCTTTTGCCACTTCACCCACAGATACAAAAATACCGGAGCCGACGGTTG > 2:737289/1‑96 gtaTGCCACGGCGTGCCCGTTGCTTTTGCCACTTCACCCACAGATACAAAAATACCGTAGCCGACGGTTGTCCCGACGGCGATTGCAAGAACGGCCCAAAATCCGTGCTTGCGTTGGAGTTCCTGGCTTCCCATAGCGATACCTTTTTCTTGTCCA < 2:99260/153‑1 GGCGTGCCCGCTGCTTTTGCCCCTTCACCCACAGATACAAAAATACCGGAGCCGACGGTTGTCCCGACGGCGATTGCAAGAACGGCCCAAAATCCGAGCTTGCGTTGGAGTTCCTGGCTTCCCATAGCGATACCTTTTTCTTTTCCAATACGTTGTAGGGGAGAGTTTGCAGTCATTTAAAAGGTAACATGACAATGCATGATGAATATA > 1:332782/1‑210 GGCGTGCCCGCTGCTTTTGCCACTTTACCCACAGATACAAAAATACCCGAGCCGACGGTTGTCCCGACGGCGGTTGCAAGAACGGCCCAAAATCCGAGCTTGCGTTGGAGTTTCTGGCTTCCCATAGCGATAACTTTTTCTTTTCCAATACGTTGT > 1:99260/1‑156 GGCGTGCCCGCTGCTTTTGCCACTTCACCCACAGATACAAAAATACCGGAGCCGACGGTTGTCCCGACGGCGATTGCAAGAACGGCCCAAAATCCGAGCTTGCGTTGGAGTTCCTGGCTTCCCATAGCGATACCTTTTTCTTGTCCAATAAGTTGGAGGGGGGAGTTTGCAGGCATTTAAAAGGTAACATGACAATGCATGATGAATATAACAACATATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGAACGGGCTGTGGCTAATGGggttagg > 1:241953/1‑281 GGCGTGCCCGCTGCTTTTGCCACTTCACCCACAGATACAAAAATACCGGAGCCGACGGTTGTCCCGACGGCGATTGCAAGAACGGCCCAAAATCCGAGCTTGCGTTGGAGTTCCTGGCTTCCCATAGCGATACCTTTTTCTTGTCCA < 1:712300/147‑1 GGCGTGCCCGCTGCTTTTGCCACTTCACCCACAGATACAAAAATACCGGAGCCGACGGTTGTCCCGACGGCGATTGCAAGAACGGCCCAAAATCCGAGCTTGCGTTGGAGTTCCTGGCTTCCCATAGCGATACCTTTTTCTTGTCCA > 2:712300/1‑147 GGCGTGCCCGCTGCTTTTGCCACTTCACCCACAGATACAAAAATACCGGAGCCGACGGTTGTCCCGACGGCGATTGCAAGAACGGCCCAAAATCCGAGCTTGCGTTGGAGTTCCTGGCTTCCCATAGCGATACCTTTTTC > 1:845887/1‑140 GGCGTGCCCGCTGCTTTTGCCACTTCACCCACAGATACAAAAATACCGGAGCCGACGGTTGTCCCGACGGCGATTGCAAGAACGGCCCAAAATCCGAGCTTGCGTTGGAGTTCCTGGCTTCCCATAGCGATACCTTTTTC < 2:845887/140‑1 ACTGTTTACCCTGACGTTTGTTGAGACGATACAGCGGATTAATGTCCGTACCGCCGTCACCATATTTAGTGAAGAATCCGGTAATGGCTTCTGCTGCATGATCGGTGCCCACCACGACACCGCTGGTCATACCCGCAATGCTATATTGTGCTTTCATCCGCTCACGCGCTTTTTCATTGCCACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1823040‑1822856‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacggCGTGCCCGCTGCTTTTGCCACTTCACCCACAGATACAAAAATACCGGAGCCGACGGTTGTCCCGACGGCGATTGCAAGAACGGCCCAAAATCCGAGCTTGCGTTGGAGTTCCTGGCTTCCCATAGCGATACCTTTTTCTTGTCCAATACGTTGTAGGGGAGAGTTTGCAGTCATTTAAAAGGTAACATGACAATGCATGATGAATATAACAACATATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGT < NC_000913/3500032‑3499747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |