| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,033,040 | (G)5→6 | coding (564/1794 nt) | hyaB → | hydrogenase‑1 large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,033,035 | 1 | . | G | 79.2% | 572.0 / 152.8 | 212 | coding (559/1794 nt) | hyaB | hydrogenase‑1 large subunit |
| Reads supporting (aligned to +/- strand): ref base . (29/15); new base G (87/81); total (116/96) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.04e-01 | |||||||||||
Only 100 of 238 total aligned reads displayed.
CGAAATCATCCCCTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑GGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGATTTCCAGCGTGAAA > NC_000913/1032943‑1033122 | gAAATCATCCCCTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑g < 1:6942906/93‑1 (MQ=255) gAAATCATCCCCTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑g < 2:7222008/93‑1 (MQ=255) gAAATCATCCCCTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑g > 2:6851344/1‑93 (MQ=255) gAAATCATCCCCTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑g > 1:5690573/1‑93 (MQ=255) aaaTCATCCCCTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑gg < 2:5932964/93‑1 (MQ=255) aaTCATCCCCTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑ggg < 1:3607260/93‑1 (MQ=255) aaTCATCCCCTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑ggg < 2:1322698/93‑1 (MQ=255) atcatcCCCTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑gggg < 2:6984444/93‑1 (MQ=255) tcatcCCCTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑ggggg < 2:2837786/93‑1 (MQ=255) tcatcCCCTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑ggggg > 2:4411003/1‑93 (MQ=255) catcCCCTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑gggggg < 2:5210951/93‑2 (MQ=255) atcCCCTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑ggggggc > 1:1904482/1‑91 (MQ=255) atcCCCTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑ggggggc > 2:6293819/1‑91 (MQ=255) atcCCCTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑GGGGGCa > 1:4409691/1‑93 (MQ=255) tcCCCTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑ggggggca > 1:7265163/1‑90 (MQ=255) cccTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑GGGGGCAccc < 1:6017255/93‑1 (MQ=255) ccTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCAccc > 2:4602833/1‑93 (MQ=255) ccTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCAccc > 2:2769863/1‑93 (MQ=255) cTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCg > 1:5261493/1‑93 (MQ=255) tGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGc > 2:1679300/1‑93 (MQ=255) ggCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCa > 2:2918371/1‑93 (MQ=255) ggCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑GGGGGCACCCGCAg < 1:4527204/93‑1 (MQ=255) gCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTACCG‑GGGGGCACCCGCAg < 1:7481860/93‑1 (MQ=255) gCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAg > 1:2860553/1‑93 (MQ=255) cTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑GGGGGCACCCGCAGTa > 1:1986264/1‑93 (MQ=255) tATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTa > 2:825103/1‑93 (MQ=255) aTTTCTTCGACGTACAAAACCGCCTGAACAAATTTGTTGAAGGCGGGAAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTAc > 1:4658508/1‑93 (MQ=255) aTTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTAc > 1:4885551/1‑93 (MQ=255) aTTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTAc < 2:1862838/93‑1 (MQ=255) tttCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCCCCCGCAGTACa > 1:1978072/1‑93 (MQ=255) ttcttcGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACaa < 2:3806787/93‑1 (MQ=255) cttcGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAAc > 1:4020365/1‑93 (MQ=255) ttcGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACt < 2:4077287/93‑1 (MQ=255) ttcGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACt > 2:2530855/1‑93 (MQ=255) ttcGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑GGGGGCACCCGCAGTACAAACTg > 1:877899/1‑93 (MQ=255) tcGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTg < 2:3326465/93‑1 (MQ=255) cGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTgc < 2:4668404/93‑1 (MQ=255) gACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑GGGGGCACCCGCAGTACAAACTgccg > 1:5607435/1‑93 (MQ=255) tACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCa > 1:6193584/1‑93 (MQ=255) aCAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAg > 2:314698/1‑93 (MQ=255) aaaaCCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGaa < 1:1050689/93‑1 (MQ=255) aaaaCCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑GGGGGCACCCGCAGTACAAACTGCCGCCAGAAg > 1:6627435/1‑93 (MQ=255) aaCCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGc > 1:6742137/1‑93 (MQ=255) aCCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCt > 1:6876521/1‑93 (MQ=255) cGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTaa > 2:5659864/1‑93 (MQ=255) gCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑GGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAAcc < 2:4862483/93‑1 (MQ=255) gCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑GGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAAcc > 1:3795977/1‑93 (MQ=255) ccTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAAcc < 2:3045832/93‑1 (MQ=255) ccTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAAcc < 1:3716692/93‑1 (MQ=255) tGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTg > 2:485367/1‑93 (MQ=255) tGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTg > 2:4162332/1‑93 (MQ=255) tGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTg > 1:3314954/1‑93 (MQ=255) tGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑GGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGa > 1:719163/1‑93 (MQ=255) aaaaaaTTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGAt < 2:6361010/93‑1 (MQ=255) aaaaaTTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATg < 1:1217155/93‑1 (MQ=255) aaaaaTTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATg < 2:660980/93‑1 (MQ=255) aaaaTTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATgg < 1:3239732/93‑1 (MQ=255) aaTTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCCCCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGc < 1:5790760/93‑1 (MQ=255) ttgttgAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCttt < 1:533732/93‑1 (MQ=255) tgAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGccc > 2:1526679/1‑93 (MQ=255) gAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCGGCAGTCCAAACTGCCGCCCGCAGCTAACCTGATGGGCTTGGCCCa > 1:2213149/1‑93 (MQ=255) gAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCa > 1:6475127/1‑93 (MQ=255) aGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACt > 2:2244430/1‑93 (MQ=255) aGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑GGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTa > 2:3473764/1‑93 (MQ=255) ggCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTa > 1:5863531/1‑93 (MQ=255) ggCGGGCAGTTGGGAATCTTCCGCAATGGCTA‑CT‑GGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTAt > 1:1099704/1‑93 (MQ=255) gCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTAt < 2:2286656/93‑1 (MQ=255) cGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTAtc < 1:1651151/93‑1 (MQ=255) ggCAGTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTAtctc < 2:5092382/93‑1 (MQ=255) ggCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑GGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCg > 2:2334035/1‑93 (MQ=255) gTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAg > 2:3358552/1‑93 (MQ=255) gTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAg > 1:100280/1‑93 (MQ=255) gTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAg < 2:4218482/93‑1 (MQ=255) gTTGGGGATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAg < 2:2894165/93‑1 (MQ=255) ggggATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGctc < 1:6363842/93‑1 (MQ=255) ggggATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGctc < 1:2909684/93‑1 (MQ=255) ggggATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGctc > 2:1754798/1‑93 (MQ=255) gggATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGctct > 2:1707749/1‑93 (MQ=255) ggATCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCtctc > 1:342955/1‑93 (MQ=255) gATCTTCCGCAATGGCTA‑CT‑GGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGa > 2:6954628/1‑93 (MQ=255) gATCTTCCGCAATGGCTA‑CT‑GGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGa > 1:953304/1‑93 (MQ=255) aTCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGa < 1:1384385/93‑1 (MQ=255) tCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGAt < 1:2038900/93‑1 (MQ=255) tCTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGAt < 1:5478253/93‑1 (MQ=255) tCTTCCGCAATGGCTA‑CT‑GGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGAtt > 2:4490685/1‑93 (MQ=255) cTTCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGAtt < 1:1491868/93‑1 (MQ=255) cTTCCGCAATGGCTA‑CT‑GGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGAttt > 1:5022708/1‑93 (MQ=255) ttCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGAttt > 2:4457284/1‑93 (MQ=255) ttCCGCAATGGCTA‑CT‑GGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGATTTc > 2:871620/1‑93 (MQ=255) tCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGATTTc < 1:171825/93‑1 (MQ=255) tCCGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGATTTc > 2:7494294/1‑93 (MQ=255) ccGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGATTTcc > 1:6332141/1‑93 (MQ=255) cGCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGATTTCCa < 2:6771152/93‑1 (MQ=255) gCAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGATTTCCAg < 2:5618570/93‑1 (MQ=255) cAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGATTTCCAGc < 2:4648826/93‑1 (MQ=255) cAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGATTTCCAGc > 2:3888930/1‑93 (MQ=255) cAATGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGATTTCCAGc > 2:733687/1‑93 (MQ=255) aaTGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGATTTCCAGCg < 2:5328402/93‑1 (MQ=255) aTGGCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGATTTCCAGCGt < 1:3866646/93‑1 (MQ=255) gCTA‑CTGGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGATTTCCAGCGTGaa < 1:2600807/93‑1 (MQ=255) | CGAAATCATCCCCTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTA‑CT‑GGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGATTTCCAGCGTGAAA > NC_000913/1032943‑1033122 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |