| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,957,560 | +C | intergenic (‑129/‑732) | ppiC ← / → rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,957,558 | 1 | . | C | 97.6% | 1372.8 / 15.5 | 411 | intergenic (‑127/‑734) | ppiC/rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Reads supporting (aligned to +/- strand): ref base . (9/1); new base C (185/216); total (194/217) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.69e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 426 total aligned reads displayed.
TAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑T‑GC‑TCGCA‑GGT‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG > NC_000913/3957470‑3957645 | tAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGT‑cc > 1:3519080/1‑93 (MQ=255) aGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGGCTTCGCA‑GGT‑ccc < 2:1064051/93‑2 (MQ=255) gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGT‑ccct < 2:4730922/93‑3 (MQ=255) gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGT‑ccct > 2:181928/1‑91 (MQ=255) aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAgg < 1:5444915/93‑1 (MQ=255) tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCGAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAggg > 2:1697448/1‑93 (MQ=255) tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAggg < 2:1164613/93‑1 (MQ=255) ccGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAgggg > 2:353311/1‑93 (MQ=255) cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGga < 2:4881286/93‑1 (MQ=255) gCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGgag > 2:4566382/1‑93 (MQ=255) gCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGgag > 2:6941401/1‑93 (MQ=255) cAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGgaga > 2:7186010/1‑93 (MQ=255) aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGaa < 2:6658278/93‑1 (MQ=255) aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGaa > 2:1413406/1‑93 (MQ=255) tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAAc > 2:6072275/1‑93 (MQ=255) tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAAc > 1:6240871/1‑93 (MQ=255) gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACt < 1:1858189/93‑1 (MQ=255) tAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTa > 1:769790/1‑93 (MQ=255) aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAg < 2:3930457/93‑1 (MQ=255) aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAg < 1:7242985/93‑1 (MQ=255) aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAg > 1:4539520/1‑93 (MQ=255) aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAg < 1:2142060/93‑1 (MQ=255) aCGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCAGGGC‑CCTCAAGGGGAGAAAACTTAgg > 1:16063/1‑93 (MQ=255) aCGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAgg > 1:1213898/1‑93 (MQ=255) tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGcc > 2:4290977/1‑93 (MQ=255) tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGcc < 2:5047279/93‑1 (MQ=255) tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGcc > 2:5215680/1‑93 (MQ=255) tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGcc < 2:1145423/93‑1 (MQ=255) aaTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCct < 1:4167935/93‑1 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCctc > 2:1955670/1‑93 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCctc < 2:4005295/93‑1 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCctc < 1:4588165/93‑1 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCctc < 1:2804720/93‑1 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCctc > 1:4908951/1‑93 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGCACATATATGGCAAAAGCCCGGAAAAA‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAATGCctc > 2:6733661/1‑93 (MQ=255) ttGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCctct > 1:5725900/1‑93 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 2:1246648/93‑1 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 2:237985/93‑1 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 2:2562609/93‑1 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 2:368421/93‑1 (MQ=255) gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt < 1:5248299/93‑1 (MQ=255) gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt < 2:2664266/93‑1 (MQ=255) gtcagtcaGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt > 1:5038275/1‑93 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg < 1:1784803/93‑1 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg < 1:1297772/93‑1 (MQ=255) cagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATgg < 1:2012237/93‑1 (MQ=255) gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc < 1:4038328/93‑1 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt > 2:2827864/1‑93 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt > 1:3801659/1‑93 (MQ=255) tcagGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGGGAAAACTTAGGGGCTCTATGGGCt > 1:6527962/1‑93 (MQ=255) agGGAGTGGCTGGTCCATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc > 2:6441802/1‑93 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc > 1:3701852/1‑93 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCCAc > 1:4709057/1‑93 (MQ=255) gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa > 2:3648854/1‑93 (MQ=255) gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa > 2:3157907/1‑93 (MQ=255) gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa > 1:5612325/1‑93 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCC‑G‑GCTTCGCA‑GGTCCCTCAAGGGGGGAAAACTTAGGGCCTCTATGGGCTACaaa > 1:6648032/1‑93 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa < 1:3921276/93‑1 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa < 1:946153/93‑1 (MQ=255) gAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAA‑CCGG‑GCTTCGCAGGGC‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa > 1:5829414/1‑93 (MQ=255) aGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAg > 2:3458358/1‑93 (MQ=255) cTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt < 2:6353838/93‑1 (MQ=255) tGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa < 1:2435657/93‑1 (MQ=255) tGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa < 2:5844472/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 2:741027/93‑1 (MQ=255) aCATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg > 2:569953/1‑93 (MQ=255) aCATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg < 2:6223907/93‑1 (MQ=255) cATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg < 2:6993193/93‑1 (MQ=255) tatatGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa < 1:2244573/93‑1 (MQ=255) tatatGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa < 1:3214330/93‑1 (MQ=255) tatGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg > 1:3147509/1‑93 (MQ=255) ggCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtt < 1:6866911/93‑1 (MQ=255) ggCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtt < 1:7080039/93‑1 (MQ=255) gCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtta < 2:5476560/93‑1 (MQ=255) cAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttat < 2:5388990/93‑1 (MQ=255) aaaaGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt > 1:5535530/1‑93 (MQ=255) aaaaGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt > 2:4167343/1‑93 (MQ=255) aaaaGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt > 2:2454424/1‑93 (MQ=255) aaGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttt < 2:804487/93‑1 (MQ=255) aGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttta < 2:4809044/93‑1 (MQ=255) gCCCGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat > 1:6119491/1‑93 (MQ=255) cccGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt < 1:5375366/93‑1 (MQ=255) ccGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg < 2:2133588/93‑1 (MQ=255) ccGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg < 2:6880842/93‑1 (MQ=255) ccGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg > 2:6103386/1‑93 (MQ=255) cGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGt < 2:6050192/93‑1 (MQ=255) cGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGt > 1:6459262/1‑93 (MQ=255) cGGAAAAT‑CCGG‑GCTTCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGt < 2:3300779/93‑1 (MQ=255) ggcttCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAg > 1:2677529/5‑93 (MQ=255) ggcttCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAg > 1:5150964/5‑93 (MQ=255) ggcttCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAg < 1:1154996/89‑1 (MQ=255) gcttCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGc < 2:3048222/90‑1 (MQ=255) gcttCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGc > 2:7306014/4‑93 (MQ=255) cttCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCg < 1:1482368/91‑1 (MQ=255) tCGCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGat < 1:835016/93‑1 (MQ=255) gCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGatat > 1:191796/1‑93 (MQ=255) gCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGatat < 2:4415005/93‑1 (MQ=255) gCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGatat < 1:2548976/93‑1 (MQ=255) gCA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGatat > 1:2301319/1‑93 (MQ=255) cA‑GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATg > 1:3059417/1‑93 (MQ=255) | TAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑T‑GC‑TCGCA‑GGT‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG > NC_000913/3957470‑3957645 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |