BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	509,606	(T)_6→5	coding (998/2505 nt)	ybaR ←	putative ATPase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	509,601	0	T	.	82.3%	699.3 / 192.3	239	coding (1003/2505 nt)	ybaR	putative ATPase
Reads supporting (aligned to +/- strand): ref base T (24/18); new base . (92/104); total (117/122)
Fisher's exact test for biased strand distribution p-value = 2.39e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.00e-01

Only 100 of 260 total aligned reads displayed.

TTCGCCCTGGGTAATCTCGCCATCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAGAAGAACGCTGGCGTGCG  >  NC_000913/509509‑509689

ttCGCCCTGGGTAATCTCGCCATCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGCt                                                                                          >  2:5963862/1‑93 (MQ=255)

   gCCCTGGGTAATCTCGCCATCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGCtttt                                                                                       <  1:6131979/93‑1 (MQ=255)

    cccTGGGTAATCTCGCCATCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGCttttt                                                                                      <  2:4686439/93‑1 (MQ=255)

     ccTGGGTAATCTCGCCATCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGCtttttc                                                                                     >  1:5619565/1‑92 (MQ=255)

      cTGGGTAATCTCGCCATCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGCtttttca                                                                                    >  2:1150899/1‑91 (MQ=255)

       tGGGTAATCTCGCCATCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGCtttttcac                                                                                   <  1:78904/93‑4 (MQ=255)

        gggTAATCTCGCCATCTACCTGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCAc                                                                                  >  2:1500787/1‑93 (MQ=255)

         ggTAATCTCGCCATCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCt                                                                                >  1:4341108/1‑93 (MQ=255)

          gTAATCTCGCCATCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCtt                                                                               <  2:210088/93‑1 (MQ=255)

           tAATCTCGCCATCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCACCtt                                                                               <  1:2402399/93‑1 (MQ=255)

           tAATCTCGCCATCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCACCtt                                                                               <  1:5502078/93‑1 (MQ=255)

           tAATCTCGCCATCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTc                                                                              <  2:6291413/93‑1 (MQ=255)

                 cGCCATCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGt                                                                        <  1:6484729/93‑1 (MQ=255)

                  gCCATCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTa                                                                       >  2:3222132/1‑93 (MQ=255)

                    cATCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAAc                                                                     >  2:6630608/1‑93 (MQ=255)

                    cATCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAAc                                                                     >  1:311271/1‑93 (MQ=255)

                     aTCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAAcc                                                                    >  1:6336599/1‑93 (MQ=255)

                     aTCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAAcc                                                                    <  1:4178569/93‑1 (MQ=255)

                     aTCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAAcc                                                                    >  2:4126300/1‑93 (MQ=255)

                     aTCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAAcc                                                                    <  1:6919499/93‑1 (MQ=255)

                      tCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCa                                                                   <  2:5202061/93‑1 (MQ=255)

                      tCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCa                                                                   >  2:2362178/1‑93 (MQ=255)

                      tCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCa                                                                   >  1:5128100/1‑93 (MQ=255)

                      tCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCa                                                                   <  1:4461120/93‑1 (MQ=255)

                       cTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAg                                                                  <  2:2880043/93‑1 (MQ=255)

                       cTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAg                                                                  <  1:2267599/93‑1 (MQ=255)

                        tACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAgg                                                                 >  2:2515121/1‑93 (MQ=255)

                        tACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAgg                                                                 >  2:4510083/1‑93 (MQ=255)

                        tACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAgg                                                                 <  2:5055227/93‑1 (MQ=255)

                         aCCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCACCTTCGTCAGTAACCAgg                                                                 <  1:6946188/93‑1 (MQ=255)

                         aCCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGc                                                                <  2:6747488/93‑1 (MQ=255)

                         aCCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGc                                                                <  1:1335801/93‑1 (MQ=255)

                          ccGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCACCTTCGTCAGTAACCAGGc                                                                >  2:480210/1‑93 (MQ=255)

                            ggCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTg                                                             >  2:1050996/1‑93 (MQ=255)

                             gCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGc                                                            >  1:2089894/1‑93 (MQ=255)

                              cACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCACCTTCGTCAGTAACCAGGCGTGc                                                            <  2:2214966/93‑1 (MQ=255)

                              cACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGcc                                                           >  2:3845534/1‑93 (MQ=255)

                                cgcgATCGCCGGTCGTCAGGCGCAGCAACATACCTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCACCTTCGTCAGTAACCAGGCGTGCCg                                                          >  1:5303578/1‑93 (MQ=255)

                                  cgATCGCCGGTCGTCAGGCGCAGCAACATACCTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTc                                                        >  2:3115214/1‑93 (MQ=255)

                                   gATCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTcgg                                                      >  1:3554127/1‑93 (MQ=255)

                                    aTCGCCGGTCGTCAGGCGCAGCAACATACCTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTcgg                                                      >  1:4283960/1‑93 (MQ=255)

                                    aTCGCCGGTCGTCAGGCGCAGCAACATACCTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTcgg                                                      >  1:2654204/1‑93 (MQ=255)

                                    aTCGCCGGTCGTCAGGCGCAGCAACATACCTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTcgg                                                      >  2:534996/1‑93 (MQ=255)

                                    aTCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTcggc                                                     <  1:1723729/93‑1 (MQ=255)

                                    aTCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTcggc                                                     >  2:3637218/1‑93 (MQ=255)

                                     tCGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTcggcg                                                    >  1:1057801/1‑93 (MQ=255)

                                      cGCCGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTcggcgg                                                   <  2:6845515/93‑1 (MQ=255)

                                        ctggTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCgggg                                                 >  1:6599058/3‑93 (MQ=255)

                                        ccGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCgggg                                                 >  1:4765250/1‑93 (MQ=255)

                                         cGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGt                                                <  1:3483095/93‑1 (MQ=255)

                                         cGGTCGTCAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGt                                                >  2:493226/1‑93 (MQ=255)

                                          ggTCGTCAGGCGCAGCAACATACCTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGt                                                >  1:1110088/1‑93 (MQ=255)

                                             cgtcAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTaaa                                            <  2:1780137/93‑1 (MQ=255)

                                             cgtcAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTaaa                                            <  1:232054/93‑1 (MQ=255)

                                              gtcAGGCGCAGCAACATACCTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTaaa                                            <  1:2198134/93‑1 (MQ=255)

                                              gtcAGGCGCAGCAACATACCTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTaaa                                            >  1:4631742/1‑93 (MQ=255)

                                              gtcAGGCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGGTAAAt                                           >  1:718497/1‑93 (MQ=255)

                                               tcAGGCGCAGCAACATACCTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAAt                                           <  2:1279545/93‑1 (MQ=255)

                                                  ggCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAg                                       <  2:713752/93‑1 (MQ=255)

                                                  ggCGCAGCAACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAg                                       <  1:7216661/93‑1 (MQ=255)

                                                        gcaACATACCTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACt                                  >  2:1898624/1‑93 (MQ=255)

                                                        gcaACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACtt                                 >  2:5527114/1‑93 (MQ=255)

                                                         caACATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACttt                                <  2:3946290/93‑1 (MQ=255)

                                                           aCATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTc                              <  2:3388188/93‑1 (MQ=255)

                                                            cATACCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCCCCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTcc                             <  1:2553392/93‑1 (MQ=255)

                                                               aCCTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAg                           <  1:3939949/93‑1 (MQ=255)

                                                               aCCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAgc                          <  1:215736/93‑1 (MQ=255)

                                                               aCCCGGCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAgc                          <  1:5951384/93‑1 (MQ=255)

                                                                ccTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAgc                          >  1:5872533/1‑93 (MQ=255)

                                                                 ccggCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAgcgc                        <  2:3004540/91‑1 (MQ=255)

                                                                  cggCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGcc                       <  1:1879493/92‑1 (MQ=255)

                                                                  cggCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGcc                       <  2:5418674/92‑1 (MQ=255)

                                                                   ggCTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCt                      <  2:4442434/93‑1 (MQ=255)

                                                                     cTGCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTa                    <  2:5139044/93‑1 (MQ=255)

                                                                       gCACTTCTGCCAGAGGCACGCTTTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTag                   <  2:4329484/93‑1 (MQ=255)

                                                                       gCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTaga                  >  2:7279310/1‑93 (MQ=255)

                                                                       gCACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGGTAAATCGAGTAACTTTTTCAGCGCCTTaga                  >  1:295480/1‑93 (MQ=255)

                                                                        cACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTagaa                 <  2:7081829/93‑1 (MQ=255)

                                                                        cACTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTagaa                 <  1:7498339/93‑1 (MQ=255)

                                                                          cTTCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTagaaga               >  2:887375/1‑93 (MQ=255)

                                                                           ttCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAgaagaa              <  2:6119856/93‑1 (MQ=255)

                                                                           ttCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAgaagaa              >  1:4038828/1‑93 (MQ=255)

                                                                           ttCTGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAgaagaa              <  1:1923398/93‑1 (MQ=255)

                                                                              tGCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAGAAGAACGc           >  2:752352/1‑93 (MQ=255)

                                                                               gCCAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAGAAGAACGCt          >  2:2649433/1‑93 (MQ=255)

                                                                                ccAGAGGCCCGC‑TTTTCCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAACCGAGTACCTTTTCCAGCGCCTTAGAAGAACGCTg         <  1:3690851/93‑1 (MQ=255)

                                                                                ccAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAGAAGAACGCTg         >  2:4713408/1‑93 (MQ=255)

                                                                                ccAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAGAAGAACGCTg         >  2:1428449/1‑93 (MQ=255)

                                                                                 cAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAGAAGAACGCTgg        <  1:3709787/93‑1 (MQ=255)

                                                                                 cAGAGGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAGAAGAACGCTgg        >  2:3410632/1‑93 (MQ=255)

                                                                                  agagGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAGAAGAACGCTGGc       <  2:3310530/93‑1 (MQ=255)

                                                                                  agagGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAGAAGAACGCTGGc       <  1:5205128/93‑1 (MQ=255)

                                                                                  agagGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAGAAGAACGCTGGc       <  2:1968498/93‑1 (MQ=255)

                                                                                  agagGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAGAAGAACGCTGGc       <  1:5083466/93‑1 (MQ=255)

                                                                                  agagGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAGAAGAACGCTGGc       >  2:4069058/1‑93 (MQ=255)

                                                                                  agagGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAGAAGAACGCTGGc       <  2:643049/93‑1 (MQ=255)

                                                                                   gagGCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAGAAGAACGCTGGCg      <  1:6495312/93‑1 (MQ=255)

                                                                                     ggCACGC‑TTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAGAAGAACGCTGGCGTg    >  2:5695414/1‑93 (MQ=255)

                                                                                        aCGCTTTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAGAAGAACGCTGGCGTgcg  <  1:3155897/93‑1 (MQ=255)

                                                                                        aCGCTTTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAGAAGAACGCTGGCGTgcg  >  1:3390905/1‑93 (MQ=255)

TTCGCCCTGGGTAATCTCGCCATCTACCGGCACGCGATCGCCGGTCGTCAGGCGCAGCAACATACCTGGCTGCACTTCTGCCAGAGGCACGCTTTTTTCACCTTCGTCAGTAACCAGGCGTGCCGTCGGCGGGGTTAAATCGAGTAACTTTTCCAGCGCCTTAGAAGAACGCTGGCGTGCG  >  NC_000913/509509‑509689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`